CGDB Gene Information


Tag Content
CGDB ID CGD-PoF-071349
Ensembl Accession ENSPFOP00000017494.2
Protein Name per3
Ensembl Information ENSPFOG00000017337; ENSPFOT00000017516
Organism Poecilia formosa
NCBI Taxa ID 48698
Circadian Information
Phase Amplitude
(FOLD)
Tissue/Cell Evidence
Peak Trough External
condition
ZT 15 ZT 9 LD 6 duodenum Predicted from orthologs E1C8E2
ZT 0 ZT 12 LD 5 pineal gland Predicted from orthologs E1C8E2
Descriptionperiod circadian clock 3 [Source:ZFIN;Acc:ZDB-GENE-000804-1](View all)
Protein Sequence
(Fasta)
MLLMYDQSAV MSGGDGGQGG EEPALPLGPA EGEGAGGGPS GHQDGQLQLL TAEGQGALAG 60
DVGQEDEEMT STSNDLSSST NESPRSARGC PSPSTKSSEL AVRGRGHAHR EVVSTVAEMK 120
KRLPSDKRSH SKPRTVEALN YALNCVKQVQ ANSEYYKLLM QNGQDQRKDA TVCTLEELER 180
VTSEHNLKNT DSFVMVFSLS SGRVLYTSEQ APSLLCCKRK YLESAKFVEL LFHQDVNVFY 240
SHTAQPHLPP WSNSHSAGVL FDSAQVKSFF CRIRGSKDRD GEMRYNPFRI TPYLLKVQGT 300
GSGEEEEEEE EEPCCLMLAE RIISGYEAPR IPMDKRIFTT THSPGCVFLE VDDRAVPLLG 360
YMPQDLIGSS LLTCIHPEDR PLMLSMHRQI LKYAGQSPFE HSPVRLRCQN GDYVTLDTSW 420
SSFINPWSRK VAFIIGRHKV RTSPLNEDVF AARTKDYAPV TYEEIKDLQA KIYKLFLQPV 480
HNNGSSGYGS LGSNGSHEHY VSFASSSESN GNLWEDSNRE PMTLQQICAD VNRSKSWGRH 540
AQLDSGQRSA APGRPNIAAH LHSAAKPEVR GNEESRTQTH IPSYQQINCV DNIIRYLEGC 600
VGQALKRKNE SPSLDTTSSS SSTSEEEKPK GAAGVAPNAP EVVVLDSEVS VGPAAAAVVG 660
APLTDITMSC KAMSVVSVTS QCSYSSTIVH VPQPESEATA LEDAPMGSEP ADPAATPVRP 720
TLSPAAERRL VGLTKEVLSA HTQKEEQEYV DRFRHRILQS PYSSYLQQEN GSMAHSHQPG 780
DYMRPISAGG WKRSRRAKPR HKRPKPQGSS DSYASPTGPS GPVPHSSWPS SESSQPQMAE 840
TYSQTSPVPV PFFPVLGNPA AEQSRPPQPP AATPTVLQPP EQLGYNFNVM PSGQGQPALQ 900
PLQMEPLQNV QNFYNPFPLV PAQSFNPYMP PVMAVILPSY PNSTPGFPSV PSAVPQGPSM 960
ITGYTPGGVS FPQLQPQFQV QTGPHAQMSP GLLLSSQKAA SSVGEEEEAA GPQALFSSSR 1020
SSSPLQLNLL QEELPRQSEG QSSTGLNHPE SLHEQHAIEG DAPSESGNQD AQSTSSELLD 1080
LLLQEDARSG TGSNASGSGS GESGGSLGSG SGSGSNETST SHTGSSHSSK YFASNDSSDT 1140
SRKARKSQEA SVERPHSFET RVESSLWSMI QHTPEQVMMT YQIHTRDQNE VLAEDREKLR 1200
