CGDB Gene Information

Tag Content
CGDB ID CGD-IcT-051943
Ensembl Accession ENSSTOP00000012561.2
Protein Name PER3
Ensembl Information ENSSTOG00000014007; ENSSTOT00000014020
Organism Ictidomys tridecemlineatus
NCBI Taxa ID 43179
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 15 ZT 9 LD 6 duodenum Predicted from orthologs E1C8E2
ZT 0 ZT 12 LD 5 pineal gland Predicted from orthologs E1C8E2
ZT 15 ZT 3 LD 2 blood Predicted from orthologs P56645
CT 16 CT 4 DD2 2.7 human HaCaT keratinocytes Predicted from orthologs P56645
ZT 4 ZT 21 LD 3.5 human HaCaT keratinocytes Predicted from orthologs P56645
ZT 8 ZT 0 LD 4.6 brown adipose tissue Predicted from orthologs O70361
ZT 8 ZT 0 LD 2.46 epididymal white adipose tissue Predicted from orthologs O70361
ZT 12 ZT 0 LD 10 femur vertebra Predicted from orthologs O70361
ZT 8 ZT 4 LD 5.2 heart Predicted from orthologs O70361
ZT 12 ZT 0 LD 35 jejunum Predicted from orthologs O70361
CT 9 CT 21 DD1 2 SCN Predicted from orthologs O70361
ZT 8 ZT 16 LD 2.5 SCN Predicted from orthologs O70361
CT 15 CT 3 DD1 2 testis Predicted from orthologs O70361
CT 15 CT 3 DD1 4 liver Predicted from orthologs O70361
ZT 8 ZT 0 LD 14 lumbar vertebra Predicted from orthologs O70361
CT 0 CT 12 DD2 8.8 NIH-3T3 cells Predicted from orthologs O70361
ZT 8 ZT 0 LD 23 liver Predicted from orthologs O70361
ZT 6 ZT 18 LD 4 muscle Predicted from orthologs W5PL09
ZT 12 ZT 0 LD 25 abdominal adipose tissue Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 2.3 basolateral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 12 ZT 0 LD 5 entral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 4.5 hippocampus Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 14 nucleus accumbens core Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 5 nucleus accumbens shell Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 8 prefrontal cortex Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 6 SCN Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 2 ventral tegmental area Predicted from orthologs Q8CJE2
Descriptionperiod circadian clock 3 [Source:HGNC Symbol;Acc:HGNC:8847](View all)
Protein Sequence
(Fasta)		 SREQDRNRVS EELLMVVQEM KKYFPAERRS KPSTLDALNY ALRCVRSVQA NSEFFQIHNL 60
NGAPEREVTV YSLKELATVA SELTSKNTDT FVAVFSFLSG RLVHISEQAA LILNCKKDFL 120
