CGDB Gene Information

Tag Content
CGDB ID CGD-MoD-067747
Ensembl Accession ENSMODP00000031107.2
Protein Name PER3
Ensembl Information ENSMODG00000005802; ENSMODT00000032676
Organism Monodelphis domestica
NCBI Taxa ID 13616
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 12 ZT 0 LD >10 Predicted from orthologs Q65ZG8
ZT 15 ZT 9 LD 6 duodenum Predicted from orthologs E1C8E2
ZT 0 ZT 12 LD 5 pineal gland Predicted from orthologs E1C8E2
ZT 15 ZT 3 LD 2 blood Predicted from orthologs P56645
CT 16 CT 4 DD2 2.7 human HaCaT keratinocytes Predicted from orthologs P56645
ZT 4 ZT 21 LD 3.5 human HaCaT keratinocytes Predicted from orthologs P56645
ZT 8 ZT 0 LD 4.6 brown adipose tissue Predicted from orthologs O70361
ZT 8 ZT 0 LD 2.46 epididymal white adipose tissue Predicted from orthologs O70361
ZT 12 ZT 0 LD 10 femur vertebra Predicted from orthologs O70361
ZT 8 ZT 4 LD 5.2 heart Predicted from orthologs O70361
ZT 12 ZT 0 LD 35 jejunum Predicted from orthologs O70361
CT 9 CT 21 DD1 2 SCN Predicted from orthologs O70361
ZT 8 ZT 16 LD 2.5 SCN Predicted from orthologs O70361
CT 15 CT 3 DD1 2 testis Predicted from orthologs O70361
CT 15 CT 3 DD1 4 liver Predicted from orthologs O70361
ZT 8 ZT 0 LD 14 lumbar vertebra Predicted from orthologs O70361
CT 0 CT 12 DD2 8.8 NIH-3T3 cells Predicted from orthologs O70361
ZT 8 ZT 0 LD 23 liver Predicted from orthologs O70361
ZT 6 ZT 18 LD 4 muscle Predicted from orthologs W5PL09
ZT 12 ZT 0 LD 25 abdominal adipose tissue Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 2.3 basolateral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 12 ZT 0 LD 5 entral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 4.5 hippocampus Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 14 nucleus accumbens core Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 5 nucleus accumbens shell Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 8 prefrontal cortex Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 6 SCN Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 2 ventral tegmental area Predicted from orthologs Q8CJE2
Descriptionperiod circadian clock 3 [Source:HGNC Symbol;Acc:HGNC:8847](View all)
Protein Sequence
(Fasta)		 MQCSKSDGND SSGNEFNGPE SNGTDSLDKE SDEIWKQSFK QQNKTVTDNS EQQDRNKTSE 60
ELMMVVREMK KYLPSERNHK PSILDALNYA LRCVNSVQAN NEFFQILRPN GAHQTDVTKY 120
