CGDB Gene Information

Tag Content
CGDB ID CGD-GaG-020965
Uniprot Accession E1C8E2; E1C8E2; E1C8E2_CHICK
Protein Name Uncharacterized protein
Gene Name PER3
Ensembl Information ENSGALT00000000797; ENSGALP000000007
Organism Gallus gallus
NCBI Taxa ID 9031
Circadian Information
Evidence Phase Amplitude
(FOLD)		 Sentence Tissue/Cell Data type PMID
Peak Trough External
condition
Small-scale ZT 0 ZT 12 LD 5.00 The mRNA level of Per3 is under circadian control in the chicken pineal gland. pineal gland Small-scale [1]
Small-scale ZT 15 ZT 9 LD 6.00 Per3 and Cry1 are rhythmic in the retina. duodenum Small-scale [1]
Protein Sequence
(Fasta)		 MVMIQEIKKC LPEEKRSSSK PSTISALNYA LRCVQQVRAN NEFFQALNDR RMFQTDVMTY 60
STEELVTLAS ERTPKNNDTF VAVFSLLSGR IVHISEQAAS ILNYKKQVLE SSRFVELLAP 120
QDASVFYAHT DQSHLPLWNT ESQTASLYEY AQVKSFFCRI RGGKDQEQEM HWYPFRITPY 180
LVHVCTSVHV DAESCCLALA EKIHSGYEAP RIPMDKRIFT TTHTPGCVFL EIDDRAVPLL 240
GYLPQDLIGT SILMYLHPED RPLMIAIHRK ILKFAGQPPF EYLPIRFCTQ NGDYVILDTS 300
WSSFVNPWSR KVAFIIGRHK VRTSPLNEDV FATRSQEASS VEKEIKELQG QIYKLLLQPV 360
HSNVSSGYGS LGSSGSYEHY ISVASSSDSN GNCAEETQEP MTLQQVCADV NRIKNLGQQL 420
YIASRSKPQN GNDQPMSSEM LEGKRHNASC FLPTLGSDST EELGHALYDD LKKTPHVPSY 480
QQINCVDSII RYLESCSIPL LKRKCKSSTN TSSSSSEGDK KNQQRLQEIK ALGVFADQEE 540
VLKKQTNEGI VGAPLPDLTL SNRSPSVVSA TSQCSYSSTI VHVPHPESEV TTVENTPVGN 600
EHIELPPPNA QNLVAVTEGL KPVGLTKETL SAHTQKEEQN YVDKFRRRIL LSPLRTYLQQ 660
DGRSNIGRFC DQGSSPSKEM AQASCKNGKK GKFKHQKPQR RSSDRRSCSK NRNGLPCEKR 720
RIQKQSLSPS EVSHLSSSSM NFFPPVGYPV YSDALSSFPA SSVGEELAIC SSKPEPTSLS 780
QLCCGAPSFP GLSSPNIGMF MAVFFHSFPI YTQVPQYAFL PSTQNVYLPS YPCTAVPPAP 840
PPPAPSPIAP NSVDQSCPAS SATSTEEQLE GQHGRALQLS SSRSSSPLQL NLLQEELPES 900
AEPSLSTDVK ACAEANCDNS LEDSGNSASS HCASSECTDR LLHEDSQSGT GSAASGSGLA 960
LSSSLGSHSC ETSGGGTAET DQEAKEKETP HKSKYESAWV MMDHTPEQVL MTYQMPNRVK 1020
EEVLKEDMEK LIVMRKQQPW FSDRQKRELA EVHTWIRTQT VPLQINTQGC VTCDIREATC 1080
ESAMADDNME NKGKPLPVLE H 1101
Sequence Source Uniprot/ENA
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-AnP-057114Anas platyrhynchos72.33 0.00e+00 1239.2
CGD-AsT-029801Aspergillus terreus33.33 4.43e-01 33.11
CGD-AsM-051238Astyanax mexicanus51.49 5.00e-179 625.2
CGD-CaJ-041907Callithrix jacchus42.59 0.00e+00 741.9
CGD-CaF-038549Canis familiaris45.51 0.00e+00 811.6
CGD-CaP-050028Cavia porcellus42.48 2.00e-169 593.2
CGD-ChR-070732Chlamydomonas reinhardtii34.55 1.02e-01 34.27
CGD-ChS-042175Chlorocebus sabaeus42.47 0.00e+00 779.6
CGD-ChH-060322Choloepus hoffmanni50.52 2.00e-111 400.6
CGD-DaR-072762Danio rerio43.29 0.00e+00 800.8
CGD-DaN-060659Dasypus novemcinctus59.03 0.00e+00 657.5
CGD-DiO-049550Dipodomys ordii51.12 3.00e-161 565.8
CGD-DrM-071117Drosophila melanogaster29.87 1.30e-25 115.5