GLQPLQPWFS QEQKEELAKV HPWIKQHTIP QQLDTQGCVS CNSGAGLARS PQPAVSESSL 1260
PAESLQQDSI EPVADVLNGC Q 1281
Nucleotide Sequence
(Fasta)
CGCTCGAGAC ACAGCGTCAT ACCCTTGACT CGGCATTCAC TTGAGTTATT GTCAACTTAT 60
TGTCGCCACA TGGAACCTCT TCCCCCTGAA CTCATGAAGA CACTTCGTCG CAACTTTAAC 120
CGGACAATAT GCTGTTGATG TATGACCAGA GTGCGGTGAT GTCAGGAGGG GATGGGGGTC 180
AAGGCGGAGA GGAGCCGGCA TTGCCATTGG GCCCTGCAGA GGGGGAAGGA GCAGGCGGGG 240
GCCCATCTGG GCATCAGGAT GGGCAACTGC AGCTCCTCAC GGCAGAGGGA CAAGGAGCTT 300
TAGCAGGAGA CGTGGGGCAG GAAGATGAGG AGATGACCAG CACCTCCAAT GATCTTTCTT 360
CCTCAACCAA TGAAAGCCCA AGGAGCGCCA GAGGATGTCC CTCACCGTCG ACCAAGAGCA 420
GCGAGTTGGC TGTCAGGGGA CGAGGCCACG CCCACAGAGA AGTGGTGAGC ACAGTGGCTG 480
AGATGAAAAA GAGGCTTCCG TCCGACAAAC GGAGCCACAG CAAACCCAGG ACTGTGGAGG 540
CCTTAAACTA CGCTCTCAAC TGTGTCAAGC AAGTACAAGC CAACAGTGAA TACTACAAGC 600
TGCTGATGCA GAATGGGCAA GACCAGAGAA AAGATGCCAC TGTTTGCACC TTGGAAGAGC 660
TGGAGAGGGT CACCTCTGAG CACAACCTCA AGAACACGGA TTCCTTTGTG ATGGTGTTCT 720
CTCTCTCGAG CGGCCGCGTG TTGTACACGT CGGAGCAGGC TCCCAGCTTG CTGTGCTGCA 780
AGAGGAAGTA CCTGGAGTCT GCGAAGTTTG TCGAGCTGCT CTTCCACCAA GACGTCAACG 840
TCTTCTACTC GCACACGGCA CAGCCTCACC TGCCACCGTG GAGCAACTCG CACTCCGCTG 900
GAGTTCTGTT TGACAGTGCG CAGGTCAAGT CCTTCTTCTG CAGGATAAGA GGAAGCAAGG 960
ATCGCGACGG CGAGATGCGC TACAACCCTT TCAGGATCAC ACCTTACCTG CTGAAGGTGC 1020
AGGGAACGGG GAGCGGGGAG GAAGAGGAGG AGGAGGAGGA GGAGCCGTGC TGCCTGATGT 1080
TAGCCGAACG AATCATCTCT GGTTATGAAG CACCTCGTAT TCCCATGGAC AAACGTATCT 1140
TCACCACAAC ACACTCCCCT GGCTGTGTTT TCTTGGAAGT TGATGACAGG GCTGTGCCGT 1200
TGCTGGGATA CATGCCTCAG GACCTGATTG GCTCGTCGCT GCTCACTTGC ATCCACCCAG 1260
AGGACCGTCC CCTCATGCTG TCCATGCACA GGCAAATATT AAAGTATGCA GGCCAGTCTC 1320
CGTTTGAGCA CTCTCCAGTG CGTCTGCGCT GTCAGAATGG AGACTACGTC ACCTTGGACA 1380
CCAGCTGGTC CAGTTTTATC AATCCTTGGA GCCGCAAGGT GGCCTTCATC ATTGGACGGC 1440
ACAAAGTCAG AACGAGTCCT CTGAACGAGG ATGTGTTTGC GGCTCGTACA AAGGATTACG 1500
CTCCAGTCAC TTATGAGGAA ATAAAAGACC TTCAAGCCAA GATCTATAAG CTTTTCCTTC 1560
