CGDB Gene Information


Tag Content
CGDB ID CGD-PoA-060690
Ensembl Accession ENSPPYP00000002238.2
Protein Name PER3
Ensembl Information ENSPPYG00000001930; ENSPPYT00000002305
Organism Pongo abelii
NCBI Taxa ID 9601
Circadian Information
Phase Amplitude
(FOLD)
Tissue/Cell Evidence
Peak Trough External
condition
ZT 12 ZT 0 LD >10 Predicted from orthologs Q65ZG8
ZT 15 ZT 9 LD 6 duodenum Predicted from orthologs E1C8E2
ZT 0 ZT 12 LD 5 pineal gland Predicted from orthologs E1C8E2
ZT 8 ZT 0 LD 4.6 brown adipose tissue Predicted from orthologs O70361
ZT 8 ZT 0 LD 2.46 epididymal white adipose tissue Predicted from orthologs O70361
ZT 12 ZT 0 LD 10 femur vertebra Predicted from orthologs O70361
ZT 8 ZT 4 LD 5.2 heart Predicted from orthologs O70361
ZT 12 ZT 0 LD 35 jejunum Predicted from orthologs O70361
CT 9 CT 21 DD1 2 SCN Predicted from orthologs O70361
ZT 8 ZT 16 LD 2.5 SCN Predicted from orthologs O70361
CT 15 CT 3 DD1 2 testis Predicted from orthologs O70361
CT 15 CT 3 DD1 4 liver Predicted from orthologs O70361
ZT 8 ZT 0 LD 14 lumbar vertebra Predicted from orthologs O70361
CT 0 CT 12 DD2 8.8 NIH-3T3 cells Predicted from orthologs O70361
ZT 8 ZT 0 LD 23 liver Predicted from orthologs O70361
ZT 6 ZT 18 LD 4 muscle Predicted from orthologs W5PL09
ZT 12 ZT 0 LD 25 abdominal adipose tissue Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 2.3 basolateral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 12 ZT 0 LD 5 entral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 4.5 hippocampus Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 14 nucleus accumbens core Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 5 nucleus accumbens shell Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 8 prefrontal cortex Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 6 SCN Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 2 ventral tegmental area Predicted from orthologs Q8CJE2
Descriptionperiod circadian clock 3 [Source:HGNC Symbol;Acc:HGNC:8847](View all)
Protein Sequence
(Fasta)
MPRGEAPGPG RRGAEDEALG EESGERWSPE FHLQRKLADS SHSEQQDRNR VSEELIMVVQ 60
EMKKYFPSER RNKPSTLDAL NYALRCVHSV QANSEFFQIL SQNGAPQADV TMYSLEELAT 120
VASEHTSKNT DTFVAVFSFL SGRLVHISEQ AALILNRKKD VLASSHFVDL LAPQDVRVFY 180
EHTARAQLPF WNNWPQRAAA RYECAPVKPF FCRIRGGEDR KQEKRHSPFR IIPYLIHVHR 240
