CGDB Gene Information

Tag Content
CGDB ID CGD-ChH-060322
Ensembl Accession ENSCHOP00000006567.1
Protein Name PER3
Ensembl Information ENSCHOG00000007396; ENSCHOT00000007437
Organism Choloepus hoffmanni
NCBI Taxa ID 9358
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 15 ZT 9 LD 6 duodenum Predicted from orthologs E1C8E2
ZT 0 ZT 12 LD 5 pineal gland Predicted from orthologs E1C8E2
ZT 8 ZT 0 LD 4.6 brown adipose tissue Predicted from orthologs O70361
ZT 8 ZT 0 LD 2.46 epididymal white adipose tissue Predicted from orthologs O70361
ZT 12 ZT 0 LD 10 femur vertebra Predicted from orthologs O70361
ZT 8 ZT 4 LD 5.2 heart Predicted from orthologs O70361
ZT 12 ZT 0 LD 35 jejunum Predicted from orthologs O70361
CT 9 CT 21 DD1 2 SCN Predicted from orthologs O70361
ZT 8 ZT 16 LD 2.5 SCN Predicted from orthologs O70361
CT 15 CT 3 DD1 2 testis Predicted from orthologs O70361
CT 15 CT 3 DD1 4 liver Predicted from orthologs O70361
ZT 8 ZT 0 LD 14 lumbar vertebra Predicted from orthologs O70361
CT 0 CT 12 DD2 8.8 NIH-3T3 cells Predicted from orthologs O70361
ZT 8 ZT 0 LD 23 liver Predicted from orthologs O70361
ZT 6 ZT 18 LD 4 muscle Predicted from orthologs W5PL09
ZT 12 ZT 0 LD 25 abdominal adipose tissue Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 2.3 basolateral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 12 ZT 0 LD 5 entral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 4.5 hippocampus Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 14 nucleus accumbens core Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 5 nucleus accumbens shell Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 8 prefrontal cortex Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 6 SCN Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 2 ventral tegmental area Predicted from orthologs Q8CJE2
Descriptionperiod circadian clock 3 [Source:HGNC Symbol;Acc:HGNC:8847](View all)
Protein Sequence
(Fasta)		 SSEFFPILSQ NGAPQADWTM YSLEELATVA SEHTSKNTXX XXXXXXXXXX XXXXXXXXXX 60
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 120
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXPRIPVDK 180
RIFTTTHTTG CIFLEVDEXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXLKYAG 240
QPPFEHTIRF CTQNGDYILD SSWSSFVNPW SRKVSFIIGR HKVRTSPLNE DVFATRIKRT 300
NDNSKDITEL QEQIHKLLLE PVHVSASSGY GSLGSSGSQE PYISVASSSE SSGHCPEEPQ 360
EEPMTLQQVY ARINNIKNLG QQLYIDSLTK SPNKXXXXXX XXXXXXXXXX XXXXQQKPYS 420
SLQTVKNNSM YAESCEDLRK DQHSPSYQQI NCIDSIIRYL KSYNIPALKR KCVSCTNTTL 480
SSSEADRQNQ QTDVQALPAV SQIPVTAKPE MMTSGPSASA EQGAPQTLPD KVLSWVSGIS 540
QCSYSSTIVH APPPESVEDA TPACELWALN TQTASPTSEE FKQVGLTKTV LSAHTQKEER 600
NYVDKFREKI LLSPYSSYLQ QENRSKGKHS YVQGDSPSKQ TRSTGGKKGR HKRKKLPVPL 660
DSSSSQDSVH PHSRKVVRQV QAWSPSTDSS PPACGLRLPS AAMVPSLTPG PVPAFPLPAV 720
APLERECAAP AAVLGFSPAP PLPSSLQSLP AFPSPYMNMF MTIFLHEFPT CPLQSSSSSP 780
CPFLGATDSS EMPPSVSSVT PDLEPLPSGI HQQRVEEKWE SQSEAHPFIN SRSSSPLHLN 840
LLQEIPRLSE SVQMKRXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 900
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 960
XXXXXXXXXX XXXXSGDGSI HFASSDYSEI SQNGLKSQDV QEEETFPNLA VESIWRMIEH 1020
TPEGILMTYQ VPERVKEVVL KEDLEKLDSM RQQQPRFSLG QKEELAQVHS WIRSQTLPQE 1080
IDIQGCATCG NQGAGSGSAG LGEQGPAEDS R 1111
Nucleotide Sequence
(Fasta)		 AGCAGTGAGT TTTTCCCGAT TCTCAGTCAG AATGGAGCAC CTCAAGCAGA TTGGACCATG 60
TACAGTCTTG AGGAGCTGGC CACTGTTGCT TCAGAACACA CTTCCAAAAA CACANNNNNN 120
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 180
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 240
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 300
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 360
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 420
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 480
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNCTC CTCGAATTCC AGTGGATAAA 540