AGCCGGTGCA CAACAATGGC TCCAGCGGTT ACGGCAGTTT GGGAAGTAAC GGCTCCCACG 1620
AGCATTACGT CAGCTTCGCT TCTTCGAGCG AGAGCAACGG CAACCTGTGG GAGGACTCAA 1680
ACCGGGAACC GATGACCTTG CAGCAGATCT GTGCTGACGT GAACAGGTCG AAAAGCTGGG 1740
GCCGACACGC GCAGCTCGAT TCCGGCCAAA GAAGCGCTGC GCCCGGCAGA CCGAACATAG 1800
CGGCCCACCT CCACTCAGCC GCCAAGCCTG AAGTCAGAGG AAATGAAGAA AGCAGGACGC 1860
AAACGCACAT TCCCTCCTAT CAGCAGATCA ACTGTGTGGA CAACATCATC AGATACTTGG 1920
AGGGCTGTGT GGGTCAAGCC CTGAAGCGAA AGAACGAGTC TCCTTCCTTG GACACGACCT 1980
CTTCCTCGTC CTCGACCTCC GAAGAAGAGA AGCCCAAAGG CGCCGCCGGT GTGGCGCCAA 2040
ACGCTCCAGA AGTGGTTGTG TTGGACAGTG AGGTGTCAGT GGGCCCTGCA GCTGCAGCAG 2100
TTGTCGGGGC ACCGCTGACA GACATCACCA TGTCCTGTAA GGCCATGAGT GTTGTCTCGG 2160
TCACTAGCCA GTGTTCGTAC AGCAGCACCA TCGTCCATGT ACCACAGCCT GAGTCAGAGG 2220
CCACTGCGCT GGAGGATGCC CCGATGGGCA GCGAGCCCGC TGACCCTGCA GCGACCCCCG 2280
TCCGCCCAAC CCTGAGTCCC GCTGCGGAGA GAAGGTTGGT CGGGCTCACC AAGGAGGTGC 2340
TGTCGGCTCA CACGCAGAAG GAGGAGCAGG AATATGTTGA TCGTTTCCGC CATCGCATCC 2400
TTCAGAGTCC CTACAGCTCC TATTTGCAGC AGGAAAACGG CTCGATGGCT CACTCTCATC 2460
AACCAGGGGA CTATATGCGT CCAATAAGTG CCGGAGGCTG GAAGCGCTCT CGAAGAGCAA 2520
AGCCCAGACA CAAGCGGCCC AAACCTCAGG GCTCCTCAGA CAGCTACGCC TCCCCGACCG 2580
GCCCCTCCGG CCCCGTCCCC CACTCGTCGT GGCCCTCCTC TGAGTCGTCG CAGCCTCAGA 2640
TGGCAGAGAC TTACAGCCAA ACGTCCCCCG TCCCCGTGCC GTTCTTTCCC GTCCTGGGGA 2700
ATCCAGCCGC CGAGCAGTCC CGACCGCCAC AGCCGCCCGC AGCAACTCCC ACCGTGCTGC 2760
AGCCTCCCGA GCAGCTCGGC TACAACTTCA ACGTCATGCC GTCCGGTCAG GGCCAGCCGG 2820
CCCTGCAGCC GCTTCAGATG GAGCCCCTGC AGAACGTCCA GAACTTTTAC AACCCGTTCC 2880
CGCTGGTTCC AGCCCAGAGC TTCAACCCGT ACATGCCTCC CGTCATGGCC GTCATCCTAC 2940
CTAGCTATCC CAACTCGACT CCGGGCTTTC CCTCCGTTCC CTCAGCTGTA CCTCAAGGAC 3000
CCAGCATGAT AACGGGCTAC ACGCCTGGCG GCGTGTCCTT CCCTCAGCTT CAGCCCCAGT 3060
TTCAGGTCCA GACCGGCCCA CACGCTCAGA TGTCACCAGG CCTGCTTCTT TCCTCGCAGA 3120
AGGCCGCGTC CTCCGTCGGG GAGGAAGAGG AGGCGGCCGG GCCTCAGGCC CTGTTTTCCA 3180
GCTCTCGCTC CAGCTCTCCT TTACAGCTCA ACCTCCTGCA GGAGGAGCTT CCCAGACAGA 3240