SLKELATIAS EHTSKNTDTF VAVFSFLSGK LVHVSEQAAL ILNRKKNSLA SSPFVELLDP 180
QDVRVFYAHT AQAHLPFWNV STQTASQYEY SQVKPFFCRI RGGKDREQET YYYPFRITPY 240
LINVYNSTDT ESEPCCLALV EKIHSGYEAP RIPVNKRIFT TTHTPGCMFL EVDERAVPLL 300
GYLPQDLIGT SILMYLHPED RPLMFAVHQK ILKYAGQPPF EHSPIRFCTQ NGDYVILDSS 360
WSSFVNPWSR KVSFIIGRHK VRTSPLNEDV FATRIKNMSS IDKDIMELQD QIYKLLLQPV 420
HVGGSSGYGS LGSNGSQEHY ISIASSSESS GNCVEEIQKE PMTLQQVCAT VNRIKNLGQQ 480
LYIESRTKLS NQQFTISNTE QQGNKKPSHP SSQELRNSSL GTDSCDDLRK DQHVPSYQQI 540
NCVDSIIRYL ESYNIPALKR KCISCTNTTS SSSEEDHISQ RPAGAQALES IPQIPVLATP 600
ARADNEELAL SPKAMSVLSA TSQCSYRSTL VHVPHPESEV TAGDDVIAGN EQAEARSLSL 660
QTFPVAPEEF KQVGLTKAVL SAHTQKEEKN YVDRFREKIL SSPYCSYLQP DGKSKMKYAT 720
IQGDAPSKQA TSAGCKKGKH KRQKLPISSC SSDSRENFPS LLGKPPPGRP PWLPSDLTPP 780
HPCGLLHPPL AGVPMQAPSP VTGFPALPSM SSLRTQYTAS APELGPQPGL HPSYRMQPLP 840
AFPSPYVGAF MTIILHNPPP YPQTCQPFSP PCPFSCVPGS SEIPPPPPPP SSPALPVEDL 900
PEPPSPTSSQ RSAEEEWALQ SEQEHPLFSH SRSSSPLQLN LLQEEMPGAP EPLQYTGSEA 960
DPGAQHQSKA GDNKKSHNSV AKELFTLLLQ KDSPAGAGSV ASGSGSVKSN SSGSDANGSF 1020
SHGTSGCGTG SSDSSKYFAS SDYSSETSQN RQKSEEKETP HKSGRDAIWG MIKQTPECVL 1080
MTYQVPERVK EDVLKEDLEK LESMRQHQPH FTDGQKEELA EVHPWIQSQM VPREIDTHGC 1140
VTCDNKHSLG VGPLPYEKSL EEDIWVTDQE DLPAQPFQDR KL 1182
Nucleotide Sequence
(Fasta)		 CACAAGCTCC TCCCTCTGAC CAATGGGGGC GACTTGGGCT GGGCGCGACA TCCAATGAGG 60
CGCGGAGGGG GCGGGGCCCT GTCACGTTGC AGGCGGGCAT CCGCTTGTGG GGGGGGCGGC 120
CCCGCGGCAC GCGGCTGGCC CCGAGACCTG CGCGCGGGAC CGGCGCGAGC GAGCCAGGAC 180
CGAGAGAGGG CGGAGGCGCG CGGGGGGCCC GGCGGCGGCG GCGGCAGTGG CGGCCGGGTG 240
ATTGAAGTTG TTATGCTTTA GTGGAAATAT AAGATGCTGA AGTTCTTTAT TATGGAAAAT 300
ATCAATTCTA GAAAAAAATT CTCCCTAGTG AATGACAGCA ATTAATTACT CATGCACATT 360
TTGCAAATCA GTGTAACAGA AAATTTTGTG ATAGGTGATG GCTTGGAACA AAATGATAAC 420
TGGAGCATCA TCATTGTTGA TTCCAAAATA GAGAACACAT TCATTTAGAA CCACCAGTAT 480
TTAGAAGTCA AAGAAGGCCA TTCATTGTAA AGGTCTAGAA ATGCAGTGCA GTAAGTCTGA 540
TGGCAATGAC TCCAGTGGAA ATGAATTTAA TGGACCAGAA TCCAATGGGA CTGATTCCCT 600
TGATAAAGAA TCTGATGAGA TATGGAAACA AAGCTTCAAA CAGCAAAACA AAACTGTGAC 660
TGATAACAGT GAACAGCAAG ATCGAAACAA GACTTCTGAA GAACTTATGA TGGTGGTCCG 720
GGAAATGAAA AAATATCTTC CATCAGAGAG AAATCATAAA CCAAGTATTC TTGATGCCCT 780
CAACTATGCC CTTCGATGTG TAAACAGTGT TCAAGCCAAC AATGAGTTTT TCCAGATTCT 840
CAGACCAAAT GGAGCACACC AAACAGATGT AACTAAGTAC AGTCTCAAGG AGCTGGCTAC 900
CATTGCTTCA GAGCACACTT CTAAAAACAC AGACACTTTT GTGGCGGTTT TTTCGTTTCT 960
