CGDB Gene Information

Tag Content
CGDB ID CGD-CaJ-041907
Ensembl Accession ENSCJAP00000045478.1
Protein Name PER3
Ensembl Information ENSCJAG00000000288; ENSCJAT00000061568
Organism Callithrix jacchus
NCBI Taxa ID 9483
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 12 ZT 0 LD >10 Predicted from orthologs Q65ZG8
ZT 15 ZT 9 LD 6 duodenum Predicted from orthologs E1C8E2
ZT 0 ZT 12 LD 5 pineal gland Predicted from orthologs E1C8E2
ZT 15 ZT 3 LD 2 blood Predicted from orthologs P56645
CT 16 CT 4 DD2 2.7 human HaCaT keratinocytes Predicted from orthologs P56645
ZT 4 ZT 21 LD 3.5 human HaCaT keratinocytes Predicted from orthologs P56645
ZT 8 ZT 0 LD 4.6 brown adipose tissue Predicted from orthologs O70361
ZT 8 ZT 0 LD 2.46 epididymal white adipose tissue Predicted from orthologs O70361
ZT 12 ZT 0 LD 10 femur vertebra Predicted from orthologs O70361
ZT 8 ZT 4 LD 5.2 heart Predicted from orthologs O70361
ZT 12 ZT 0 LD 35 jejunum Predicted from orthologs O70361
CT 9 CT 21 DD1 2 SCN Predicted from orthologs O70361
ZT 8 ZT 16 LD 2.5 SCN Predicted from orthologs O70361
CT 15 CT 3 DD1 2 testis Predicted from orthologs O70361
CT 15 CT 3 DD1 4 liver Predicted from orthologs O70361
ZT 8 ZT 0 LD 14 lumbar vertebra Predicted from orthologs O70361
CT 0 CT 12 DD2 8.8 NIH-3T3 cells Predicted from orthologs O70361
ZT 8 ZT 0 LD 23 liver Predicted from orthologs O70361
ZT 6 ZT 18 LD 4 muscle Predicted from orthologs W5PL09
ZT 12 ZT 0 LD 25 abdominal adipose tissue Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 2.3 basolateral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 12 ZT 0 LD 5 entral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 4.5 hippocampus Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 14 nucleus accumbens core Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 5 nucleus accumbens shell Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 8 prefrontal cortex Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 6 SCN Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 2 ventral tegmental area Predicted from orthologs Q8CJE2
Descriptionperiod circadian clock 3 [Source:HGNC Symbol;Acc:HGNC:8847](View all)
