CGDB Gene Information

Tag Content
CGDB ID CGD-TuB-071016
Ensembl Accession ENSTBEP00000003120.1
Protein Name PER3
Ensembl Information ENSTBEG00000003546; ENSTBET00000003595
Organism Tupaia belangeri
NCBI Taxa ID 37347
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 15 ZT 9 LD 6 duodenum Predicted from orthologs E1C8E2
ZT 0 ZT 12 LD 5 pineal gland Predicted from orthologs E1C8E2
ZT 8 ZT 0 LD 4.6 brown adipose tissue Predicted from orthologs O70361
ZT 8 ZT 0 LD 2.46 epididymal white adipose tissue Predicted from orthologs O70361
ZT 12 ZT 0 LD 10 femur vertebra Predicted from orthologs O70361
ZT 8 ZT 4 LD 5.2 heart Predicted from orthologs O70361
ZT 12 ZT 0 LD 35 jejunum Predicted from orthologs O70361
CT 9 CT 21 DD1 2 SCN Predicted from orthologs O70361
ZT 8 ZT 16 LD 2.5 SCN Predicted from orthologs O70361
CT 15 CT 3 DD1 2 testis Predicted from orthologs O70361
CT 15 CT 3 DD1 4 liver Predicted from orthologs O70361
ZT 8 ZT 0 LD 14 lumbar vertebra Predicted from orthologs O70361
CT 0 CT 12 DD2 8.8 NIH-3T3 cells Predicted from orthologs O70361
ZT 8 ZT 0 LD 23 liver Predicted from orthologs O70361
ZT 6 ZT 18 LD 4 muscle Predicted from orthologs W5PL09
ZT 12 ZT 0 LD 25 abdominal adipose tissue Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 2.3 basolateral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 12 ZT 0 LD 5 entral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 4.5 hippocampus Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 14 nucleus accumbens core Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 5 nucleus accumbens shell Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 8 prefrontal cortex Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 6 SCN Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 2 ventral tegmental area Predicted from orthologs Q8CJE2
Descriptionperiod circadian clock 3 [Source:HGNC Symbol;Acc:HGNC:8847](View all)
Protein Sequence
(Fasta)		 TAGKKPADLK GQAPKDQAPG RWAEGLELWS PEFQLQRTSL DDSHSEQQDW KRVSEELVMV 60
VQEMKKYFPS ERHKKPSTLD ALHYALRCVH SVQANSEFFQ ILSPNGTPQA DVTKYSLEEL 120
ATIASEHTSK NTDTFVAVFS FLSGRLVHIS EQATLILNCK KDFLASSHFV DLLAPQDVRV 180
FYMHTAHAQL PFWNNWTRRA ASQYEYAPVK SFFCRIHGGE DREKRKYYSP FRIIPYLIHV 240
HSSAQPEWEA CCLTLVEKIH SGYEXXXXXX XXXXXXXXXX XXXXXXXXXX XAVPLLGYLP 300
QDLIGTSILK YLHPEDRSLM VALHQKILKY VGHPPFEHSP IRFCTQNGDY IILDSSWSSF 360
VNPWSRKVSF IIGRHKVRTG PLNEXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXPVHASA 420
SSGYGSLGSS GSQEHHISVA SSSECSGHGA EEPQKEPMTL KQVYASVNKI KNLGQQLYIE 480
SMRSSIKPVX XXXXXXXXXX XXXXXXXEQK ASSSLQTLQN NSMYTEPYED LRKDQHSPSY 540
QQINCIDSVI RYLKSYXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXVSQIPAI 600