GTCGGGAAAG TTGGTACATG TTTCAGAGCA GGCTGCTCTT ATACTGAACC GTAAGAAGAA 1020
TTCCCTGGCA TCTTCCCCAT TTGTTGAGCT GCTTGACCCT CAAGATGTGA GGGTATTCTA 1080
CGCACACACA GCCCAGGCCC ATCTTCCATT CTGGAATGTC AGCACCCAAA CAGCCTCCCA 1140
GTATGAATAT TCTCAAGTGA AGCCCTTTTT CTGCAGGATC AGGGGAGGTA AAGACCGAGA 1200
ACAAGAAACC TATTATTATC CGTTCCGGAT CACCCCGTAT TTGATCAATG TATATAATTC 1260
TACTGACACT GAATCAGAAC CCTGCTGTCT TGCTCTCGTT GAGAAGATTC ACTCTGGTTA 1320
TGAAGCTCCC CGGATCCCCG TGAATAAAAG GATCTTTACA ACAACACATA CCCCAGGGTG 1380
TATGTTTCTT GAAGTGGATG AAAGAGCTGT ACCTTTGCTG GGCTACCTCC CTCAGGACCT 1440
GATTGGAACC TCTATCTTAA TGTACCTGCA TCCAGAAGAT CGTCCTCTGA TGTTTGCTGT 1500
CCACCAAAAA ATCTTAAAAT ATGCAGGCCA ACCTCCCTTT GAACATTCAC CCATCAGATT 1560
TTGTACTCAG AATGGAGATT ATGTTATATT GGATTCCAGC TGGTCTAGCT TTGTGAACCC 1620
CTGGAGCCGG AAAGTTTCCT TCATCATTGG CCGGCATAAA GTCCGAACGA GTCCATTAAA 1680
TGAAGATGTT TTTGCCACCA GAATCAAGAA CATGAGCAGT ATTGACAAAG ATATAATGGA 1740
ATTACAAGAT CAAATTTACA AACTTCTCTT GCAGCCGGTT CATGTTGGTG GGTCCAGTGG 1800
CTATGGGAGC TTGGGAAGCA ATGGATCACA GGAGCATTAC ATTAGCATCG CATCATCTAG 1860
TGAATCTAGT GGAAACTGTG TCGAGGAAAT CCAGAAGGAG CCAATGACAT TGCAACAGGT 1920
CTGTGCCACT GTCAACAGAA TCAAAAATCT AGGTCAACAG CTATATATTG AATCAAGGAC 1980
CAAATTATCA AACCAACAGT TTACAATATC AAATACAGAG CAACAAGGCA ACAAAAAGCC 2040
TTCTCATCCT TCATCTCAAG AACTGAGAAA TAGTAGTTTG GGTACTGATT CTTGTGATGA 2100
TTTAAGAAAA GATCAGCATG TTCCATCATA TCAACAGATC AATTGTGTGG ACAGTATTAT 2160
CAGGTATCTG GAGAGCTACA ACATCCCTGC CTTGAAGAGG AAGTGCATCT CCTGCACCAA 2220
CACAACTTCC TCTTCCTCTG AAGAAGACCA CATCAGTCAG AGACCGGCTG GGGCCCAGGC 2280
ACTAGAATCC ATTCCCCAGA TTCCAGTCCT GGCCACACCT GCAAGGGCTG ACAATGAGGA 2340
GTTGGCACTC TCCCCCAAAG CCATGAGTGT GCTCTCTGCC ACAAGCCAGT GCAGCTACCG 2400
GAGCACCCTG GTGCACGTTC CCCACCCTGA ATCAGAGGTG ACTGCTGGAG ATGATGTTAT 2460
TGCAGGAAAT GAGCAGGCTG AGGCCCGGAG TTTGAGTCTC CAGACTTTCC CAGTGGCCCC 2520
AGAGGAGTTT AAGCAAGTAG GACTCACAAA GGCAGTTCTC TCTGCTCATA CACAAAAGGA 2580
AGAGAAGAAC TATGTGGACA GATTTCGAGA AAAGATCCTA TCTTCTCCAT ATTGCTCCTA 2640
CCTTCAGCCA GATGGCAAAA GCAAGATGAA ATATGCCACC ATCCAAGGGG ATGCTCCTTC 2700
CAAGCAGGCC ACATCTGCTG GCTGTAAAAA GGGAAAACAC AAACGCCAGA AGCTCCCAAT 2760
ATCATCTTGT AGCAGCGATT CTCGTGAGAA CTTTCCTTCT CTGCTGGGGA AGCCGCCTCC 2820
AGGCAGACCA CCCTGGTTGC CTTCAGACTT GACCCCTCCT CACCCTTGTG GGTTGCTGCA 2880
CCCTCCTTTA GCAGGAGTTC CCATGCAGGC CCCTTCCCCA GTGACTGGTT TCCCTGCCTT 2940