KSCHFVDLLA PQDVRVFYTH TARAQLPFWS SWSQRASQYE CAPVKPFFCR IRGGGGREHE 180
KHYSPFRIIP YLVHVHSSTQ PESEPCCLTL VEKIHSGYEA PRIPVDKRIF TTTHTPGCVF 240
LEIDERAVPL LGYLPQDLTG TSVLACLHPE DRPLMVTMHQ KVLKYAGHPP FEHSPIRFCT 300
QNGDYIILDS SWSSFVNPWS RKVSFIIGRH KVRTSPLNED VFATRIKKTN SNEKDITELQ 360
EQIHRLLLQP VHVSTSSGYG SLGSSGSQEL QVSVDSSSES SGHCLEEVQK EPMTLKQVYS 420
SVNKIKNLGQ QLYIDSMARS SVKPVMGTCP EPSGGDEQKA SSSSLTLKNK CTCTEFCEDL 480
RKDQHSSSYQ QMNCIDSVIR YLKSYHIPAL KRKCVSSTNT MASSSEEEKP SHQADDTQAV 540
QAVAQTPAMP QPKVPTNGRP TEAEADLAGT LSTATLSLGS GTSQCSCSST IVHVPPPEPA 600
EDAALGCEPW TLNTQPAPFT AEEFKHVGLT TASLSAHTQR EEQDYVDRFR KKILSSPYSC 660
CLHRESSSKA RRSCVQGDFT SKQSRLAGCR KGKHKRTKPP VPLGSSSSSD SFHSQAGGPL 720
QDVLPWCPST PSSACASGLG FPAAVMVPSQ SSYLLPAFPL PAWAATPECP PKPPVSSGLQ 780
HLPALPSLHV DTLMTFFLHN PRICPLWSPS FSPYPFLGAT DSSEILPSVS AVAPNLEPPP 840
SVNSGRVEEN WEMQKEEHLF ISSRSSSPLQ LDLLHEDMPA SPEPPDAVRR DAGPEATDHC 900
VSGGGGSRSS SAAGDLSPAP PHKVSPSGAG SAASGSGSGK PLLQTLLSRG CCVEGHLTEA 960
LVSGPPAGLV VRSSWPPQTW KSVFSSVVDF FSGSSSSCIF FTSTDYSSES SENGQQSQDT 1020
QKTSAFHSLA EDPIWKMIAQ TPECVLMTYQ VPERVKEVVL KEDLEKLESL RQQQPQFSPG 1080
QKEELAKVHP WIQSQTVPGG MHVQSCATCE DGGSAGDTAE APGRIQEKTA AEPP 1134
Nucleotide Sequence
(Fasta)		 CTCTGGGGCA GGGACTGGGA GAGCAGGACT CGGCCCTTTT GATCTTGAGT TCTTAACCCC 60
GGGAGAAAGA GCGGAGAGAG ATCAGGGCGA AGGGATCTGG GTCCCGCAGA CGGGGACTAG 120
AGTACAGCGG AGCTACAGAG TGGCCGAGAG GTCCCCTGAG GTCGGGCCAG GTGGGAAGTA 180
GGAGTGGAGA GTGACGTCTT CTGTCTCTTT GCCCGCAATC CCAGCATCTC GGGAAGTTGA 240
GGCAGGATGG CGAGTTTGAG GCCAGCCCTG GAACTCAGAC CCTGTCTCGG AGAGGACTGG 300
GTATGTGCTC CAGGGCGAAG CGCGCCTGGG TTCATCCCCA GTGCCAAAAG GAAAAGGAAA 360
AAAAAAGCAT AAACAAATGA AAGAGTCGAT GTGCACAGTG ACCCTGGAAA GTAATTTGTT 420
GTCCCTTTAT GTGCAACATT GTTACTTCTC ATTTTTTTTA ATATCTATCT TTTTAGTTGT 480
AGTTGGACAC GACATCTTTA TTTTTATGTG GTGCTGAGGA TCGAGCCCAG GGCCTCGCAC 540
GTGCTAGGCG AACGCTCTAC CGCTGAGCCA CAACCCCAGC CCCTATTTCT CATTTTTTGT 600
CTTCCAGGGA ACAAGATCGA AACAGAGTTT CAGAAGAACT TCTAATGGTT GTCCAAGAAA 660
TGAAAAAATA CTTCCCAGCC GAGAGACGCA GTAAACCAAG CACCCTGGAC GCCCTCAACT 720
ATGCCCTTCG CTGCGTGCGC AGTGTGCAAG CAAACAGTGA ATTTTTCCAG ATTCACAATC 780
TAAACGGAGC ACCTGAGAGG GAAGTGACTG TGTACAGTCT GAAGGAGCTG GCCACTGTTG 840
CTTCTGAACT CACTTCTAAG AACACAGATA CCTTTGTGGC CGTGTTTTCG TTTCTTTCTG 900