GCGAGGGGCA GAGCAGCACT GGACTCAACC ACCCCGAGAG TCTCCACGAG CAACACGCCA 3300
TCGAGGGGGA CGCACCAAGC GAGTCTGGCA ACCAGGACGC CCAGTCGACG TCCAGCGAAC 3360
TGCTGGACCT GCTCCTGCAG GAGGACGCCA GGTCAGGAAC CGGATCCAAT GCTTCAGGAT 3420
CTGGATCAGG GGAATCTGGA GGGTCGCTGG GATCTGGATC CGGCTCCGGC TCCAACGAGA 3480
CGTCCACCTC ACACACCGGC AGCAGCCACA GCAGCAAGTA CTTTGCCAGT AATGACTCGT 3540
CAGACACGTC CCGCAAAGCC CGCAAGAGCC AGGAGGCGTC GGTGGAGCGG CCGCACAGCT 3600
TTGAAACTCG GGTGGAGAGC TCCCTGTGGA GCATGATCCA GCACACGCCT GAGCAGGTCA 3660
TGATGACCTA CCAGATACAC ACAAGGGATC AGAATGAAGT GCTGGCAGAA GACAGAGAAA 3720
AGCTGCGAGG GCTTCAGCCG CTCCAGCCGT GGTTCAGCCA GGAGCAGAAA GAAGAGCTGG 3780
CCAAGGTCCA TCCTTGGATC AAGCAGCACA CCATCCCACA GCAATTAGAC ACACAGGGCT 3840
GCGTGAGCTG CAACTCGGGG GCCGGCCTGG CCCGCTCCCC TCAGCCAGCC GTCTCAGAGA 3900
GTTCATTACC CGCGGAGAGC CTTCAGCAGG ACTCCATCGA ACCTGTGGCT GACGTCTTGA 3960
ACGGCTGCCA GTGAACCAGG CCTGCCAGAA ACTTCAGAAA TACTCTCGGT GCATCTCTTT 4020
TCAACACTCC ACGGTAACGG ATCCTATGGC TTTAATATAT CGTTAACTGG TTTTGTACAG 4080
ACGAGGCGAG GGTCATAAAC GGTGGAGGAG AGCAGAGAGA GAGAGAGACA TGCTACTGGC 4140
CTCTGGGTGG ATTGTACGTC TCTTCTTTTT CTGTTAATCA AGCCCCTGGA GGGATTTGTG 4200
TGATAGTAAT GACTCTACAG ACCTTTTCTC AGTAAGCCAC CTGGTGCTCA GTGTATAAAG 4260
AGAAAAAAAA CAAGGTTTGA GCCCTGTGTA AAGACCTGCA CTACCTTTGT CGCACAAACA 4320
TGACTGACTG AGAAAACCGA AACGACTTGG ATCAAGAACA CCCAGCAAAC TTTTCTCCAG 4380
TGACGCCAAC TCCAGGTTGT ACAGATTTTC TGAACCTCAT CAACACAGCA GCGACCAACC 4440
ATGAGCAGCA TCTTTTTACC CGATGGACAC AAAGACATGT TTGCTGCTCT TGGTTGTTTA 4500
TAACGTTCAG GTAAAAAAAA AAAAAAAAAT CCTACATGTT GTTATTGTAA TGTTATAATC 4560
TCATATCCTG TAGCCTGGTT TCCCAATGTC CAGATCATTC TTTTGTTGTG TTGTGTACTG 4620
TAATGTTGAC TCAAGAAACA ACAGCCAACC AGTTGATCTT TTCAAACGAA CGTCACCCCA 4680
CCTTGCGGAT CCTCCTTCTG CTCAGCCATC AGCCTGTTTG TACCTGTAGT CTAGCTGTGT 4740
TGCTGTGAAG AGGCTCCACG CAGCACCAGA TTTTTCCACT CGTCTCACTT TTACCAACTA 4800
AAGAAGTTTT TCCGGTCAGA CCGCGCAGTA GAAACGGAGA GGAAACTGAC CAATTCTGAG 4860
