CGDB Gene Information
| Tag | Content | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| CGDB ID | CGD-FiA-032827 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Ensembl Accession | ENSFALP00000010302.1 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Name | PER3 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Ensembl Information | ENSFALG00000009854; ENSFALT00000010342 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Organism | Ficedula albicollis | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| NCBI Taxa ID | 59894 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Circadian Information |
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| Description | period circadian clock 3 [Source:HGNC Symbol;Acc:HGNC:8847](View all) | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Sequence (Fasta) |
MMMIQEMKRC LPEEKRSSNK PSTISALNYA LQCVQQVQAN NDFFQAFNDR RAFQADVVTY 60 SIEELVAVAS EHTPKNTDTF VAVFSLLSGR IVHISEQAAS ILNCKKKVLD SSRFVELLVP 120 QDVSVFYTHT DQSHLPLWNM ESQTASPYEY AQVKSFFCRI RGGKDQEQEA RCYPFRITPY 180 LVHVCTSVRV DAESCCLALA EKIHSGYEAP RIPMDKRIFT TTHTPGCVFL DIDDRAVPLL 240 GYLPQDLIGT SILMYLHPED RPLMITIHRK ILKFAGQPPF EHLPIRFCTQ NGDYVILDTS 300 WSSFVNPWSR KIVFIIGRHK VRTSPLNEDV FAPRSKEMSS VEKEIRELQG QIYKLLLQPV 360 HSNVSSGYGS LGSSGSYEHY ISIASSSDSN GNCAEETQEP MTLQQVCADV NRIKNLGQQM 420 YIASRSKNAN EQAVSSDILG GKRHTASCFL QTLRGDSTDD PGNTFYDGPK KTPHVPSYQQ 480 INCVDSIIRY LESCSIPALK RKCKSSANTS SSSSEDDKQV QQSQQQVRAL EAVESHTPIS 540 AGLEETLKDQ TTAGMVGAPL ADLTLSNKAP SVISVTSQCS YSSTIVHVPH PESEVTTMED 600 AAVGSEQIEL PPVNAQSLAV LPEDLKPVGL TKETLSAHTQ KEEQNYVDKF RQRVLLSPFR 660 TYLQQGSRSN NRHSCGQGDS PAKQMSPASC KKGKHGKFKR QKPQRQCSDS HSSSKNRNSL 720 PCEKKTNQKQ LFSPSEVSYL SSSSLNVHPP VGFPAYSNPV STFPASSGGE QLALRSLQPQ 780 SMSSSQLYCG TQSYPVFYPP NIGTFMAVFF QGFPMYAQMP QHVFLPSPQC VYPPSSYPCT 840 TLPPAPPPCA PSPAAPHSVD QPFPASPHSS VEDQQEGQCD QALLLSSSRS SSPLQLNLLQ 900 EELPKPMELS VSADVKPQAE DKCDNDPEDN GNNAALEFPD RSLYEDSQLG SGSAASGSGS 960 ALSGSLSSSF NETSGHGTAS KEEKNQEAEE KGTAYKSKHE SACVMMDYTP ERVLMNYQMP 1020 NRVKEEVLKQ DLEKLAVMQK QQPWFTDGQK KELAEVHSWI RTQTVPLQIS TQGCVTCDSR 1080 EASCEAAVAD DSMENKGEPP PVLPR 1105 |
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| Nucleotide Sequence (Fasta) |