GAAGGTTAGT GCACATATCT GAGCAGGCTG CTTTGATCCT GAATTGTAAG AAAGATTTCT 960
TGAAGTCCTG TCACTTTGTT GACCTGCTTG CCCCTCAAGA CGTGAGGGTG TTCTACACAC 1020
ACACCGCCCG AGCTCAGCTT CCTTTCTGGA GCAGCTGGAG CCAAAGAGCA TCACAGTACG 1080
AATGTGCTCC AGTGAAGCCC TTCTTCTGCA GGATCCGTGG AGGTGGAGGC AGAGAGCACG 1140
AGAAGCATTA CTCCCCGTTC CGGATCATCC CCTATTTGGT TCATGTACAT AGCTCTACCC 1200
AACCAGAATC AGAACCTTGC TGTCTAACGC TGGTTGAGAA GATTCACTCT GGTTATGAAG 1260
CTCCTCGAAT CCCAGTGGAT AAAAGAATTT TTACCACAAC ACACACCCCA GGGTGTGTGT 1320
TTCTTGAAAT AGATGAAAGA GCAGTGCCTT TGCTGGGCTA CCTCCCTCAG GATCTGACCG 1380
GAACCTCTGT GTTAGCATGC CTGCACCCCG AAGACCGGCC TCTGATGGTC ACCATGCACC 1440
AGAAAGTCTT GAAGTATGCA GGCCACCCTC CCTTTGAACA CTCACCCATT AGATTCTGTA 1500
CTCAAAATGG AGATTACATC ATACTGGATT CCAGCTGGTC CAGCTTTGTG AACCCCTGGA 1560
GCCGGAAGGT TTCCTTCATC ATTGGTCGGC ATAAAGTTCG GACGAGTCCA CTAAATGAGG 1620
ATGTTTTTGC TACAAGAATA AAAAAGACGA ACAGTAATGA AAAAGACATA ACAGAATTAC 1680
AAGAACAAAT TCATAGACTT CTGTTGCAGC CTGTTCACGT GAGCACTTCC AGTGGCTATG 1740
GGAGCCTGGG AAGCAGTGGT TCGCAGGAGC TCCAGGTCAG CGTGGACTCT TCCAGCGAGT 1800
CGAGCGGGCA TTGCCTGGAG GAAGTGCAGA AGGAGCCGAT GACCTTGAAG CAGGTCTACT 1860
CCAGTGTGAA CAAAATTAAG AATCTGGGTC AGCAGCTCTA CATCGACTCA ATGGCCAGGT 1920
CGTCAGTCAA GCCAGTGATG GGGACATGCC CAGAGCCCTC TGGTGGTGAT GAACAGAAGG 1980
CCTCTTCTTC CTCCCTGACA CTGAAAAATA AATGCACGTG CACTGAGTTT TGTGAGGATT 2040
TGAGGAAAGA CCAGCACAGC TCATCATATC AACAGATGAA CTGTATTGAC AGTGTCATCA 2100
GGTACCTAAA GAGCTACCAC ATCCCAGCTC TGAAAAGAAA GTGTGTGTCC TCCACAAACA 2160
CCATGGCTTC GTCATCAGAA GAGGAGAAGC CGAGCCACCA GGCAGACGAC ACCCAAGCAG 2220
TGCAAGCTGT CGCACAGACC CCTGCCATGC CGCAGCCGAA AGTGCCCACA AATGGACGGC 2280
CCACCGAGGC TGAAGCAGAC CTGGCCGGAA CCCTGTCCAC TGCCACACTG AGCCTGGGGT 2340
CAGGCACCAG CCAGTGCAGC TGCAGCAGCA CCATCGTCCA TGTCCCACCC CCAGAGCCAG 2400
CAGAGGATGC TGCCCTAGGA TGCGAACCCT GGACCCTAAA CACCCAGCCA GCTCCTTTCA 2460
CTGCAGAAGA ATTCAAACAT GTAGGGCTCA CAACCGCCTC TCTGTCAGCC CACACGCAGA 2520
GAGAAGAACA GGATTATGTG GACAGGTTCC GGAAAAAGAT CCTCTCCTCG CCCTATAGCT 2580
GCTGTCTTCA TCGCGAAAGC AGCAGCAAGG CCAGACGCTC CTGTGTTCAA GGAGATTTCA 2640
CTTCCAAGCA GAGCAGGTTA GCAGGATGCA GAAAGGGGAA GCACAAACGA ACGAAGCCAC 2700
CAGTGCCCTT GGGCAGTAGC AGCTCCAGTG ACAGCTTCCA TTCCCAGGCT GGGGGACCTC 2760
TTCAGGATGT GCTCCCCTGG TGCCCTTCCA CCCCGTCTTC TGCCTGCGCC TCGGGCCTGG 2820
GGTTCCCAGC TGCTGTGATG GTTCCCAGCC AGTCCTCTTA CCTCCTTCCA GCTTTTCCCC 2880