AGTTTTCCAA ATGAGGATAG CGGGTCCAAA CGCCTTGACT TGTCTGCTTC CTTTGAAACA 4920
CTTGTCCTTC AGCGCAAGAC AGAGCAGGGT TCGTTTCATT TTTGGATCAA AAAATACATG 4980
CCAGTACTGT GTTTTATAGA AAATGTACAC AATTACCTAA TACAAAGTGT ATAAAAAGCC 5040
ATTTGTCTTG AATTCAGGGA TTGTTTGTGA CACAAAAGAA TGAATAAATG ATCTATGAAC 5100
TGAGAATCAT CTGGGCGTGG CTTCTTTTAG TGCTTAGCAT GTAGTACAGC TTTTATATTT 5160
TCTTTTTCTC TGTCCGTATG TGTGTGTGTG TGTGTGTGTC CCGTCTTGGT ATCTCAGATG 5220
TATGATATGG AGAAGCTGGT TGCCTTACAT GTGGCATGGC AGTTTTGCTT TTCAAAAAGA 5280
ATATATCAAG ATGGTGTCGT AACTATGTGA TTGATCAGTA AAGCTGCTGT GGGCAACTTA 5340
AAATTAGTTT TTTTACATAT TTCTTACAAC TACCAGTGGA CTATGTCATG ACGGCATAAC 5400
ATGAGACCAA AAATTTGTGG AAAAAATTGA AGTTTCCCTG CTTCCTCCCC CTGTGATTTT 5460
ACAGCTATAT ACAGAAATGC ACAGCTCTGT CACAAACAAC AAATCAGAGA AAGGAGGGGA 5520
GTCTTTTACT GCTGTCAATC ATCCTCGTGT ACGCACTTCT TCAGTACAGC ATTGTATTTC 5580
ATAGGTAATG TCAGCACAAA GCTTATTTGT GCTTTAACAA ATAAAAATCT CAAAAGTTTG 5640
GCATGCCCTT GTATTTCATT GCATTTGAAA CACATGACTT AAGCGTTACT TTGACTGGAC 5700
CATTCTGTCG CAAGCGGCTG CAGCTTAAAG GTAATCTCAG TTTGAAGACT TTTGAGACCT 5760
CTTACAGGGT GTTCTCCAGG ATTTCCCTCT ATTTCACTAT GTCTTCCCAT GCCACTGCTG 5820
AGCCTCACCA GCATGACGCC ACCACCACTA TGTTTCATGC TTGCATTTGG GCTAAAGGCT 5880
TGGATTCGGC GTAAACTGCA AATGAGACTT TGTGTGGTTT ACTTTAAACA CCAGCTTTTG 5940
TTCTTGCCTA CTTTGCATTA ATGCCAGATA TGTGGATTGA ATAACTAATA ATTATGTTAT 6000
CGAGTTGCTT TGTGATCTGA TTTAAACATC ACTTAATTTT TTCCCCCCCG CCCTGTCTGC 6060
TATGTTCCTC AGTCTTCATG ATGCTGTTTA TTCACTAATA TTCTCAAAAA ACAAAAAATG 6120
AACAAAAAAA AAAAAAAAAA AAAAAACTGA GGAACTCAAA AAACTTCAAA GGGCCTCAAA 6180
ACAGATTCAT ACTGATATTA AATTGCTCTT TCACTCAGGT GATTTCTGTA GGCAGTTTTC 6240
ATTTAGTGTA ACTGGAGTAA AAGTCACAAA AAAACCCAAA ACTTTTTTCT GATTTTTTTT 6300
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-GaG-020965Gallus gallus43.74 0.00e+00 649.8
Gene Ontology

GO:0005515--protein binding
GO:0032922--circadian regulation of gene expression
GO:0006355--regulation of transcription, DNA-templated
GO:0009648--photoperiodism