ATGATGATGA TCCAAGAAAT GAAAAGGTGT TTGCCCGAAG AGAAAAGGAG TTCTAACAAA 60 CCCAGTACCA TCAGTGCTCT CAACTATGCC TTGCAGTGTG TCCAGCAGGT CCAAGCAAAC 120 AATGACTTTT TCCAGGCTTT TAATGACCGA AGAGCGTTTC AGGCAGATGT GGTGACATAC 180 AGCATAGAAG AGTTGGTGGC AGTTGCATCT GAACACACTC CAAAAAACAC TGACACATTT 240 GTGGCTGTAT TTTCTTTGCT GTCTGGACGC ATAGTACATA TTTCTGAGCA GGCAGCATCC 300 ATTCTGAACT GTAAGAAGAA AGTGTTGGAC TCTTCCCGGT TTGTGGAGTT GCTTGTCCCT 360 CAGGATGTGA GTGTGTTCTA CACACACACT GATCAGTCTC ACCTGCCCCT TTGGAACATG 420 GAAAGTCAAA CAGCTTCTCC GTATGAATAT GCCCAGGTGA AATCCTTTTT CTGCAGGATC 480 AGGGGTGGGA AAGATCAAGA ACAAGAAGCA CGTTGTTATC CCTTCCGAAT CACCCCATAC 540 TTGGTCCATG TGTGCACTTC TGTCCGTGTG GATGCAGAGT CCTGCTGCTT AGCTTTGGCT 600 GAGAAAATCC ACTCTGGATA TGAAGCTCCT CGAATTCCTA TGGATAAAAG AATATTCACC 660 ACCACACATA CCCCTGGATG TGTTTTTCTG GACATAGATG ACAGAGCAGT GCCTTTGTTG 720 GGTTACTTAC CTCAGGATTT AATTGGAACA TCCATTCTGA TGTATTTGCA CCCAGAAGAT 780 CGTCCTTTGA TGATCACTAT TCACCGGAAA ATACTGAAAT TTGCTGGTCA GCCCCCTTTT 840 GAGCATTTAC CTATTAGATT TTGTACTCAA AATGGGGATT ATGTCATACT GGACACCAGC 900 TGGTCCAGTT TTGTGAATCC TTGGAGCAGG AAAATTGTGT TCATCATTGG CCGACACAAA 960 GTCCGGACAA GCCCTCTGAA TGAAGATGTC TTTGCCCCAA GAAGTAAAGA AATGAGCAGC 1020 GTGGAGAAAG AGATAAGAGA ATTACAAGGA CAAATTTACA AACTGCTTCT GCAGCCAGTT 1080 CACAGCAATG TTTCCAGTGG TTATGGAAGC CTTGGAAGCA GTGGCTCTTA CGAGCACTAC 1140 ATCAGCATAG CATCTTCAAG TGACTCTAAT GGGAACTGTG CAGAGGAAAC ACAGGAACCA 1200 ATGACGTTGC AACAAGTTTG TGCAGATGTC AACCGAATAA AGAACTTGGG GCAGCAGATG 1260 TACATTGCAT CTAGGAGCAA GAATGCAAAT GAACAGGCTG TGAGCTCAGA CATTTTGGGA 1320 GGGAAGAGGC ACACTGCTTC CTGTTTTCTT CAGACACTGA GAGGGGATAG CACAGATGAC 1380 CCAGGCAACA CTTTTTATGA TGGTCCAAAG AAGACTCCAC ATGTTCCTTC CTATCAGCAG 1440 ATCAATTGTG TTGATAGTAT CATCAGATAT CTAGAGAGCT GCAGTATTCC AGCACTGAAA 1500 AGGAAATGTA AATCTTCTGC AAATACATCA TCGTCATCTT CAGAAGATGA CAAACAAGTC 1560 CAGCAAAGTC AGCAGCAAGT CAGGGCGCTG GAAGCAGTTG AGTCCCACAC GCCAATATCT 1620 GCTGGTCTGG AAGAGACGCT GAAAGACCAG ACAACTGCAG GCATGGTGGG AGCTCCTCTG 1680 GCAGACCTGA CCCTGTCCAA CAAGGCTCCA AGTGTCATAT CTGTCACCAG CCAGTGCAGC 1740 TACAGCAGCA CTATAGTGCA TGTCCCACAC CCTGAATCAG AAGTGACTAC AATGGAGGAT 1800 GCTGCTGTTG GAAGTGAACA