CGD-EqC-051045Equus caballus46.54 0.00e+00 827
CGD-FiA-032827Ficedula albicollis67.12 0.00e+00 1439.1
CGD-GoG-059542Gorilla gorilla40.21 0.00e+00 696
CGD-HoS-021431Homo sapiens (Human)45.92 0.00e+00 720.7
CGD-HoV-057815Hordeum vulgare22.78 6.81e-01 31.57
CGD-IcT-051943Ictidomys tridecemlineatus46.11 0.00e+00 716.1
CGD-LaB-069618Laccaria bicolor s238n h8229.17 2.10e-02 36.58
CGD-LaC-038253Latimeria chalumnae45.3 0.00e+00 847.8
CGD-LeO-053510Lepisosteus oculatus44.38 1.00e-173 607.4
CGD-LoA-064706Loxodonta africana45.7 0.00e+00 789.6
CGD-MaE-031352Macropus eugenii57.11 2.00e-154 543.1
CGD-MeT-058493Medicago truncatula36.73 1.31e-01 34.65
CGD-MeG-072597Meleagris gallopavo70.9 0.00e+00 1525.4
CGD-MiM-058960Microcebus murinus42.2 4.00e-170 595.5
CGD-MoD-067747Monodelphis domestica47.82 0.00e+00 917.1
CGD-MuM-021078Mus musculus (Mouse)44.57 0.00e+00 793.1
CGD-MuP-062621Mustela putorius furo55.41 1.00e-175 614
CGD-MyL-055612Myotis lucifugus42.9 1.00e-179 626.7
CGD-NoL-069268Nomascus leucogenys42.93 0.00e+00 780.8
CGD-OrN-041249Oreochromis niloticus54.01 0.00e+00 658.3
CGD-OrG-056790Oryza glaberrima40 1.00e+00 31.96
CGD-OrG-063901Oryza glumaepatula28.28 7.40e-02 33.88
CGD-OrI-068196Oryza indica41.86 2.72e-01 33.88
CGD-OrL-069692Oryzias latipes50.49 0.00e+00 651.4
CGD-OtG-043281Otolemur garnettii46.11 0.00e+00 835.1
CGD-OvA-022195Ovis aries42.18 0.00e+00 741.5
CGD-PaT-063745Pan troglodytes44.17 0.00e+00 801.6
CGD-PaA-041667Papio anubis43.47 0.00e+00 790.4
CGD-PoF-071349Poecilia formosa43.74 0.00e+00 649.8
CGD-PoA-060690Pongo abelii42.61 0.00e+00 770
CGD-PrC-048229Procavia capensis37.18 2.00e-166 583.2
CGD-PtV-052486Pteropus vampyrus56.48 0.00e+00 705.7
CGD-RaN-021797Rattus norvegicus45.63 0.00e+00 827.8
CGD-SaH-071279Sarcophilus harrisii48.52 0.00e+00 900.2
CGD-SuS-028663Sus scrofa41.94 0.00e+00 701.8
CGD-TaG-047964Taeniopygia guttata68.45 0.00e+00 1459.5
CGD-TaR-032238Takifugu rubripes41.59 0.00e+00 758.1
CGD-TaS-050246Tarsius syrichta59.21 1.00e-172 603.6
CGD-TeN-064311Tetraodon nigroviridis51.89 0.00e+00 673.7
CGD-TuB-071016Tupaia belangeri42.77 1.00e-174 610.5
CGD-TuT-040951Tursiops truncatus42.6 0.00e+00 718
CGD-XeT-062261Xenopus tropicalis48.88 0.00e+00 794.7
CGD-XiM-036627Xiphophorus maculatus44.42 0.00e+00 644
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
Gene Ontology

GO:0032922--P:circadian regulation of gene expression
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0045187--P:regulation of circadian sleep/wake cycle, sleep
Interpro

IPR000014--PAS
IPR013655--PAS_fold_3
IPR015524--Per_circ_prot_3
IPR022728--Period_circadian-like_C
PROSITE

PS50112--PAS
Pfam

PF08447--PAS_3
PF12114--Period_C
SMART

SM00091--PAS