CGDB Gene Information

Tag Content
CGDB ID CGD-TuT-040951
Ensembl Accession ENSTTRP00000009871.1
Protein Name PER3
Ensembl Information ENSTTRG00000010402; ENSTTRT00000010405
Organism Tursiops truncatus
NCBI Taxa ID 9739
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 15 ZT 9 LD 6 duodenum Predicted from orthologs E1C8E2
ZT 0 ZT 12 LD 5 pineal gland Predicted from orthologs E1C8E2
ZT 8 ZT 0 LD 4.6 brown adipose tissue Predicted from orthologs O70361
ZT 8 ZT 0 LD 2.46 epididymal white adipose tissue Predicted from orthologs O70361
ZT 12 ZT 0 LD 10 femur vertebra Predicted from orthologs O70361
ZT 8 ZT 4 LD 5.2 heart Predicted from orthologs O70361
ZT 12 ZT 0 LD 35 jejunum Predicted from orthologs O70361
CT 9 CT 21 DD1 2 SCN Predicted from orthologs O70361
ZT 8 ZT 16 LD 2.5 SCN Predicted from orthologs O70361
CT 15 CT 3 DD1 2 testis Predicted from orthologs O70361
CT 15 CT 3 DD1 4 liver Predicted from orthologs O70361
ZT 8 ZT 0 LD 14 lumbar vertebra Predicted from orthologs O70361
CT 0 CT 12 DD2 8.8 NIH-3T3 cells Predicted from orthologs O70361
ZT 8 ZT 0 LD 23 liver Predicted from orthologs O70361
ZT 6 ZT 18 LD 4 muscle Predicted from orthologs W5PL09
ZT 12 ZT 0 LD 25 abdominal adipose tissue Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 2.3 basolateral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 12 ZT 0 LD 5 entral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 4.5 hippocampus Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 14 nucleus accumbens core Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 5 nucleus accumbens shell Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 8 prefrontal cortex Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 6 SCN Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 2 ventral tegmental area Predicted from orthologs Q8CJE2
Descriptionperiod circadian clock 3 [Source:HGNC Symbol;Acc:HGNC:8847](View all)
Protein Sequence
(Fasta)		 VSGGKSQDSR RRQPKDEALG KDSAEMWSRK YQLRSKYVQT SNSEPQDQNR VSKDLITVVQ 60
EMKKYFPSER QSKPSTLDAL NYALRCVHSV QANSEFFQIL NQNGAPQADV TMYSLEELAA 120
VASEHTSKNT DTFVAVFSFL SGRLVHVSEQ APLILHCKKE FLESSHFVEL LAPQDVRVFY 180
THTAHAQLPF WNNWTQRAAS RYEFAPVKSF FCRIRGGEAQ ELRQPYCPFR IIPYLIHVHS 240
SARPEPEPCC LTLVEKIHSG YEAPRIPVDK RIFTTTHTPG CVFLEIDERA VPLLGYLPQD 300
LIGTSILTYL HPEDRSLMVA IHQKXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXSFV 360
PWSRKVSFII GRHKVRTSPL NENVFATGIK KMNSNDKDIT ELQEQIHRLL LQPVHGSASS 420
GYGSLGSSGS QEHHLSIASS SESSEHCMEE VQKAPLTLQQ VYASVNKIKN LGQRLYIESR 480
AKSPKKQVME TDPGQRGGES AEQKTFSSFQ TLKNNSMYPE SCEDLRRCQH SPSYQQINCI 540
DSVVRYLKSY DIPALKRKCI SCTNTTSSSS EEDGQSHRAD DVQALQAVSQ IPAVPTSEMP 600
ANGRSTDAEG GAPQALTKEA LSLDGRQCSC SSTVVHMPPL ESAELGILPC EPWTLSTHPA 660
ALASEQFKHT GLTKAVLSAH TQKEEPSYVD QFRDRILSSP YGSYLQQESR SKPTYSDVQG 720
DSASKPTRSA GCRKGKHKRK KLLMWSDSKG TKDDFCPHLI GETQDGQPWC PSSTSSPYAS 780
GPLLQAAVVV PSQAPCLVQA LPLPTMTSLG RERAASETAL QSLPEPPFPN GLQSFPALPS 840
ACLGTFMNIF LHDAPICPLL LPPFSPYPFL GAAGSSEIPA SVSAVPPNPG PPSSAISQRS 900
GEGKWGTQNE GHPLINSKSS SPLQLDLLQE NRPRSCASPE AEYHFTTSEL STVSLHEASP 960