PAQPQSESEP CCLTVVEKIH SGYEAPRIPV NKRIFTTTHT PGCVFLEVDE RAVPLLGYLP 300
QDLIGTSILS YLHPEDRSLM VAIHQKVLKY AGHPPFEHSP IRFCTQNGDY IILDSSWSSF 360
VNPWSRKVSF IIGRHKVRTS PLNEDVFATK IKKMNNNDKD ITELQEQIYK LLLQPVHVSV 420
SSGYGSLGSS GSQEQLVSIA SSSEASGHCV EETKAEQMTL QQVYASVNKI KNMGQQLYIE 480
SMTKSSFKPV TGTCTEPNGG GECKTFTSFH QTLKNNSVYT EPCEDLRNDE HSPSYQQINC 540
IDSVIRYLKS YNIPALKRKC ISCTNTTSSS SEEDKQNHKA DDVQALQAGL QIPAIPKSEM 600
PTNGRSIDTG GGAPQILSTA MLSLGSGISQ CGYSSTIVHV PPPETARDAT LFYEPWTVNM 660
QPAPLTSEEF KHVGLTAAVL SAHTQKEEQN YVDKFREKIL SSPYSSYLQQ ESRSKAKYSY 720
FQGDSTSKQT RSAGCRKGKH KRKKLPEPPD SSSSNAGSGP RRGAHQNAQP CCPSAASSPH 780
TSSPTFPPAA MVPSQAPYLV PAFPLPAATS PGREYAAPGT APEGPHGPPL PEGLQPYPAF 840
PFPYLDTFMT VFLPDPPVCP LLSPSFFPCP FLGATASSAI SPSMSSAMSP TLDPPSSVTN 900
QRREEEKWEA QSEGHPFITS RSSSPLQLNL LEEEMPRPSG SPDQMRRNMC PQAKYCVTGN 960
NGSESSPATT GALSTGSPPR ENPSHPTAST LSMGLPPSRT PSHPAASVLS MGSPPSESPS 1020
RTGSAASGSS DSSIYFTSSV YSSKISQNGQ QSQDVQKKET FPNVAEEPIW RMIRQTPERI 1080
LMTYQVPERV KEVVLKEDLE KLESMRQQQP QFSHGQKEEL AKVYNWIQSQ TITQEVDIQA 1140
CVTCENEDSA DGAATSCGQI LVEDSS 1166
Nucleotide Sequence
(Fasta)
CCCCGGAGCG TGGCACTTCC GAGCTACCCG CCTCCCCGGG CCCCAGCCCT CGGCGCGCGG 60
GAAAGTTGGG GCAGGGGTGA GGACCGCGCG GTCGGGGCGC CCCAGCCAGC CGGGTCTCTG 120
GCGTCGGACT GTCTGTTCCA CTTGTCCCTT GTCACCCTTG TCTCCTCCCC CTAGGCCGGA 180
CTCCTGAAAG TCGAGCGAGC TCCGGGTTTT GGAAATGCTG GAGGGAAAAG CTCCTCGGAG 240
ATGAGCGTGA CCCCCTGGCT CGTGGTGGCC GCCTGTTCTC ACTAACGCCA TGGCGGGGAC 300
CGGAGTGAGA AACCGGTGTC TGTCGCTTAC TGCAAAGTGA GCGAGAAGCA GGCTGCGGGC 360
CGTCCCAGCA CGACGTGGAG CCCCGCGGAG ACCTCGAGAT GCCTCGCGGG GAAGCTCCTG 420
GCCCTGGGAG ACGGGGGGCT GAGGACGAGG CCCTGGGCGA AGAATCGGGG GAGCGGTGGA 480
GCCCCGAGTT CCATCTGCAG AGGAAATTGG CGGACAGCAG CCACAGTGAA CAGCAAGATC 540
GAAACAGAGT TTCTGAAGAA CTTATCATGG TTGTCCAAGA AATGAAAAAA TACTTCCCCT 600
CGGAGAGACG CAATAAACCA AGCACTCTAG ATGCCCTCAA CTATGCTCTC CGCTGTGTCC 660
ACAGCGTGCA AGCAAACAGT GAGTTTTTCC AGATTCTCAG TCAAAATGGA GCACCTCAGG 720
CAGATGTGAC CATGTACAGT CTTGAGGAGC TGGCCACTGT TGCTTCAGAA CACACTTCCA 780
AAAACACAGA TACCTTTGTG GCAGTATTTT CATTTCTGTC TGGAAGGTTA GTGCACATTT 840
CTGAACAGGC TGCTTTGATC CTGAATCGTA AGAAAGATGT CTTGGCGTCT TCTCACTTTG 900
TTGACCTGCT TGCACCTCAA GACGTGAGGG TGTTCTATGA GCACACTGCC AGAGCTCAGC 960
TTCCTTTCTG GAACAACTGG CCCCAAAGAG CAGCTGCACG GTATGAATGT GCTCCGGTGA 1020