PESKMPTNGQ STDAEGGVPR TMSTTALNLG SGISQYSYSS TIVHVPPVES AENATLACEP 660
WTLNTQPAPL ASEELKHVGL TKAVLSAHTQ KEEQNYVDKF REKILSSPYI SYLHQESRSK 720
AKYSYVQGES TSKQTSSAGY KKGKHKRKKL PVLWDSNSQS PTSVPSRGEL QNMQPWDPPA 780
ASSPHASGLA FPSAMMIPSQ VPYLIPAFPL PSMSSLEREH AASGAVLECL PKPLLPSGLQ 840
SFPAFPSPNL DTFMTIFLHG PAISPLSSPS FSPYSFLGAT GSPDMPPSVS TVTPDLEPPF 900
SGINQRRVQE KWETQSEDHP FINSRSSSPL QLNLLQEEMP RSSESSDWMK KDTCLEYQHV 960
TGNRGNKIHH PAAGKLSAVL HKESPSGTGS TASXXXXXXX XXXXXXXXXX XXXXXXXXXX 1020
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXDKEVV LKDDLQKLER MRQQQPKFSL 1080
GQKEELAKVR SWIQSQTLPQ EMGIQGCDAC ENKNSVDAAE SSGQDPAEDS S 1131
Nucleotide Sequence
(Fasta)		 ACGGCCGGCA AGAAACCTGC GGACCTCAAG GGACAGGCGC CCAAGGACCA GGCGCCGGGA 60
CGCTGGGCCG AAGGGCTGGA GCTGTGGAGC CCGGAGTTCC AGCTGCAGAG GACAAGCCTG 120
GACGACAGTC ACAGTGAACA GCAAGATTGG AAGAGAGTTT CTGAAGAACT TGTAATGGTT 180
GTGCAAGAAA TGAAAAAATA CTTCCCGTCG GAGAGACACA AGAAACCGAG TACTCTGGAC 240
GCCCTCCACT ATGCCCTGCG CTGTGTGCAC AGTGTGCAAG CAAACAGTGA GTTTTTCCAG 300
ATTCTCAGTC CAAACGGAAC ACCTCAGGCA GATGTGACCA AGTACAGTCT TGAGGAGCTG 360
GCCACTATTG CATCAGAACA CACTTCCAAA AACACAGATA CCTTTGTGGC AGTGTTCTCA 420
TTTCTGTCTG GAAGGTTAGT GCACATTTCT GAACAGGCTA CTTTGATCCT GAACTGTAAG 480
AAAGATTTCT TGGCATCTTC TCACTTTGTT GACCTGCTTG CTCCTCAAGA TGTGAGGGTG 540
TTCTACATGC ACACTGCCCA CGCTCAGCTT CCCTTCTGGA ACAACTGGAC CCGAAGAGCT 600
GCATCACAGT ATGAATATGC TCCAGTCAAA TCCTTTTTCT GCAGGATCCA TGGAGGTGAA 660
GACAGAGAGA AAAGGAAATA TTACTCCCCA TTCCGGATTA TCCCCTATTT GATTCATGTA 720
CATAGTTCTG CCCAACCAGA ATGGGAAGCT TGTTGTCTTA CACTGGTTGA GAAGATCCAC 780
TCTGGTTATG AAGNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 840
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNAGCAGTGC CTTTGCTGGG TTACCTACCT 900
CAGGATCTGA TCGGAACATC AATCTTAAAG TACTTGCACC CAGAAGATCG TTCTCTGATG 960
GTTGCCTTAC ACCAAAAAAT CTTGAAGTAT GTGGGCCATC CTCCCTTTGA ACATTCACCC 1020
ATTAGATTTT GTACTCAAAA CGGAGATTAC ATCATACTTG ATTCCAGTTG GTCCAGCTTT 1080
GTGAACCCCT GGAGCCGAAA GGTTTCTTTC ATCATCGGTC GGCATAAAGT TCGAACGGGT 1140
CCACTAAATG AAGNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1200
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNCCCGTTCA CGCGAGTGCT 1260
TCCAGTGGCT ATGGGAGCCT GGGCAGCAGC GGTTCCCAGG AGCATCACAT TAGCGTGGCA 1320
TCTTCCAGTG AGTGCAGCGG GCATGGTGCA GAGGAGCCGC AGAAGGAACC GATGACCTTG 1380
AAGCAGGTCT ACGCCAGTGT AAATAAAATT AAGAATCTAG GTCAGCAGCT CTACATTGAG 1440
TCGATGAGAT CATCAATCAA GCCAGTNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1500
NNNNNNNNNN NNNNNNNNNA TGAGCAGAAG GCCTCTTCTT CCTTGCAGAC ATTACAAAAC 1560
AATAGCATGT ACACTGAGCC TTATGAGGAT TTGAGGAAAG ATCAGCACAG CCCATCCTAT 1620
