CGDB Gene Information

Tag Content
CGDB ID CGD-TeN-064311
Ensembl Accession ENSTNIP00000010077.1
Protein Name per3
Ensembl Information ENSTNIG00000007273; ENSTNIT00000010257
Organism Tetraodon nigroviridis
NCBI Taxa ID 99883
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 15 ZT 9 LD 6 duodenum Predicted from orthologs E1C8E2
ZT 0 ZT 12 LD 5 pineal gland Predicted from orthologs E1C8E2
ZT 8 ZT 0 LD 4.6 brown adipose tissue Predicted from orthologs O70361
ZT 8 ZT 0 LD 2.46 epididymal white adipose tissue Predicted from orthologs O70361
ZT 12 ZT 0 LD 10 femur vertebra Predicted from orthologs O70361
ZT 8 ZT 4 LD 5.2 heart Predicted from orthologs O70361
ZT 12 ZT 0 LD 35 jejunum Predicted from orthologs O70361
CT 9 CT 21 DD1 2 SCN Predicted from orthologs O70361
ZT 8 ZT 16 LD 2.5 SCN Predicted from orthologs O70361
CT 15 CT 3 DD1 2 testis Predicted from orthologs O70361
CT 15 CT 3 DD1 4 liver Predicted from orthologs O70361
ZT 8 ZT 0 LD 14 lumbar vertebra Predicted from orthologs O70361
CT 0 CT 12 DD2 8.8 NIH-3T3 cells Predicted from orthologs O70361
ZT 8 ZT 0 LD 23 liver Predicted from orthologs O70361
ZT 6 ZT 18 LD 4 muscle Predicted from orthologs W5PL09
ZT 12 ZT 0 LD 25 abdominal adipose tissue Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 2.3 basolateral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 12 ZT 0 LD 5 entral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 4.5 hippocampus Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 14 nucleus accumbens core Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 5 nucleus accumbens shell Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 8 prefrontal cortex Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 6 SCN Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 2 ventral tegmental area Predicted from orthologs Q8CJE2
Descriptionperiod circadian clock 3 [Source:ZFIN;Acc:ZDB-GENE-000804-1](View all)
Protein Sequence
(Fasta)		 SGSHDLSSSA DHSPSSALGS TSSSAKSENT DGSRRQAHKE VMNTVAEMKK RLPSDKRSRS 60
KASTVEALHY ALNCVKQVQA NSEYYNLLMQ NGQDERRDAS VFTLEELERV TSEHTLKNTD 120
SFVVVFSLSS GRVMFASEQA PSVLCCKRKF LESAKFVELL FHQDVNVFYS HTAQLHLPPW 180
SNSHTAAGVL FDSAQVKSFF CRIRGGKDRD GEMRYNPFRI TPYLLKVQGK GSSGGEEEPC 240
CLALAERIIS GYEAPRIPLD KRIFTTTHSP GCVFLEVDDR AVPLLGYLPQ DLIGSSLLTF 300
IHPDDRPLML SMHRKILKYA GQSPFEHSPV RLRCQNGDHI TLDTSWSSFI NPWSRKVAFI 360
IGRHKVRTSP LNEDVFAAPS KDSITVSHEE IKDLQAKIYK LFLQPVHNNG SSGYGSLGSN 420
GSHEHYISVA SSSDSNGNLW EDSHREPMTL QQICADVNRV KSWGQQVYLG SSHKISFLGK 480
PDRVSQACVP PANSNPEVRD HEDSRKQAPV PSYQQINCVD NIIRYLESCT GSALKRKSES 540
HSLVTSSSSS STSEDDKPAG ATDAAQASSD VVLDSGVSVA PTAAAVVGAP LTDITLSTKA 600
MSVVSVTSQC SYSSTIVHVP QPESEATALE DAPMGSEPAE ITQTAARPAP SPPTEERRFV 660
GLTKEVLSAH TQKEEQEYVD RFRHRILQSP YSSYLQLDNS SMAHSHQPGE WNRSRRGKLR 720
YKRPKPQGSS DSYASPPGPK SSWPSSESSH PQIGVPYGQT SPLQAPYYHP MMATRPGTEQ 780
PLSLQPMAPA QTLHPYMTPV MAVILPNYPA LTPGFPPVYP PPAASLLPQA PINMAAVVPG 840
PAHFAPPLFQ AQAAPPPQTT LGPLLCSPRA SSSVGDEEEE AGPRALFSSS RSSSPLQLNL 900
LQEELPKPSE GQGSTGHNRP ESLHDQCVNE GDNPSDSGNQ DAQSTSSELL DLLLQEDARS 960
GTGSNASGSG SLGSGSGSGS NGTSTSHTGS SNSSKYFASN DSSDTSRKAR KSQEALPEHQ 1020
HDFETRVENS LWSIIQRTPD RVMMTYQMHA RDQNEVLAED REKLRVLQPL QPWFTQEQRE 1080
ELAEVHSWIQ QNTIPEEINT QGCEGCRIAG APRPPLPPAP ESSSSQELPE QDALGPDVET 1140
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-GaG-020965Gallus gallus51.89 0.00e+00 673.7
CGD-MuM-021078Mus musculus (Mouse)42.53 4.00e-163 573.5
CGD-OvA-022195Ovis aries46.29 2.00e-163 573.5
CGD-RaN-021797Rattus norvegicus42.82 2.00e-165 580.5
Gene Ontology

GO:0032922--circadian regulation of gene expression
GO:0005515--protein binding
GO:0009648--photoperiodism