AACCTTTTTT CTGCAGGATC CGTGGAGGTG AAGACAGAAA GCAAGAGAAG CGTCACTCCC 1080
CATTCCGGAT CATCCCCTAT CTGATTCATG TACATCGCCC TGCCCAGCCA CAATCGGAAT 1140
CGGAACCCTG CTGTCTCACT GTGGTTGAAA AGATTCACTC TGGTTATGAA GCACCTCGGA 1200
TCCCGGTGAA TAAAAGAATC TTCACCACAA CACACACCCC AGGGTGTGTT TTTCTTGAAG 1260
TAGATGAAAG AGCAGTGCCT TTGCTGGGTT ACCTACCTCA GGACCTGATC GGAACATCGA 1320
TCCTAAGCTA CCTGCACCCT GAAGATCGTT CTCTGATGGT TGCCATACAC CAAAAAGTCT 1380
TGAAGTATGC AGGGCATCCT CCCTTTGAAC ATTCTCCCAT TCGATTTTGT ACTCAAAACG 1440
GAGACTACAT CATACTGGAT TCGAGTTGGT CCAGCTTTGT GAATCCCTGG AGCCGGAAGG 1500
TTTCTTTCAT CATTGGTCGG CATAAAGTTC GAACGAGCCC ACTAAATGAG GATGTTTTTG 1560
CTACCAAAAT TAAAAAGATG AACAATAATG ACAAAGACAT AACAGAATTA CAAGAACAAA 1620
TTTACAAACT TCTCTTACAG CCAGTTCACG TGAGCGTGTC CAGTGGCTAC GGGAGCCTGG 1680
GGAGCAGCGG GTCGCAGGAG CAGCTTGTCA GCATCGCCTC CTCCAGTGAG GCCAGCGGGC 1740
ACTGCGTGGA GGAGACGAAG GCGGAGCAGA TGACCTTGCA GCAGGTCTAT GCCAGTGTGA 1800
ACAAAATTAA GAATATGGGT CAGCAGCTCT ACATTGAGTC AATGACCAAA TCATCATTCA 1860
AGCCGGTGAC GGGGACGTGC ACAGAACCGA ATGGTGGTGG TGAATGTAAA ACCTTTACTT 1920
CCTTCCACCA AACACTGAAA AATAATAGTG TGTACACTGA GCCCTGTGAG GATTTGAGGA 1980
ACGATGAGCA CAGCCCATCC TATCAACAGA TCAACTGTAT CGACAGTGTC ATCAGATATC 2040
TGAAGAGCTA CAACATTCCA GCTTTGAAAA GAAAGTGTAT CTCCTGTACA AATACAACTT 2100
CTTCCTCCTC AGAAGAAGAC AAACAGAACC ACAAGGCAGA TGATGTCCAA GCCTTACAAG 2160
CGGGTTTGCA AATCCCAGCC ATACCTAAAT CAGAAATGCC AACAAATGGA CGGTCCATAG 2220
ACACAGGAGG AGGAGCTCCA CAGATCCTGT CCACGGCGAT GCTGAGCTTG GGGTCGGGCA 2280
TAAGCCAGTG CGGTTACAGC AGCACCATTG TCCATGTCCC ACCCCCAGAG ACAGCCAGGG 2340
ATGCCACCCT CTTCTATGAG CCCTGGACCG TGAACATGCA GCCAGCCCCT TTGACCTCGG 2400
AAGAATTTAA ACACGTGGGG CTCACAGCGG CTGTTCTGTC AGCGCACACC CAGAAGGAAG 2460
AGCAGAATTA TGTTGATAAA TTCCGAGAAA AGATCCTATC ATCACCCTAC AGCTCCTATC 2520
TTCAGCAAGA AAGCAGGAGC AAAGCTAAAT ATTCATATTT TCAAGGAGAT TCTACTTCCA 2580
AGCAGACGCG GTCGGCCGGC TGCAGGAAAG GGAAGCACAA GCGGAAGAAG CTGCCGGAGC 2640
CGCCGGACAG CAGCAGCTCG AACGCGGGCT CTGGTCCCCG CAGGGGAGCG CATCAGAACG 2700
CACAGCCCTG CTGCCCCTCC GCGGCCTCCT CTCCGCACAC CTCGAGCCCG ACCTTCCCAC 2760
CTGCCGCCAT GGTGCCCAGC CAGGCCCCTT ACCTCGTCCC AGCTTTTCCC CTCCCAGCCG 2820
CGACCTCTCC CGGAAGAGAA TACGCAGCCC CCGGAACTGC ACCGGAAGGC CCGCATGGGC 2880
CGCCCTTGCC CGAGGGCCTG CAGCCTTACC CAGCTTTCCC TTTTCCTTAC TTGGATACTT 2940
TTATGACCGT TTTCCTGCCT GACCCCCCGG TCTGTCCTCT GTTGTCGCCA TCGTTCTTTC 3000