AGAATATTTA CCACAACACA CACCACAGGG TGTATTTTTC TTGAAGTAGA TGAAAGNNNN 600
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 660
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNGTCTGAA GTATGCAGGC 720
CAGCCTCCCT TTGAACATAC CATTAGATTT TGCACTCAGA ATGGAGATTA CATCCTGGAT 780
TCCAGTTGGT CCAGCTTTGT GAACCCATGG AGCCGAAAGG TTTCATTCAT TATCGGTCGG 840
CATAAAGTTC GAACGAGTCC ACTGAATGAG GATGTTTTTG CTACCAGAAT AAAAAGGACG 900
AACGATAATA GCAAAGACAT AACAGAATTA CAAGAACAAA TTCACAAGCT TCTCTTGGAG 960
CCAGTTCACG TGAGCGCTTC CAGTGGCTAT GGAAGTCTGG GAAGCAGTGG CTCCCAGGAG 1020
CCTTACATTA GTGTGGCATC GTCGAGCGAG TCCAGTGGAC ACTGCCCAGA GGAGCCCCAG 1080
GAGGAGCCTA TGACCTTGCA GCAAGTTTAT GCCCGTATAA ACAATATAAA GAACCTAGGT 1140
CAGCAGCTCT ACATCGATTC ACTGACCAAA TCGCCAAACA AGCNNNNNNN NNNNNNNNNN 1200
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN ATCAGCAGAA GCCGTATTCG 1260
TCTCTACAGA CAGTGAAAAA TAATAGCATG TATGCTGAGT CTTGTGAGGA TTTGAGAAAA 1320
GATCAACATA GCCCATCCTA TCAGCAAATA AACTGTATCG ATAGTATTAT CAGGTACCTG 1380
AAGAGCTACA ACATTCCAGC TTTGAAGAGA AAGTGTGTGT CCTGTACAAA CACCACGTTG 1440
TCATCCTCAG AGGCCGACAG GCAGAACCAG CAGACAGACG TGCAGGCATT GCCAGCTGTT 1500
TCCCAGATCC CCGTCACTGC CAAACCGGAA ATGATGACCT CTGGGCCGTC CGCATCCGCG 1560
GAGCAAGGGG CCCCCCAGAC CCTGCCCGAC AAGGTGCTGA GCTGGGTGTC GGGCATCAGC 1620
CAGTGCAGCT ACAGCAGCAC CATCGTTCAC GCCCCCCCGC CGGAGTCAGT CGAGGATGCC 1680
ACCCCAGCGT GTGAACTGTG GGCTCTCAAT ACCCAGACAG CATCTCCAAC CTCTGAAGAA 1740
TTTAAACAAG TAGGTCTCAC AAAAACTGTT CTGTCAGCCC ACACGCAGAA GGAAGAAAGA 1800
AATTATGTTG ATAAATTCCG AGAAAAGATC CTGTTGTCAC CCTACAGCTC CTATTTACAG 1860
CAAGAAAACA GAAGCAAAGG TAAACATTCA TATGTTCAAG GAGATTCTCC TTCCAAGCAG 1920
ACCAGATCCA CTGGTGGCAA GAAAGGGAGG CACAAACGCA AGAAGCTGCC AGTGCCATTG 1980
GACAGCAGTA GCTCTCAGGA TAGTGTCCAT CCTCACTCCA GGAAAGTGGT TCGGCAGGTG 2040
CAGGCCTGGA GCCCCTCCAC TGACTCCTCT CCGCCTGCCT GTGGCCTGCG CCTCCCTTCT 2100
GCGGCGATGG TCCCCAGTCT GACCCCTGGC CCAGTGCCAG CTTTCCCCCT CCCAGCTGTG 2160
GCTCCCCTGG AGAGAGAATG TGCAGCCCCG GCAGCTGTCC TGGGGTTCTC CCCTGCACCA 2220
CCGCTCCCCA GCAGCTTGCA GTCTCTCCCA GCTTTTCCTT CTCCTTACAT GAACATGTTT 2280
ATGACCATTT TCCTGCACGA ATTCCCTACC TGTCCTCTAC AATCATCCTC ATCCTCTCCA 2340
TGTCCATTCT TGGGAGCAAC CGACTCTTCT GAAATGCCAC CCTCAGTATC ATCAGTAACT 2400
CCAGACCTAG AGCCACTGCC CTCAGGAATC CACCAACAGA GAGTTGAGGA AAAATGGGAG 2460
TCTCAAAGTG AAGCGCACCC ATTTATTAAC TCACGGAGCA GCTCACCACT GCATTTAAAC 2520
TTGCTTCAGG AAATTCCCAG ACTTTCTGAA TCTGTTCAGA TGAAAAGGNN NNNNNNNNNN 2580
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2640
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2700
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2760
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2820
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2880
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN GAAGCGGTGA TGGCAGTATA 2940
CACTTCGCCA GCAGTGATTA TTCTGAAATC TCCCAGAATG GGCTGAAATC TCAGGATGTA 3000
CAGGAAGAAG AAACCTTCCC CAATTTAGCT GTAGAGTCCA TCTGGAGAAT GATAGAGCAC 3060
ACACCGGAGG GCATCCTGAT GACCTATCAG GTACCTGAGA GAGTTAAAGA AGTTGTACTG 3120
AAAGAAGACC TAGAAAAGCT GGATAGCATG AGGCAGCAGC AGCCCCGGTT TTCTCTTGGA 3180
CAGAAGGAGG AGCTAGCCCA GGTGCATTCT TGGATTCGGA GCCAGACTCT CCCTCAGGAA 3240
ATAGACATCC AGGGCTGTGC CACCTGCGGG AACCAGGGTG CGGGCAGCGG CTCTGCAGGA 3300
CTCGGCGAGC AGGGACCAGC CGAGGACAGC CGCTGA 3336
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-GaG-020965Gallus gallus50.52 2.00e-111 400.6
CGD-MuM-021078Mus musculus (Mouse)47.9 8.00e-159 559.3
CGD-OvA-022195Ovis aries49.93 2.00e-164 577
CGD-RaN-021797Rattus norvegicus49.85 1.00e-162 571.2
Gene Ontology

GO:0045187--regulation of circadian sleep/wake cycle, sleep
GO:0005515--protein binding
GO:0000122--negative regulation of transcription from RNA polymerase II promoter
GO:0031625--ubiquitin protein ligase binding
GO:0019900--kinase binding
GO:0007623--circadian rhythm