CAGCAGATAA ACTGTATTGA TAGCGTTATC AGATACCTGA AGAGCTATAN NNNNNNNNNN 1680
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1740
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNCGG TTTCTCAAAT CCCAGCTATA 1800
CCTGAATCAA AAATGCCAAC AAATGGACAG TCCACAGATG CCGAAGGAGG TGTCCCGCGG 1860
ACCATGTCCA CGACAGCACT GAACTTGGGC TCAGGCATAA GCCAGTACAG TTACAGCAGC 1920
ACCATTGTCC ATGTCCCGCC CGTGGAGTCA GCAGAAAATG CCACCCTAGC ATGTGAACCC 1980
TGGACCCTAA ACACACAGCC AGCTCCTTTG GCCTCAGAAG AACTGAAGCA CGTAGGACTT 2040
ACAAAGGCTG TTCTGTCAGC CCACACACAG AAGGAAGAAC AGAATTATGT TGATAAATTC 2100
CGGGAAAAGA TCCTGTCATC TCCCTACATC TCCTATCTTC ATCAGGAAAG CAGAAGCAAA 2160
GCTAAATATT CGTATGTTCA AGGAGAGTCT ACTTCCAAGC AAACCAGTTC AGCTGGTTAC 2220
AAGAAAGGGA AGCACAAGCG GAAGAAGCTG CCTGTGCTGT GGGACAGCAA CAGCCAGAGC 2280
CCTACCTCTG TTCCCAGCAG GGGCGAGCTT CAGAACATGC AACCCTGGGA CCCTCCTGCT 2340
GCCTCCTCTC CCCATGCCTC GGGCCTGGCA TTCCCGTCTG CCATGATGAT TCCCAGCCAG 2400
GTGCCGTATC TTATTCCAGC TTTCCCCCTG CCAAGTATGA GCTCTCTGGA AAGAGAACAT 2460
GCAGCCTCAG GAGCTGTGCT GGAATGTCTG CCTAAGCCAC TTCTGCCTAG TGGCCTGCAG 2520
TCTTTTCCAG CTTTCCCTTC TCCTAACCTG GATACTTTTA TGACCATTTT CCTGCATGGA 2580
CCTGCAATCT CTCCTCTGTC ATCACCGTCC TTCTCTCCAT ATTCATTTTT GGGAGCAACG 2640
GGCTCTCCTG ACATGCCACC CTCAGTATCA ACAGTGACTC CAGACCTGGA ACCACCATTT 2700
TCAGGCATCA ACCAAAGGAG AGTCCAGGAG AAATGGGAGA CGCAGAGTGA AGATCACCCA 2760
TTTATTAATT CACGGAGCAG CTCACCATTA CAGTTAAACT TACTTCAGGA AGAAATGCCC 2820
AGATCATCAG AATCTTCAGA TTGGATGAAA AAAGACACGT GCCTAGAATA TCAGCATGTT 2880
ACAGGCAACA GGGGGAACAA GATCCATCAT CCTGCTGCTG GCAAACTCTC TGCAGTACTT 2940
CACAAGGAAT CTCCATCTGG AACTGGTTCT ACAGCATCAG NNNNNNNNNN NNNNNNNNNN 3000
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 3060
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 3120
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNGGATAA AGAAGTTGTA 3180
CTAAAAGATG ACCTGCAGAA GTTAGAAAGG ATGAGGCAGC AACAGCCGAA GTTTTCTCTT 3240
GGGCAAAAGG AAGAGCTGGC TAAAGTGCGT TCTTGGATTC AAAGCCAGAC TCTCCCTCAA 3300
GAAATGGGCA TCCAAGGCTG TGACGCTTGT GAGAACAAAA ATTCAGTGGA TGCTGCAGAA 3360
TCCTCTGGGC AGGACCCAGC AGAAGACAGC AGTTGA 3396
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-GaG-020965Gallus gallus42.77 1.00e-174 610.5
CGD-MuM-021078Mus musculus (Mouse)55.46 0.00e+00 963.8
CGD-OvA-022195Ovis aries55.88 0.00e+00 964.9
CGD-RaN-021797Rattus norvegicus51.68 0.00e+00 1009.6
Gene Ontology

GO:0005515--protein binding
GO:0045187--regulation of circadian sleep/wake cycle, sleep
GO:0000122--negative regulation of transcription from RNA polymerase II promoter
GO:0031625--ubiquitin protein ligase binding
GO:0019900--kinase binding
GO:0007623--circadian rhythm