CGDB Gene Information

Tag Content
CGDB ID CGD-OrL-069692
Ensembl Accession ENSORLP00000019968.1
Protein Name per3
Ensembl Information ENSORLG00000015952; ENSORLT00000019969
Organism Oryzias latipes
NCBI Taxa ID 8090
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 15 ZT 9 LD 6 duodenum Predicted from orthologs E1C8E2
ZT 0 ZT 12 LD 5 pineal gland Predicted from orthologs E1C8E2
ZT 15 ZT 3 LD 2 blood Predicted from orthologs P56645
CT 16 CT 4 DD2 2.7 human HaCaT keratinocytes Predicted from orthologs P56645
ZT 4 ZT 21 LD 3.5 human HaCaT keratinocytes Predicted from orthologs P56645
ZT 8 ZT 0 LD 4.6 brown adipose tissue Predicted from orthologs O70361
ZT 8 ZT 0 LD 2.46 epididymal white adipose tissue Predicted from orthologs O70361
ZT 12 ZT 0 LD 10 femur vertebra Predicted from orthologs O70361
ZT 8 ZT 4 LD 5.2 heart Predicted from orthologs O70361
ZT 12 ZT 0 LD 35 jejunum Predicted from orthologs O70361
CT 9 CT 21 DD1 2 SCN Predicted from orthologs O70361
ZT 8 ZT 16 LD 2.5 SCN Predicted from orthologs O70361
CT 15 CT 3 DD1 2 testis Predicted from orthologs O70361
CT 15 CT 3 DD1 4 liver Predicted from orthologs O70361
ZT 8 ZT 0 LD 14 lumbar vertebra Predicted from orthologs O70361
CT 0 CT 12 DD2 8.8 NIH-3T3 cells Predicted from orthologs O70361
ZT 8 ZT 0 LD 23 liver Predicted from orthologs O70361
ZT 6 ZT 18 LD 4 muscle Predicted from orthologs W5PL09
ZT 12 ZT 0 LD 25 abdominal adipose tissue Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 2.3 basolateral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 12 ZT 0 LD 5 entral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 4.5 hippocampus Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 14 nucleus accumbens core Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 5 nucleus accumbens shell Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 8 prefrontal cortex Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 6 SCN Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 2 ventral tegmental area Predicted from orthologs Q8CJE2
Descriptionperiod circadian clock 3 [Source:ZFIN;Acc:ZDB-GENE-000804-1](View all)
Protein Sequence
(Fasta)		 HSEHADGDKG QAHREVMVTV AEMKKRLPVD KRSRIKVSTV EALHYALNCV KQVQANSEYY 60
KLLMRNGQDD QKDATLCTLE ELERVTSEHT LKNTDSFIVV FSLSSGHVLY ASEQAPSILC 120
CKRKFLESAK FVELLFHQDV NVFYSHTAQP HLPPWSNSHT AGVLFDCAQV KSFFCRIRGG 180
KDREGEMRYN PFRVTPYQLK VQGAANGGED EEPCCLALAE RIISGYEAPR IPMDKRIFTT 240
THSPGCVFLE VDERAVPLLG YLPQDLIGTS LLTSIHPEDR PLMLSMHRKV LKYAGQHPFE 300
HSPVRMRCQN GDYITLDTSW SSFINPWSRK VAFIIGRHKV RTSPVNEDVF AAQTKNEVPV 360
SHEEIKDLQA KIYKLFLQPV HNNGSSGYGS LGSNGSHEHY ISVASSSDSN GNLWEDSHQQ 420
PMTLLQICAD VNRVKSWGQH AYRDSCQKVA HRGKLATAAQ PPSASNPKGR NNGESRKPTH 480
IPSYQQINCV DNIFRYLEGC TTSVLKRKSD SHSLATSSSS SSTSEDDKPL GGTDKSQSSS 540
HAHFPVVVLD SEVSVGPATA AVVGAPLTDI TMSTKAMSDV SVTSQCSYSS TIVHVPQPES 600
EATALEDAPM GSEPADAAAT PVRPAPSPAA EERRFLGLTK EVLSAHTQKE EQDYVDRFRH 660
RILQSPYSAY LQGDNSSMAQ SHQPGECIFL PIKSADCRKP RHKRPKAQGS SGSPASHASP 720
PRRAPDSSWP SSESTQPQSA QSQAGIQPVQ MVPLQNLQNV QNFDNLQSAQ NFNPYMAPVM 780
AVILPNYPTI TPGFPPMYLP ANPTAIPQAS VGMAGFVPGG APLSFTTSFQ PQPCPNAQTS 840
PRSFICSPRA CSSAGEEEEA AGHPALFSSS RSSSPLQLNL LQEELPKQSE GQSSTGLNHS 900
ESLHENPNEE DARSGTGSNA SGSGSGESGG SLGSGSGSNG TSTSHTGTYR LTHLVCVCKT 960
KQKNPTKTSM KFSHLPPPSS SPASPQVLVF TAGMVRRPED LRVSEGSCST NSSKYFASND 1020
SSETSRKARK SQETPPEHQH SFDTPVENPL WSMIQNTPER VMMTYQIRSR DQSLVLAEDK 1080
EKLRVLQPLQ PWFSQEQKEE LADVHPWMQR HTIPQEIDMQ GCVDCSS 1127
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-GaG-020965Gallus gallus50.49 0.00e+00 651.4
CGD-HoS-021431Homo sapiens (Human)43.06 3.00e-174 610.9
CGD-MuM-021078Mus musculus (Mouse)45.15 7.00e-163 572.8
CGD-OvA-022195Ovis aries47.2 6.00e-166 582
CGD-RaN-021797Rattus norvegicus45.39 4.00e-165 579.7
Gene Ontology

GO:0009648--photoperiodism
GO:0007165--signal transduction
GO:0004871--signal transducer activity
GO:0005515--protein binding
GO:0032922--circadian regulation of gene expression