GCCCTCGATG TCTTCTCTGA GAACACAGTA TACAGCGTCT GCACCTGAAC TGGGGCCTCA 3000
ACCTGGACTG CACCCTTCCT ACAGGATGCA GCCGCTTCCA GCATTCCCTT CTCCTTATGT 3060
GGGTGCTTTT ATGACCATTA TTTTACACAA TCCCCCTCCT TATCCCCAGA CATGTCAGCC 3120
ATTCTCCCCC CCCTGTCCAT TCTCATGTGT GCCTGGGTCG TCTGAAATCC CCCCACCGCC 3180
CCCACCACCC TCGTCACCAG CGCTGCCTGT GGAGGACCTT CCAGAGCCAC CGTCCCCCAC 3240
CTCTAGCCAG AGATCGGCTG AAGAAGAATG GGCGCTCCAG AGCGAGCAGG AGCACCCCTT 3300
GTTTAGTCAT TCCAGGAGCA GCTCCCCCTT ACAGCTAAAC CTGCTCCAGG AAGAAATGCC 3360
GGGGGCCCCC GAGCCTCTGC AGTACACGGG ATCAGAGGCA GACCCAGGAG CCCAGCATCA 3420
GTCTAAGGCA GGAGATAATA AAAAGAGCCA TAATTCTGTG GCCAAGGAGC TGTTCACCCT 3480
GTTACTTCAA AAGGACTCTC CTGCTGGGGC TGGTTCTGTG GCATCAGGTA GTGGGTCTGT 3540
GAAATCAAAC TCCTCAGGCT CCGACGCCAA CGGCTCATTC TCCCATGGCA CATCTGGTTG 3600
TGGCACAGGA AGCAGCGATA GCAGCAAATA CTTTGCAAGC AGCGACTATT CCTCTGAAAC 3660
TTCCCAGAAC AGGCAGAAAT CAGAAGAAAA AGAAACACCT CACAAATCAG GTAGAGATGC 3720
CATCTGGGGA ATGATAAAGC AGACTCCTGA ATGTGTCCTG ATGACTTATC AGGTCCCTGA 3780
GAGGGTTAAA GAAGACGTAT TGAAAGAGGA TCTGGAGAAG CTAGAAAGTA TGAGGCAGCA 3840
CCAGCCTCAT TTCACGGATG GACAGAAAGA AGAGTTGGCC GAAGTGCACC CTTGGATTCA 3900
AAGCCAGATG GTCCCTCGAG AAATAGACAC CCACGGCTGT GTCACATGTG ACAACAAACA 3960
TTCACTAGGT GTTGGGCCTT TGCCTTATGA GAAGAGTCTG GAAGAAGACA TTTGGGTGAC 4020
TGATCAGGAA GATCTACCTG CACAGCCTTT TCAAGACAGA AAGCTTTGAT GCTTTGGACA 4080
CTTATGAAGC CTTGCATATC TTCTAAAAAT CTTGCCTTTT CAGTGACTTT GCAGTTAATA 4140
GTAAATGCTT AGAGCTATCC AAAAGTTTTA TTCCTCAATT TTTGATAGAC TTTTATTTTT 4200
TCAAATAGAA TGAGTTTCCA AATAGAATCT TTTACTCTTA AATTTGAAAT ATGTTCCTAG 4260
TATCTTGAAA CCATCAGTTG CATTTTGTTC CCATTTCAGC CATCACAATT CCAAAGAGGT 4320
TAGATTACAG CATGTGGATG GCAGAGCATG AAATCAGTCT TGCCCACAGG GGATGCAATA 4380
AGGAGTAGGA CTCCAGGCAG CCTGGAGCCT TCCCTGCATT CAATCTATCC CTTCTGGTTG 4440
AATTTGGAGC ATTTGAAGAG ACTGAACTTG GGGCCTGGAA TATTTGTTCT CTTGAATTCA 4500
GCCTATCTAG GCTCCACATT GGGCAAATTA CACCTCCATC CCAAAGAGGT GCTTCCGCCA 4560
ACATTTGTGC TTAAGCAAGA CATTCAGACT AATTTTGCCT TGTTAAGAGT CAGAAGTTAA 4620
GTCAACATTA GTACACCTTA GTAGACAAAC GGACAAGCCT TTTTGTCCTT GTGGGAACAT 4680
GAGCATCAGC ATTTTTTTAG ATTCCATCCT CTTGAGTTTT AGCCTTCCCA GACTTAAGCC 4740
ACTGTCAGTC TCAACATTTT TCCCCTTTGG TTCATTTCAT AAGAGTTGGA GGCAATTTCC 4800
CTACCAGCTC TGAGCCTTCC TTGAGCACCA GAGTCCACTT CTTAGCATTT GAGAACAGCA 4860
CCGTGGAAAT GAGAAGATGC GTGGTTTAGA GGGAAACAGC TGAGCTCTAC TTTGAGTACA 4920
