CGDB Gene Information

Tag Content
CGDB ID CGD-TaS-050246
Ensembl Accession ENSTSYP00000007096.1
Protein Name PER3
Ensembl Information ENSTSYG00000007736; ENSTSYT00000007742
Organism Tarsius syrichta
NCBI Taxa ID 9478
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 12 ZT 0 LD >10 Predicted from orthologs Q65ZG8
ZT 15 ZT 9 LD 6 duodenum Predicted from orthologs E1C8E2
ZT 0 ZT 12 LD 5 pineal gland Predicted from orthologs E1C8E2
ZT 8 ZT 0 LD 4.6 brown adipose tissue Predicted from orthologs O70361
ZT 8 ZT 0 LD 2.46 epididymal white adipose tissue Predicted from orthologs O70361
ZT 12 ZT 0 LD 10 femur vertebra Predicted from orthologs O70361
ZT 8 ZT 4 LD 5.2 heart Predicted from orthologs O70361
ZT 12 ZT 0 LD 35 jejunum Predicted from orthologs O70361
CT 9 CT 21 DD1 2 SCN Predicted from orthologs O70361
ZT 8 ZT 16 LD 2.5 SCN Predicted from orthologs O70361
CT 15 CT 3 DD1 2 testis Predicted from orthologs O70361
CT 15 CT 3 DD1 4 liver Predicted from orthologs O70361
ZT 8 ZT 0 LD 14 lumbar vertebra Predicted from orthologs O70361
CT 0 CT 12 DD2 8.8 NIH-3T3 cells Predicted from orthologs O70361
ZT 8 ZT 0 LD 23 liver Predicted from orthologs O70361
ZT 6 ZT 18 LD 4 muscle Predicted from orthologs W5PL09
ZT 12 ZT 0 LD 25 abdominal adipose tissue Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 2.3 basolateral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 12 ZT 0 LD 5 entral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 4.5 hippocampus Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 14 nucleus accumbens core Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 5 nucleus accumbens shell Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 8 prefrontal cortex Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 6 SCN Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 2 ventral tegmental area Predicted from orthologs Q8CJE2
Descriptionperiod circadian clock 3 [Source:HGNC Symbol;Acc:HGNC:8847](View all)
Protein Sequence
(Fasta)		 RRAPPGPRGQ AAGGAALCGE AETRSPGFRL QRGHVERSHS PRQDRNRVSE ELIMVVQEMK 60
KCFPSERHRK PSTLDALNYA LRCVHSVQAN SEFFSVLHQE GASVREETLC NLEELAALAS 120
EHTSKNTDTF VAVFSFLSGR LVHISAQAAS ILNCKKDFLE TFHFVDLLGP QDVRVFYAHT 180
ARAQLPSWNN WTQRAASQYE YAPVKSFFCR IRGGEDRERE KYYSPFRIIP YLIHVHSSAQ 240
PESEPCCLTL VEKIHSGYEA PQIPVDRILT KHTPGCVXXX XXXXAVPLLG YLPQDLIGTS 300
ILTHLHPKDR SLMVAIHQKV LKYAGHSPFE HLPVRFCTQN GDYVILDSSW SSFVNPWSRK 360
ISFIIGRHKV RTSPLNEDVF ATRIKKTNDN DKDITELQEQ IHKLLLQPVH VSASSGYGSL 420
GSSGSQEQHI SATSSSESSG HCVEDTHKEP MTLQQVYASV NKIKNLGQQL YIESVTKPSV 480
KPVMGTHTEP LGGGELADEQ EAFSSFQALK NKSMNIESCG DLKKDQHSPS YQQINCIDSV 540