GATCGAGCTG CCTCCTGTGA ATGCTCAGAG TCTTGCAGTG 1860 CTGCCTGAGG ACTTAAAGCC AGTTGGGCTA ACAAAAGAGA CATTGTCAGC CCACACTCAA 1920 AAGGAGGAGC AGAACTATGT TGACAAGTTC CGACAGAGGG TCTTGCTCTC TCCATTTAGG 1980 ACTTACCTTC AACAAGGAAG CAGAAGTAAC AACAGACATT CCTGTGGCCA AGGTGATTCC 2040 CCTGCAAAGC AGATGAGCCC AGCTAGCTGT AAAAAAGGAA AACATGGAAA ATTCAAGCGC 2100 CAGAAACCTC AGAGACAGTG CTCAGATAGC CACTCTTCTA GTAAAAACAG AAATAGTCTT 2160 CCATGTGAGA AGAAAACAAA TCAGAAACAG TTGTTCTCTC CCTCAGAAGT GTCTTATCTG 2220 AGCTCCTCCA GTCTGAATGT TCATCCTCCT GTGGGATTTC CTGCCTATTC AAATCCGGTG 2280 TCTACTTTTC CAGCCTCTTC TGGAGGAGAG CAGCTTGCCC TTCGCTCATT ACAGCCTCAG 2340 TCCATGTCCT CATCACAGCT ATACTGTGGA ACACAGTCAT ACCCAGTCTT TTATCCCCCA 2400 AACATAGGCA CATTCATGGC TGTATTTTTT CAGGGTTTCC CCATGTATGC TCAGATGCCT 2460 CAACATGTCT TTCTCCCTAG CCCTCAGTGT GTTTATCCCC CCTCTTCATA TCCATGCACC 2520 ACACTACCTC CAGCACCCCC TCCTTGTGCT CCATCACCAG CAGCGCCACA CTCAGTGGAT 2580 CAGCCCTTTC CAGCCTCTCC TCACTCATCT GTGGAGGACC AGCAAGAGGG CCAGTGTGAC 2640 CAGGCCCTAC TGCTGAGCAG CTCACGGAGC AGCTCCCCAC TTCAGCTGAA TTTGCTTCAA 2700 GAAGAGCTGC CAAAACCTAT GGAGCTTTCC GTTAGTGCTG ATGTTAAGCC ACAGGCAGAG 2760 GATAAATGTG ATAATGATCC AGAAGATAAT GGTAACAATG CCGCTCTTGA ATTTCCTGAC 2820 CGCTCGTTGT ACGAGGACTC ACAGTTGGGT TCAGGTTCAG CAGCATCAGG CAGTGGATCA 2880 GCTTTATCTG GTTCTTTAAG TTCTAGCTTC AACGAGACTT CTGGTCATGG CACAGCTTCC 2940 AAAGAAGAGA AGAATCAGGA AGCAGAAGAA AAAGGGACAG CTTATAAATC GAAACATGAG 3000 TCAGCCTGTG TGATGATGGA TTACACACCT GAGAGAGTTC TAATGAATTA CCAAATGCCA 3060 AACAGAGTCA AAGAGGAAGT TCTAAAGCAG GATCTGGAGA AGCTGGCAGT CATGCAAAAG 3120 CAGCAGCCTT GGTTTACAGA TGGGCAGAAG AAGGAGCTTG CCGAGGTGCA CTCATGGATC 3180 CGGACCCAGA CTGTCCCCCT GCAAATCAGC ACCCAGGGCT GTGTTACGTG TGACAGCAGG 3240 GAAGCAAGCT GTGAGGCTGC AGTGGCTGAT GACAGCATGG AAAACAAGGG AGAGCCTCCT 3300 CCAGTCCTGC CACGCTGAGG ACATCAGCAC CTGTGTCAGT GCAACTGCTT GATGTGATTC 3360 CCACCCTCTT TCCCTCTGGC TTTGCTCCAT ACCAGCAGTG AATCTCCATG GCCATCTCTT 3420 ACCAATATGA AATATTGCAG CCACACGTGA AACTCAATCT TCCTCTGTTA CCCCTCTGCT 3480 CCTGGCATGA CTCCGAAGAC AATCTTTCAG TGGGAGGCTG TTTCACTTTC TGACCTCACA 3540 GACTTGACAC AGGATGGGTT ATGTTTGTAA CCTTTAACTG CTCAATGATG AGCAAAATAC 3600 AAAGATTTTT TTTTTTGTTT GGGTGTTTGT TATTTGAAGT TGGCAAATAA GTGTGAAGAG 3660 ATGCAGTGTT