CATGTCCATT CCTGGGGGCG ACAGCCTCTT CTGCGATATC ACCCTCAATG TCGTCAGCAA 3060
TGAGTCCAAC CCTGGACCCA CCCTCTTCAG TCACCAACCA AAGGAGAGAG GAGGAAAAGT 3120
GGGAGGCACA AAGCGAGGGG CACCCGTTCA TTACTTCGAG AAGCAGCTCA CCCTTGCAGT 3180
TGAACTTACT TGAGGAAGAG ATGCCCAGAC CCTCTGGATC TCCAGATCAG ATGAGAAGGA 3240
ACATGTGCCC ACAAGCTAAG TATTGTGTTA CAGGCAACAA TGGCAGTGAG AGCAGTCCTG 3300
CCACTACCGG TGCACTGTCC ACGGGGTCAC CTCCCAGGGA GAATCCATCC CATCCTACTG 3360
CCAGCACACT GTCCATGGGA TTGCCTCCCA GCAGGACTCC ATCCCATCCT GCTGCCAGTG 3420
TTCTGTCCAT GGGGTCACCT CCCAGCGAAT CTCCATCCAG AACTGGTTCA GCAGCATCAG 3480
GAAGCAGCGA CAGCAGTATA TACTTTACTA GTAGTGTTTA TTCTTCTAAA ATCTCCCAAA 3540
ATGGGCAGCA ATCTCAGGAC GTACAGAAAA AAGAAACATT TCCTAATGTC GCCGAAGAGC 3600
CCATCTGGAG AATGATACGG CAGACACCTG AGCGTATTCT CATGACATAC CAGGTACCTG 3660
AGAGGGTTAA AGAAGTTGTA CTAAAAGAAG ACCTGGAAAA GCTAGAAAGT ATGAGGCAGC 3720
AGCAGCCCCA GTTTTCTCAT GGGCAAAAGG AGGAGCTGGC TAAGGTGTAT AATTGGATTC 3780
AAAGCCAGAC TATCACTCAA GAAGTCGACA TTCAAGCCTG TGTCACTTGT GAAAATGAAG 3840
ATTCAGCTGA TGGTGCAGCC ACATCCTGTG GTCAGATTCT GGTAGAAGAC AGCAGTTGAG 3900
TGACTGTGAG GATGAACCTT CGTACCCTTT CCGAGACGTG TTACACATAC AGACCTTTTT 3960
AAGTCCTGGA CTTTTAAATG ACCATGAAGT TATCATTGAA TGTTAAGATT TTTTCTTCTT 4020
GATTTTTTAA TACACATAAT CTTTTTGAAG CAGACATTGT ATACAAAATC TTACTTCTCT 4080
TTGTTCCTGA TATATTAAAA TGGCCAGTTA GGCTCTTTTT ATAGTTGAAT TGTCTTCTAA 4140
AGAGATTGGA TGGCCTCTAA AGAGGTATGT GTATCTTTAT TTCAGATGTC ACCCAGAGTA 4200
AATTATAATT AGAAGTATAG CTAGAATGAG CCCCAAACCT TAGCCTCATT TATTTTGTTC 4260
TGTTACGTAA GTCATTTTCC CCTTAGAGTG CTTGAATAAA TCCCACCTAC AGGTTGTATC 4320
CTTTTCATAA TGGTTTCCAT GAATGTAGTA CGTTCATATA GGCTTCATTC AACCTGGCGT 4380
TCCCCTCCAT AATTAAGATA AAACATTCCG GTTTTCTCAC AACACATTAG CACATACTGT 4440
CCATTAGCAT ATCTGGGATA ATCAGGTTTT GGGGGTTGAG TTTTGGCCTT CATCTTTGTA 4500
GATCCCTTTT CTATTGATTT CCCACCTTCC GGTGAGATTC TTGAAAGTCT TATCTTAAAA 4560
ATCGATCCGC TTACCATGGT CCTATTCTTG TGAGAGTTTC AGTTAGCGTT TGCATGTGTA 4620
ATATTAAAAT GAAAGAGCTT CTTACTCACC CAGTGCTGTT GCTCTTTTGA ATATTTTTGT 4680
TTTTAAAATA ATGATTGTAA AAAGTTTTAC AAGTAATGTA AAAGCTAGTA TCATTCTTAC 4740
ATACTTCTGT GTTTAAATTT TCATTCTTAC CGAAACAGTT AACTCTTTCT TTCCAATCAA 4800
TTTATACAAA AGAGGTCGCT CCAGCCCTAC CACAGGTCTG ATTGGCACTG CCTTTTGTTT 4860
GCCCTTGAAC AGGGCAGTGT CGTGGGGACT GCAAAAGAGA AAACGTCCAG GCGAGCCCAG 4920
TTGTCCTCGC CCACGGGGCC CTGCAGGCTC CATCAGTCAC TGCTTTCTAT GGCGTTTGTA 4980