Protein Sequence
(Fasta)		 MEPCGDLETP LGEPPGPGGR AAEDEALGED SGEWWSPEFH LQRKLADPSH SEQQDRSRVL 60
EELTMIVQEM KKYFPSERRN KPSTLDALNY ALHCVHSVQA NSEFFQILSQ NGAPQADVTM 120
YSLEELATIA SEHTSKNTDT FVAVFSFLSG RLVHISEQAA LILNRKKDVL ASSHFVDLLA 180
PQDVRVFYAY TARAQLPFWN NWTQRAAPRY ECAPVKPFFC RIRGGEDREQ EKRPSPFRII 240
PYLIHVHHPA QPESESEPCC LTVVEKIHSG YEAPRIPVNK RIFTTTHTPG CVFLEVDEKA 300
VPLLGYLPQD LIGTSILTYL HPEDRSLMVA IHQKVLKYAG HPPFEHSPIR FCTQNGDYII 360
LDSSWSSFVN PWTRKVSFII GRHKVRTSPL NEDVFATKIK KMNNNDKDIT ELQEQIYKLL 420
LQPVHVSVSS GYGSLGSSGS QEQLVSMASS SESSGHCAEE TKAEQMTLQQ VYASVNKIKN 480
RGQQLYIESR TKSSVKPVTG MCAELNGGGE YKACTSFHQI LKNNSMYAEP HEDLRNDEHS 540
PSYQQINCID SVIRYLKSYN IPALKRKCIS CTNTTSSSSE EDKQNHKADD VQALQAPAGL 600
QIPVIPKPEM PANGRSTDTG GGAPQILSTT VLSLGSGMSQ CGYSSTIVHI PPAETARDAT 660
LMCEPRTLNM RPAPLTSEEF KHVGLTAAVL SAHTQKEEQN YVDKFREKIL SSPYSSYLQQ 720
ESRSKAKYSY FQGDSTFKQT WSACCRKRKH KRKKMLEPPG SSSSNAGSGH RRGAHLNAQP 780
CCPSVASSPH SSGPTFPLAA MVPSQAPYLV PAFPLPAVTC PGREYAVPGT APEVLPGPSS 840
SKDQQTCLGF PSPCLDTFMT VFLPDPSVCP LLSPSFFPCP FLGETASSAI LPSMSAMTPN 900
LDPPPSVTNQ RREEEKWEAQ RKGHPFISSR SSSPLQLNLL QEEMPRPSES PDEMCPQAEY 960
CVIDNSGSEG SPAATPALFT GSSPRETPSH PTAGVLSPGS PPRETPSHPT ASVLSTGSPP 1020
REAPSHPSAS ELSPGSPPRE TPSHPTASIL SPESPPRETP SGTGSAASGS SDCSIYFTGS 1080
AYSSEISQNG QQSQDIQKKE IFPNVAEESI WRMIQQTPEC ILMTYQVPER VKEVVLREDL 1140
ERLESMKQQQ PQFSHGQQEE LAKVYNWIQS QAIPQEIDVQ ACVTCESADS GDDAATSSGQ 1200
AEDSS 1205
Nucleotide Sequence
(Fasta)		 GACTGCAAAG TGAGCGAGAA GCAGGCAGCG GGCCGTCCCA GCAGGACATG GAGCCCTGCG 60
GAGACCTCGA GACGCCCCTC GGGGAACCTC CTGGCCCTGG GGGACGGGCA GCTGAGGACG 120
AGGCCCTGGG CGAAGACTCT GGGGAGTGGT GGAGCCCCGA GTTCCATCTG CAGAGAAAAT 180
TGGCGGACCC CAGCCACAGT GAACAGCAAG ATCGAAGCAG AGTTTTGGAA GAACTTACCA 240
TGATTGTCCA AGAAATGAAA AAATACTTCC CCTCGGAGAG ACGCAATAAA CCAAGCACTC 300
TAGATGCCCT CAACTATGCC CTCCACTGTG TCCACAGCGT GCAAGCAAAC AGTGAGTTTT 360
TCCAGATTCT CAGTCAAAAT GGAGCACCTC AGGCAGATGT GACCATGTAC AGTCTTGAGG 420
AGCTGGCCAC TATTGCTTCA GAACACACTT CCAAAAACAC AGATACCTTT GTGGCAGTAT 480
TTTCATTTCT GTCTGGAAGG TTAGTGCACA TTTCTGAACA GGCTGCTTTG ATCCTGAATC 540
GTAAGAAAGA TGTCCTGGCA TCTTCTCACT TTGTTGACCT GCTTGCCCCT CAAGACGTGA 600