AAATATGCCC TAAACCAAGA TTTCTTAGGT CGCTCCCATT TGAAATATTG TCTGTTTACT 4980
TCACATGCTT GCTAATTCCC TGGTGCTCTA GAGAGTGATC CTTATTTAGA TTTTTAAACG 5040
CATGTGACCT CTGATGACTC AAAAAAGTGG CACCTGGGAG AGACTTTCCT CATTGGTTTA 5100
GGCCAATAAA CAAGGATAAG CTGTTGTCCT TTTGTAGGCA AACACTAAAT CCTACTGGAA 5160
AGTTGTTGAT TTTTGGTGAG CCACTGATAG GTAAAATTGA TTCTTGTGCC ATTCAAATCT 5220
GTTATTAGCA GAGAACTTTG ATGTTCTACA GTGAATGGAT GGTTTCTGAA ACATACATTC 5280
CATTTGTAAA GTTGCATACA TTTTTTCCTA TTTTCTAAAA AAAAGGCCAT TCTGGGATGT 5340
GTCCATTACT GTGTGATTTC CTTGTGACAA TGAACACTGT CAAGTACTCC ACAGAATGCT 5400
GTTTAAAAAA AAAAACCAAT TATTTTACTT GCTCTAATAG TAATAGGAGT CTCTCCCTTC 5460
CTTTTCATTA TTTCCTGGGA TCACTTTTAT CTAAGTTTGC AGATTTATTT GCCTTAGAAT 5520
ACAGTTTACT GAAAGCTCTG GATGGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT 5580
GTGTGTGTGT GTGTGTGTGT TGATCTGAAA GAAGTGTAGC ATCAGATGTA GGAGCATATA 5640
TATATATACG TATATATTTA CAACCATTTA TAAATGAACA CATTTTGATA ACTTCAGTGT 5700
TAGGTTAGAT AGTATTTTTA GATTTTTTAT CTCTGTGAAA TTACTACTGC TGAAAGTAAA 5760
GAGTGTGTTG GTTCAGTAGT GATGTAGTTA CTGCCCCCCA AGGGGGCTCC ACCCAATCTA 5820
GAGCTTTTGC TTGGTGTTTT TATGAATTTG TTACATGCTC ACCTACAGAA ATTTGTTTGA 5880
AAATATATGT TGTCTCTTTC AATGTTTACA CAAATGTTGC TGCTCCAGCA GTTTTTTCCT 5940
TGGACGTGTT GTGAGAATTT CTTTAAAAAA AAAGAAAATA AAATGCTATG TATATGAAAT 6000
GATTCTCTGG CAAAGATGAG GCTTGGTTAT AAATCGCAAG GCAAATCAGA ATTTGAATTT 6060
TTTTTAATGT TTCAACTGAA TTTGTAATTA GCTTTGTGTG GATTTGTTTG TTTTTACTAT 6120
ATATGAATAT TCTGACCAGG TGTCTTGGGG GTTTTTTTAA GTAAAAATAA ATAAAACCAG 6180
CAGTGAACCT CTTTGAAGCC TTCATAAAAT TTCTTTCACT GACACTGACT ACATCTTTAA 6240
ACAATG 6246
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-CaE-021686Caenorhabditis elegans29.27 1.90e-14 78.95
CGD-GaG-020965Gallus gallus47.82 0.00e+00 917.1
CGD-HoS-021431Homo sapiens (Human)57.71 0.00e+00 991.5
CGD-MuM-021078Mus musculus (Mouse)48.43 0.00e+00 941.8
CGD-OvA-022195Ovis aries51.53 0.00e+00 872.1
CGD-RaN-021797Rattus norvegicus49.51 0.00e+00 965.3
Gene Ontology

GO:0005515--protein binding
GO:0032922--circadian regulation of gene expression
GO:0045187--regulation of circadian sleep/wake cycle, sleep
GO:0007623--circadian rhythm
GO:0019900--kinase binding
GO:0031625--ubiquitin protein ligase binding
GO:0000122--negative regulation of transcription from RNA polymerase II promoter
GO:0006355--regulation of transcription, DNA-templated