IRYLKSYNIP ALKRKCVSYT NTASSSSEED RQHHKADDAQ ALQXXXXXXX XXXXXXXXXX 600
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXEDATLACE PWTLSTQPAP 660
LALAEFKHVR LTKAVLSAHT QQEEQHYVDK FREKILSSPY STYLQQESRS KAKYSQVEXX 720
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 780
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 840
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 900
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XQCVTGHRGN 960
KKSCPTASEL SMVLLHKESP SGTGSAASGS SDSSIYLANS DYSSEICQNG QQSRHVQNKE 1020
TFPNLAEESI WRMIQQTPEC ILMTYQVPER IKEVVLKEDL RKLESMRHQQ PQFSHGQMEE 1080
LANVYTWIQR QTIPQEIDTQ GCITCKSKDS VDPATEFCGH DPAEDGS 1127
Nucleotide Sequence
(Fasta)		 CGCAGGGCCC CTCCCGGCCC CCGGGGCCAG GCCGCCGGCG GAGCGGCGCT TTGCGGAGAG 60
GCGGAGACGC GGAGCCCCGG GTTCCGCCTG CAGCGGGGAC ACGTGGAGCG CAGCCACAGC 120
CCACGGCAAG ATCGAAACAG AGTTTCTGAA GAACTGATTA TGGTCGTCCA AGAAATGAAA 180
AAGTGCTTCC CGTCCGAGAG ACACCGTAAA CCAAGCACGC TGGATGCCCT CAACTACGCC 240
CTTCGCTGTG TACACAGCGT GCAAGCCAAC AGTGAGTTTT TCTCAGTTCT CCACCAAGAG 300
GGAGCCTCTG TGCGGGAGGA GACCCTGTGC AACCTTGAGG AGCTGGCTGC CCTTGCCTCA 360
GAGCACACAT CCAAAAACAC AGATACCTTT GTGGCAGTGT TTTCCTTTCT GTCTGGAAGG 420
TTAGTGCACA TTTCTGCACA GGCTGCTTCG ATCCTGAATT GTAAGAAAGA TTTCTTGGAG 480
ACCTTTCACT TTGTTGACCT GCTTGGCCCT CAAGACGTGA GGGTGTTCTA TGCACACACT 540
GCCCGAGCTC AGCTTCCCTC CTGGAACAAT TGGACCCAAA GAGCAGCATC TCAGTATGAA 600
TATGCTCCAG TGAAATCCTT TTTCTGCAGA ATCCGTGGAG GTGAAGATAG AGAGCGAGAG 660
AAGTATTATT CCCCGTTCCG GATTATCCCG TACTTGATTC ATGTGCATAG CTCTGCCCAG 720
CCAGAATCGG AACCTTGCTG CCTCACGCTG GTTGAAAAGA TTCACTCTGG TTATGAAGCT 780
CCTCAAATTC CAGTGGATAG AATTTTGACC AAACATACCC CAGGCTGTGT TTNNNNNNNN 840
NNNNNNNNNN NGGCAGTGCC TTTGCTAGGT TACCTACCTC AGGACCTGAT TGGAACATCG 900
ATCTTAACAC ACTTGCACCC AAAAGATCGT TCTCTGATGG TTGCCATACA CCAAAAAGTC 960
TTGAAATATG CAGGCCATTC TCCCTTTGAA CATTTGCCTG TGAGATTTTG TACGCAAAAT 1020
GGAGACTACG TCATATTGGA TTCCAGTTGG TCCAGCTTCG TGAACCCCTG GAGCCGGAAG 1080
ATTTCTTTCA TCATTGGTCG GCACAAAGTT CGAACAAGTC CACTAAATGA GGATGTTTTT 1140
GCTACCAGAA TAAAAAAGAC AAACGATAAT GACAAAGACA TAACAGAATT ACAAGAGCAA 1200
ATCCACAAAC TTCTCTTGCA GCCAGTTCAC GTGAGCGCTT CCAGTGGCTA TGGGAGCCTG 1260
GGAAGCAGTG GCTCGCAGGA GCAGCACATT AGTGCCACAT CCTCCAGTGA GTCCAGTGGG 1320
CACTGCGTGG AGGACACACA CAAGGAGCCG ATGACCTTGC AGCAGGTCTA TGCCAGTGTA 1380
AACAAAATTA AGAATCTGGG TCAGCAACTC TACATTGAAT CAGTGACCAA ACCATCAGTC 1440
AAGCCAGTGA TGGGGACACA TACAGAGCCG CTTGGTGGTG GTGAGTTAGC AGATGAGCAA 1500
GAAGCCTTTT CTTCCTTCCA AGCATTGAAA AATAAGAGCA TGAACATTGA GTCTTGTGGC 1560