GGGTGTTCTA TGCATACACT GCCAGAGCTC AGCTTCCCTT CTGGAACAAC TGGACCCAAA 660
GAGCAGCTCC ACGATATGAA TGTGCTCCGG TGAAACCCTT TTTCTGCAGG ATCCGTGGAG 720
GTGAAGACAG AGAGCAAGAG AAGCGTCCCT CCCCCTTCCG GATCATCCCT TATCTGATTC 780
ATGTCCATCA CCCTGCCCAG CCAGAATCGG AATCAGAGCC TTGCTGTCTC ACTGTGGTTG 840
AAAAGATTCA CTCTGGTTAT GAAGCTCCTC GAATCCCAGT GAATAAAAGA ATCTTTACCA 900
CAACACACAC CCCAGGGTGT GTTTTTCTTG AAGTAGATGA AAAAGCAGTG CCTTTGCTGG 960
GTTACCTACC TCAGGACCTG ATTGGAACAT CAATCTTAAC CTACCTGCAC CCTGAAGATC 1020
GTTCTCTGAT GGTTGCCATA CACCAAAAAG TCTTGAAGTA TGCAGGGCAT CCTCCCTTTG 1080
AACATTCTCC CATTCGATTC TGTACTCAAA ATGGAGACTA CATCATTCTG GATTCCAGTT 1140
GGTCCAGCTT CGTGAATCCC TGGACCAGGA AGGTTTCTTT CATCATTGGT CGGCATAAAG 1200
TTCGAACGAG CCCACTAAAT GAGGATGTTT TTGCTACCAA AATAAAAAAG ATGAACAATA 1260
ATGACAAAGA CATAACAGAA TTACAAGAAC AAATTTACAA ACTTCTCTTA CAGCCAGTTC 1320
ACGTGAGTGT GTCCAGCGGC TATGGGAGCC TGGGAAGCAG CGGGTCACAG GAGCAGCTTG 1380
TCAGCATGGC CTCCTCCAGT GAGTCCAGTG GGCACTGCGC GGAGGAGACA AAGGCGGAGC 1440
AGATGACCTT GCAGCAGGTC TATGCCAGTG TCAACAAAAT TAAGAATCGA GGTCAGCAGC 1500
TCTACATTGA GTCAAGGACC AAATCATCAG TCAAGCCAGT GACGGGGATG TGCGCAGAAC 1560
TGAATGGTGG TGGTGAGTAT AAGGCCTGTA CTTCCTTCCA CCAAATATTG AAAAATAATA 1620
GCATGTACGC TGAGCCTCAC GAGGATCTGA GGAACGACGA GCACAGCCCA TCCTATCAAC 1680
AGATTAACTG TATCGACAGC GTCATCAGAT ACCTGAAGAG CTACAACATT CCAGCTTTGA 1740
AAAGAAAGTG TATCTCCTGT ACAAATACAA CTTCTTCATC CTCAGAAGAA GACAAACAGA 1800
ACCACAAGGC AGATGATGTC CAGGCCTTAC AGGCACCAGC TGGTTTGCAA ATCCCAGTCA 1860
TACCTAAGCC AGAAATGCCA GCAAATGGAC GGTCCACAGA CACAGGAGGA GGAGCTCCAC 1920
AGATCCTGTC CACGACAGTG CTGAGCTTGG GGTCGGGCAT GAGCCAGTGT GGTTACAGCA 1980
GCACCATTGT CCACATCCCA CCCGCAGAGA CAGCCAGGGA TGCCACCCTC ATGTGTGAGC 2040
CCAGGACCCT GAACATGCGG CCAGCCCCTT TGACCTCGGA AGAATTTAAA CACGTGGGAC 2100
TCACTGCGGC TGTTCTGTCA GCACATACCC AGAAGGAAGA GCAGAATTAT GTTGATAAAT 2160
TCCGAGAAAA GATCCTGTCA TCACCCTATA GTTCCTATCT TCAGCAAGAA AGCAGGAGCA 2220
AAGCTAAATA TTCATATTTT CAAGGAGATT CGACTTTCAA GCAGACTTGG TCGGCCTGCT 2280
GCAGGAAACG GAAGCACAAG CGGAAGAAGA TGCTGGAGCC ACCGGGCAGC AGCAGCTCTA 2340
ACGCAGGCTC CGGTCACCGC AGGGGAGCGC ATCTGAACGC ACAGCCCTGC TGCCCCTCCG 2400
TGGCCTCTTC TCCACACTCC TCAGGCCCAA CCTTCCCACT TGCTGCCATG GTACCCAGCC 2460