TAAGAACCTG TGGTGATGAA CCTACTGATC AGAGCATGTT TACTCTCCAA 3720 GTAAGGTGGA TGTATTGAGG CCAAGCTACA GTACTCTTCA TTTTTGTTCA CTATTTAAAG 3780 TGAGCTAAAG ATCCAAATAT TCTGAGGCTC TTAAACTGTG GTAGCTGGTT TGAGAATCCA 3840 ATAGGCTTTT TAAAGAGCAG CTGAAACCAG CCAGGTTATT CTGCATCAAA TGCCTTTTGC 3900 TACCTTGTGC CCATTGAAAA GGAGTAAGCT GACATGAAAA GAAGCAAATT TTTCCCTATG 3960 TTTTTTGTGA TGTGTGTTTT GGAGTCAAGT TGTTTTACAG CTTTTAATTT TAAAGCTCTA 4020 TTTATCAAGA CAGATATATA AATTAATTGA GGATAACTGG TTTGCAAATA CACCAGGGAT 4080 GAAATTACAT ACAGCAATTA AAAAAACCCA GCCAACCCAG AAGTATGAAT CCACAGGCTC 4140 TGCTTTTTAA AAACAGACCC ATGGGAAATT TTCTCTATCA AGGCAAGTAG TTATTAATTA 4200 AAGTAGTTAC ATGCAATCTT ATCTTACTTT GGTAGTGCAT GGGAAGGTGG GTTTGTATCT 4260 TTATTTTCAT TGTTGAGTGT TTAGAAGAGT TGAATCCAGA CATAACAAAT AGGAAATTAT 4320 CTGAGCAGTT TCTCTGATTT GCTTTTGTTG TGGTGATGCC AAAACAAAAA AGAATTAATT 4380 TCATTTCTTC TGCTTTCAAA ACTCACATGT TGTGGAACTA AACTTGAACA TCAGACTACA 4440 TATTCATTAT TTCCGAGCAC TTTCTGCATA AGATTTAACC TCTTTGATTG TAATGGAATC 4500 TCTGGCTGTT GAAATCCCTG GATGAAAAAG GAGTTTGTAG TTCAGAATGT GATAACCACT 4560 TTCAGTATGT AAAAGGATTT GTTCTCATTA ATTTCTCAAA GTGCTCTTCA AACAGGACAT 4620 GTTTGGCTAA AAACCTGGCA AATTTTGTCT GATTTCCCCT CTGTTTATCA AAGGCTGGAT 4680 GTGATCAGAT TTTCCTTGTG GTGTTATTAA TCACCTTAGC TTTCTTGGCA AAGAGTTTTA 4740 GAATGTAACA CATTATTTGC CCTTTTGTTC TGTGTAATCC TTTTGCTGGT GTGTGAAATA 4800 TTTTCATTTC TCTAGTTTCA CTTACTGGTA AGCTTCAAGT AAAATACTGC GATCTGCAGG 4860 TCATTGAAGG GAGATTATAT TTATCTAAAG GTTTCTTTAC TTGTAAAAGT CAATCCAGTG 4920 ACAATCTGTA TTGTTAAAGT TTATTTTAAG CAAAGTTACT TTTACAGAAT TTTGACTTTT 4980 CAAGGCTAAT TTGACTCAGG CAGAGTTCTT TTTATGGGTT TGGGGTTTTT TCATTGTTTT 5040 TGCCTGCTCT GTTTATACCT GTTGGATTCT ATTTATTCTT AAGCTACACT TTTTTGTCTT 5100 TCAGTTTTTT CAGCTTGAAC TTGTTTTTTT CTTGCGTTGT AAATCAGCAG AGGTCCACAC 5160 ATCCTCAAAC CTCAAACAGC TCTTAAAATA AGAGACTTCA GTAGGTGTTT ACATGTAGCA 5220 GGTTATGTAT TCAAGAAGGA AGATGTGGGC ATGATCTTAC ACCTTTCCTA GTCTTTTTAG 5280 AGCATTGTCC AAACATGGTA TTCTGCTTTA TAACCACAAT GCCTAAAATA TTTGCTCTAA 5340 AACATGTAAT CAGATACTTT GTATAAAGGT TCTTTCTTGA TTGGGAAGCT TCTTATCTGT 5400 CCAATTAGAC TTATGCACTA GAATCCATTC TGCTTACCTG TGTTTAAATT AAAATGATTG 5460 CTTCAATGCA TTTTGAAACT TAGTGAAATA GATTAAATTG AATATTTCAG