TGCCAGCCTG GGCAGCTACG CCTGAATGTC CACCTAAGCC ACCTGTGTCC AGTGGCCTGC 2940
AGCATCTGCC TGCTCTCCCT TCCCTGCACG TGGATACTTT GATGACCTTT TTCTTGCACA 3000
ACCCCCGTAT CTGTCCTCTG TGGTCACCAT CATTCTCTCC ATATCCATTC TTGGGAGCCA 3060
CAGACTCTTC TGAAATTCTT CCCTCGGTAT CAGCAGTGGC TCCAAACCTG GAACCACCTC 3120
CTTCAGTCAA CAGTGGGAGA GTGGAGGAAA ATTGGGAGAT GCAAAAGGAA GAGCACCTGT 3180
TCATCAGTTC TCGGAGCAGC TCACCACTGC AGCTAGACCT ACTCCATGAA GATATGCCCG 3240
CGTCTCCTGA GCCTCCAGAC GCAGTGAGAA GGGATGCTGG CCCCGAGGCC ACAGACCACT 3300
GTGTTTCAGG TGGCGGTGGC AGCAGGAGCA GTTCTGCTGC TGGTGACCTC TCCCCAGCCC 3360
CACCCCACAA GGTGTCTCCA TCTGGAGCTG GTTCTGCAGC CTCAGGTAGT GGATCTGGGA 3420
AACCGCTTCT TCAGACTCTG TTGTCCAGAG GTTGCTGTGT TGAGGGCCAT CTGACTGAGG 3480
CACTGGTGTC CGGGCCGCCT GCTGGGCTGG TGGTGAGGAG CAGCTGGCCA CCGCAGACCT 3540
GGAAGTCAGT CTTTTCATCT GTTGTTGATT TTTTTTCAGG AAGCAGTAGT AGCTGCATCT 3600
TCTTCACTAG TACTGATTAT TCTTCTGAAA GCTCTGAAAA TGGGCAACAA TCTCAGGATA 3660
CACAGAAAAC AAGCGCCTTT CACAGTTTAG CTGAGGATCC CATCTGGAAA ATGATAGCAC 3720
AGACTCCTGA GTGTGTTCTG ATGACGTATC AGGTGCCAGA GAGGGTTAAG GAAGTTGTGC 3780
TAAAAGAAGA TCTAGAAAAA CTGGAAAGCC TAAGACAGCA ACAGCCCCAG TTTTCTCCTG 3840
GGCAGAAGGA AGAGCTAGCC AAGGTGCATC CTTGGATTCA AAGCCAGACT GTCCCTGGAG 3900
GAATGCATGT CCAAAGCTGC GCCACCTGTG AAGACGGAGG TTCAGCTGGT GACACTGCAG 3960
AGGCCCCTGG CCGCATCCAG GAGAAGACAG CAGCTGAGCC ACCATGAGGA TGTCCCTGTA 4020
CAAGCTTTCC AGGGCTCGTG TGACAGACCT CCCTATGTGT CTCTAAAGCT CGACTCACAA 4080
GTGACCACAA AGTCATCATC AACATAAGAC TTCCCACCGT GCTTTTTTAA CAGACGTCAT 4140
TTTTCTGAAG CAGAAGCAGC ATTGTATATC GAATCTTGTT CCTGATGTGT TAAAACTGCC 4200
AATTAGACTC CTTTTCTAGT TTAGCTGTCT TCTAGAGAGA TTGGATTGCC TTTAAGAG 4258
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-GaG-020965Gallus gallus46.11 0.00e+00 716.1
CGD-HoS-021431Homo sapiens (Human)57.34 0.00e+00 1232.6
CGD-MuM-021078Mus musculus (Mouse)63.23 0.00e+00 1099.7
CGD-OvA-022195Ovis aries59.28 0.00e+00 1012.3
CGD-RaN-021797Rattus norvegicus56.56 0.00e+00 1176
Gene Ontology

GO:0032922--circadian regulation of gene expression
GO:0005515--protein binding
GO:0045187--regulation of circadian sleep/wake cycle, sleep
GO:0000122--negative regulation of transcription from RNA polymerase II promoter
GO:0031625--ubiquitin protein ligase binding
GO:0019900--kinase binding
GO:0007623--circadian rhythm