AGGCCCCTTA TCTCGTCCCG GCGTTTCCCC TCCCAGCTGT GACCTGTCCC GGAAGAGAAT 2520
ATGCCGTTCC CGGAACTGCA CCGGAAGTCC TGCCTGGGCC ATCCTCATCC AAGGACCAGC 2580
AGACTTGCCT AGGTTTCCCT TCTCCTTGCT TGGATACTTT TATGACCGTT TTCCTGCCTG 2640
ACCCCTCTGT CTGCCCTCTG TTGTCTCCAT CGTTCTTTCC ATGTCCATTC CTGGGGGAGA 2700
CAGCCTCTTC TGCAATATTA CCCTCAATGT CAGCAATGAC TCCAAACCTG GACCCACCCC 2760
CTTCAGTCAC CAACCAAAGG AGAGAGGAGG AAAAGTGGGA AGCACAAAGA AAGGGGCACC 2820
CATTCATTTC CTCAAGGAGC AGTTCGCCCT TGCAGTTAAA CTTACTTCAG GAAGAGATGC 2880
CCAGACCCTC TGAATCTCCA GATGAGATGT GCCCACAAGC TGAGTATTGT GTTATAGACA 2940
ACAGTGGCAG TGAGGGCAGT CCTGCTGCTA CCCCTGCACT GTTCACAGGA TCATCTCCCA 3000
GGGAGACTCC ATCGCATCCT ACTGCCGGTG TGCTGTCCCC AGGGTCACCT CCCAGGGAGA 3060
CTCCATCGCA TCCTACTGCC AGCGTGCTGT CCACAGGGTC ACCTCCCAGG GAGGCACCAT 3120
CCCATCCTTC TGCCAGCGAG CTGTCCCCAG GGTCACCTCC CAGGGAGACT CCATCGCATC 3180
CTACTGCCAG CATACTGTCC CCGGAGTCAC CTCCCAGGGA GACTCCATCC GGAACTGGTT 3240
CTGCAGCATC AGGAAGCAGT GACTGCAGTA TATACTTTAC TGGTAGTGCT TATTCTTCTG 3300
AAATCTCTCA AAATGGGCAG CAATCTCAGG ATATACAGAA AAAAGAAATA TTTCCCAATG 3360
TCGCCGAAGA GTCCATCTGG AGAATGATAC AACAGACACC TGAGTGCATT CTCATGACAT 3420
ATCAGGTACC TGAGAGGGTT AAAGAAGTTG TCCTAAGAGA AGACCTAGAA AGGCTAGAGA 3480
GTATGAAGCA GCAGCAGCCC CAGTTTTCTC ATGGGCAGCA GGAGGAGCTG GCCAAGGTGT 3540
ATAATTGGAT TCAAAGCCAG GCTATCCCTC AGGAAATTGA CGTTCAAGCC TGTGTCACTT 3600
GCGAAAGTGC AGATTCAGGT GATGATGCAG CCACATCCAG TGGTCAGGCA GAAGACAGCA 3660
GCTGA 3665
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-CaE-021686Caenorhabditis elegans29.17 5.20e-15 80.88
CGD-GaG-020965Gallus gallus42.59 0.00e+00 741.9
CGD-HoS-021431Homo sapiens (Human)78.47 0.00e+00 1796.6
CGD-MuM-021078Mus musculus (Mouse)51.6 0.00e+00 1029.2
CGD-OvA-022195Ovis aries53.53 0.00e+00 1081.2
CGD-RaN-021797Rattus norvegicus54.7 0.00e+00 1088.9
Gene Ontology

GO:0005515--protein binding
GO:0032922--circadian regulation of gene expression
GO:0045187--regulation of circadian sleep/wake cycle, sleep
GO:0000122--negative regulation of transcription from RNA polymerase II promoter
GO:0031625--ubiquitin protein ligase binding
GO:0019900--kinase binding
GO:0007623--circadian rhythm