GTTGTGTCTT TTAAGAAGTG AGTGTGATTG TTTACTTGAT AAATCAGCTC ACTCTCTGGT 5040
GCTCTTTAGA GAAGTCCCTG ATTCCTTCTT AAACTTGGAA TGATACATGA AATTCACACC 5100
CCTGCAGATC AGAAAAAACA AATAGAAGAA AATGAAGGTT ACAGTAACCT TTTGTCTTTA 5160
TATAACTTGC AACAAACTAA CTTATTTTTT TTTTCCTTTT TTTGTTTTTT TTTTTTATGG 5220
TTTTTTAAGG AAAATACTTC TTTCTCCTTT GAAGTTTTAC AGCTTTTTGT AAATGCGTCT 5280
TGATAATGAT TAGGAAAATC GACCTTTTCA TCCATGATGA CTATCCTCAT AGCTCAGATT 5340
TCCTTTCAAA GTAGTGGTTT TCTGGATGGT AATTCCATCT TAAGGTGTCA GAACTATTTT 5400
CAAATGCTGC CTTTGACAGT TCTTGGAATT TTCTAACATT AAGCAGTTCC ATGCAAATAT 5460
TCCTGTTTTA TAAATAGCTC TCATAGTCTG CTCCATCTTG ATAGTTAAGT GATTTCTGAA 5520
GCGTTTGTGT GTGTGTTGAT CAGGTTGTGT GATATTTTTG CTTGATAAAT AATAAAATTT 5580
TAAACAATTA ACCAGCCAGT AGATTGTCTG TCAGTGACCT TCTGTAGTAA TAAAGTTTTT 5640
GCCAATGTAA ATAAAAACGG TATCTGTAGC TATCAGTATC ATTGCGCATT CATATATGCT 5700
AAGCCTTATG TTCTCTAATA GAAGCCTTTC TTTTCCATTG TGTCTGGATA TTTGTATTAT 5760
CCAAATGTGC TTATTTCTTT GCCTTAGCAC ACATTTTATG GAGTACTTGT TATACTAGGT 5820
TTGATTTGAA ACTGGTGCTT GTCACAGAAC TGTCAGAGCA TGAGGAGCGC TCCTCCTGTG 5880
GGTGGACGCG TTGACGCACT CACAGGTTGC ACCTGCTGCT GGCGGTGAGC AGGGGTCTCA 5940
GCAGCTTGAC CACCGCCCCC CGAGGGGGCT CTCCCCAGCT TAAACTTTGT TGTTTAAATT 6000
TGTTAACTTT TTATATTAAT GACTATTGAA AGTGGTAATA AAAATTTATA TTACAGGCTT 6060
CAATGTTTAC ATGAATGTTA CCCAAAACTG TGTTTTCTTT GGTCAGAGGT CAAGATTTAT 6120
GACAAAGAAG ATGCTGTATG AATGGAAATC ATTTTGCAAT TGAGTGAAAC TTCATTGTAA 6180
TTCACAGTGT AAATTTAATC CAAACTGAGA TTTTGTTTCA ACTGAATTTA TAATTAACTC 6240
TGAATTTGTT TTTAATCATT AGTAATATTT CAATTGGGTA TCTTTTTAAG TAAAAACAAC 6300
AAATAAACTC TGTACATGTA AAACGTG 6327
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-CaE-021686Caenorhabditis elegans29.27 1.50e-14 79.34
CGD-GaG-020965Gallus gallus42.61 0.00e+00 770
CGD-MuM-021078Mus musculus (Mouse)56.5 0.00e+00 1134.8
CGD-OvA-022195Ovis aries55.95 0.00e+00 1164.4
CGD-RaN-021797Rattus norvegicus57.12 0.00e+00 1157.9
Gene Ontology

GO:0006355--regulation of transcription, DNA-templated
GO:0045187--regulation of circadian sleep/wake cycle, sleep
GO:0007623--circadian rhythm
GO:0019900--kinase binding
GO:0031625--ubiquitin protein ligase binding
GO:0000122--negative regulation of transcription from RNA polymerase II promoter
GO:0005515--protein binding
GO:0032922--circadian regulation of gene expression