GATTTGAAGA AAGATCAGCA TAGCCCATCC TATCAGCAGA TAAACTGTAT TGACAGTGTT 1620
ATTAGATACC TGAAGAGCTA CAACATTCCA GCTTTGAAAA GAAAGTGTGT GTCCTATACA 1680
AATACAGCTT CTTCATCCTC AGAAGAAGAC AGACAGCACC ACAAGGCAGA TGATGCCCAA 1740
GCATTGCAAG NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1800
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1860
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1920
NNNNCAGAGG ATGCCACCCT AGCATGTGAG CCCTGGACCC TAAGCACACA ACCAGCTCCT 1980
TTGGCCTTGG CAGAGTTTAA ACATGTACGG CTCACAAAGG CTGTTCTGTC AGCCCACACC 2040
CAGCAGGAGG AACAGCATTA CGTTGATAAA TTCCGAGAAA AGATTTTGTC ATCACCCTAC 2100
AGCACCTATC TTCAGCAAGA AAGCAGAAGC AAAGCTAAAT ATTCACAAGT TGAAGNNNNN 2160
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2220
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2280
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2340
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2400
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2460
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2520
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2580
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2640
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2700
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2760
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2820
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNCAATGTG TTACAGGCCA CAGAGGAAAT 2880
AAGAAAAGTT GTCCTACTGC CAGTGAACTG TCCATGGTGT TACTTCACAA AGAGTCTCCA 2940
TCTGGAACTG GTTCTGCAGC ATCAGGAAGC AGTGACAGCA GTATATACTT GGCAAATAGT 3000
GATTATTCTT CTGAAATCTG CCAGAATGGG CAGCAATCTC GGCATGTACA GAATAAAGAA 3060
ACATTTCCCA ATTTAGCTGA AGAATCTATT TGGAGAATGA TTCAACAAAC ACCTGAGTGC 3120
ATTCTAATGA CGTATCAGGT ACCTGAGAGG ATTAAAGAAG TTGTACTAAA AGAAGACCTC 3180
AGAAAGCTAG AAAGCATGAG GCACCAACAG CCCCAGTTTT CTCATGGACA AATGGAGGAG 3240
CTGGCCAACG TGTATACTTG GATTCAAAGG CAGACTATTC CTCAAGAAAT AGACACTCAA 3300
GGCTGCATCA CTTGCAAAAG CAAAGATTCA GTTGATCCTG CTACAGAGTT CTGTGGTCAT 3360
GATCCAGCGG AGGATGGCAG TTGA 3384
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-CaE-021686Caenorhabditis elegans20.93 2.00e-13 75.48
CGD-GaG-020965Gallus gallus59.21 1.00e-172 603.6
CGD-MuM-021078Mus musculus (Mouse)64.69 0.00e+00 862.1
CGD-OvA-022195Ovis aries64.5 0.00e+00 857.1
CGD-RaN-021797Rattus norvegicus65.01 0.00e+00 869.8
Gene Ontology

GO:0005515--protein binding
GO:0045187--regulation of circadian sleep/wake cycle, sleep
GO:0007623--circadian rhythm
GO:0019900--kinase binding
GO:0031625--ubiquitin protein ligase binding
GO:0000122--negative regulation of transcription from RNA polymerase II promoter