GTAAGGACAG 5520 CTGTCTCCTT CAAAATAGTT TGGAAGCCTA AGCCAGAAGG AAAGTTATGA TAACAGTAGA 5580 CTCTTTTGTG TATGTTCTTT TCATTTCCTG AGTTTGAAAG TGTTCATTTA TTTCCCAAGT 5640 GTGAAGATGA GCTGATTTGC AATGTCTTAG CAGGGAGACA TGTCATCTCT TGTAAAGCAG 5700 TGAGACTTAG TTCAGGAGAA TGGCAATATA TACCTAACAC TCAAATAATG CTTTCAATCC 5760 ATAGGTCTGT GAACATGTCC AAAAGATGTC TTTTTTTATC CCAGCTGTAG AAAAAGAGGC 5820 AGAGACACAG AAGTGTCTCT GCATACCTGC AGTTCATTCT AAATTCAGGA GTAGAATTTG 5880 GGAGTCTTCA CTTGCTGTAT TCTGTGCTGT CTTTGCTACA AGTGATCAAG ATTCTGTGTG 5940 TAGAAACCTG GTCATGTTAC CTTTGTTTCT TGTTTGGAGA TGTTAACCTT TCTTGTACCC 6000 CTGCTGCTGT GAATTTGTGC CCAGTAGAAT AATTGAGCAA TGGAAAGCCC AGGCAGTTTT 6060 CTAATTGCTG TGAATACCAT AGGCTCTCTG GCCATATATA ATGAAAATAC ATGTGCCTAG 6120 GAGTTTGAAT TCCAAGTTTG TAATCCTGGC TAAATCTTAG GTGCAGGATC CCTTCTGGGG 6180 CTACACACAT CCTGAGTTAG GAAAAAATTG TGATGTGGGA GAATAGTGTA AGAGGAATGA 6240 ACAGATAAAG CAGTGCCCTG TGTGATGATG AGACAATTAT TTGCCCAAAA ATCAAATTAT 6300 CTTGGCTGCA AAATCAGCAG GTTTTATCCC CTTAGGATAA AAAACCCCCC AAACTTTCCC 6360 GAGGTATCCT GCTAGAACCA CAACTTCATG AAATGCCTTA TCAAGCCTTT GACCTCATTT 6420 CCTTAAGTTT TCAGGAGCTG GCAGTTTTTT CTTCAGCTTG TACTAATCTT TCAGTCCTTG 6480 TAGTGTGCTG AAGTGATCAC AGCAAGATGC AGTTCTGATC AGAAAGGCCA ATGGAGTGAG 6540 TGTTGCAGAT GGATTTGCAC CTGCTGCTGT TTTGTTTCTG TGGCTTTGTT TTGCCTGGAA 6600 AAATGTTGCA GACGGTTTAG AGCTGCTTGG AATATCACTT ATTTAGTGGT CAGAGGGAAA 6660 ACATGCTGGT ACAGCACTGA TGCAGTTACT GCCCCCTGTG GGGGTGTCAG CAGTTTGGAA 6720 ACCCTTGGAG GATTTCGCTG GCAATTTTTT TTTGTTGTTG TATTCATAAA TGTAGAATTA 6780 TGTTTTTAAA AGATGAGTTG TTGTGCAGAT ATTTTCATGG CATTGCTGTG AACAGAAGGG 6840 ACCCTTATGT ATTTTTACAG TGTGGTAAAT ACTTGCTGAA TGAGTAATGT ATTGGTAAGT 6900 TTATCTTCCA GCTGAATCGA GTTTTGAATC ACAATTGAAT GAATTTTTAC ATCAGTTGCT 6960 AGGAGTATTT TATTGAAACA ATATTCAGCT GTGGTTGAAT TTACAGTTGT GATTTTAACT 7020 GTACACTTTA AAGGAGCATC TGATTTTATA AATAAAACTA AAAAAATATG CTGC 7074 |
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| Sequence Source | Ensembl | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Orthology |
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| Gene Ontology | GO:0032922--circadian regulation of gene expression |
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