PGAGSAAAGS SGSSINFATS DYSSEIFQNG QQSQDVQKKE TFPNLAEESI WRMIEQTPEC 1020
ILMTYQVPER VKEIVLKEDL ENLESMRRRQ PQFSHGQREE LANVRSWIQS QTIPQEIDIQ 1080
GCVTCENGDS AGDAAESCRP DPAESS 1106
Nucleotide Sequence
(Fasta)		 GTGTCCGGTG GTAAATCTCA GGACTCTAGG CGGAGGCAGC CTAAGGACGA GGCGCTGGGG 60
AAGGACTCTG CTGAGATGTG GAGCCGGAAA TACCAGCTGC GGAGCAAATA CGTGCAGACC 120
AGCAACAGTG AACCCCAAGA TCAAAACAGA GTTTCCAAAG ACCTTATAAC GGTTGTCCAA 180
GAAATGAAAA AATACTTTCC GTCAGAGAGA CAGAGTAAAC CAAGCACCCT GGATGCTCTC 240
AACTATGCCC TTCGCTGCGT ACACAGCGTG CAAGCAAACA GTGAGTTTTT CCAGATTCTC 300
AATCAGAATG GAGCGCCTCA AGCAGACGTG ACCATGTACA GTCTTGAGGA GCTGGCCGCT 360
GTTGCTTCAG AGCACACTTC CAAAAACACA GATACGTTCG TGGCAGTTTT TTCATTTCTG 420
TCTGGAAGGT TAGTGCACGT TTCTGAACAG GCTCCTTTGA TCCTGCACTG TAAGAAAGAG 480
TTCTTAGAGT CCTCTCATTT CGTTGAACTG CTCGCCCCTC AAGACGTGAG GGTGTTCTAC 540
ACGCACACTG CCCATGCTCA GCTTCCTTTC TGGAACAACT GGACCCAAAG AGCAGCCTCA 600
CGCTATGAAT TCGCTCCGGT GAAATCCTTT TTCTGCAGGA TCCGTGGAGG TGAAGCCCAG 660
GAGCTGAGGC AGCCTTACTG CCCGTTCCGG ATTATCCCCT ATTTGATTCA TGTGCACAGC 720
TCGGCCCGCC CGGAGCCTGA GCCCTGCTGT CTCACACTGG TGGAGAAGAT TCATTCTGGT 780
TACGAAGCTC CTCGAATCCC AGTGGATAAA AGAATTTTTA CCACAACACA CACCCCCGGG 840
TGTGTTTTTC TTGAAATAGA TGAAAGAGCA GTGCCTTTGC TGGGTTACCT ACCTCAGGAT 900
CTGATTGGAA CATCCATCCT GACATACCTG CACCCGGAAG ATCGTTCTCT AATGGTCGCC 960
ATACACCAAA AAGNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1020
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NTCATTTGTG 1080
CCATGGAGCC GGAAGGTTTC TTTCATCATC GGTCGGCATA AAGTGCGAAC GAGTCCACTA 1140
AATGAGAATG TTTTTGCCAC CGGAATAAAA AAGATGAACA GTAATGACAA AGACATAACA 1200
GAATTACAAG AACAAATTCA CAGACTTCTC TTACAGCCCG TTCACGGGAG CGCATCCAGT 1260
GGCTATGGGA GCCTGGGGAG CAGCGGGTCT CAGGAGCATC ACCTCAGCAT CGCATCCTCC 1320
AGTGAGTCCA GCGAGCACTG CATGGAGGAG GTGCAGAAGG CACCGTTGAC TTTGCAGCAG 1380
GTCTATGCCA GTGTAAACAA AATCAAGAAT CTAGGCCAGC GGCTGTACAT CGAGTCAAGG 1440
GCCAAATCAC CAAAGAAGCA AGTGATGGAG ACCGACCCGG GACAGCGTGG TGGTGAGTCA 1500
GCAGAGCAGA AGACCTTTTC TTCCTTCCAG ACATTAAAAA ATAATAGCAT GTACCCCGAG 1560
TCTTGTGAGG ATTTGAGAAG GTGTCAGCAT AGCCCATCCT ATCAGCAGAT AAACTGTATT 1620
GATAGCGTTG TCAGGTACCT GAAGAGCTAC GACATTCCAG CTTTGAAGAG AAAGTGTATC 1680
TCCTGTACAA ATACGACTTC CTCGTCCTCG GAAGAAGACG GACAAAGCCA CAGAGCAGAT 1740
GATGTCCAAG CACTGCAAGC TGTTTCTCAG ATCCCAGCCG TACCTACATC AGAAATGCCA 1800
GCTAATGGAC GGTCCACAGA TGCTGAAGGA GGAGCGCCAC AGGCCCTGAC CAAGGAGGCT 1860
CTGAGCCTGG ACGGGAGGCA GTGCAGCTGC AGCAGCACCG TTGTTCACAT GCCACCACTG 1920
GAGTCAGCAG AGCTTGGCAT CCTGCCCTGT GAGCCCTGGA CCCTCAGCAC ACACCCAGCT 1980
GCACTGGCCT CAGAACAGTT TAAACACACA GGGCTCACAA AAGCTGTGCT GTCAGCCCAC 2040
ACGCAGAAGG AAGAGCCGAG TTATGTGGAT CAGTTCCGGG ACAGGATTCT GTCATCGCCC 2100
TACGGCTCCT ATCTTCAGCA AGAAAGCAGG AGCAAACCTA CATATTCAGA TGTTCAAGGA 2160
GATTCTGCTT CCAAGCCTAC CCGATCCGCT GGTTGCAGGA AGGGGAAGCA CAAGCGTAAG 2220
AAGCTGCTCA TGTGGTCGGA CAGCAAGGGC ACTAAGGATG ACTTCTGTCC CCACCTCATA 2280
GGAGAGACCC AGGATGGACA GCCCTGGTGT CCTTCCTCCA CCTCCTCTCC TTATGCCTCT 2340
GGCCCATTGC TCCAGGCTGC AGTGGTGGTT CCCAGCCAGG CACCTTGCCT CGTCCAAGCC 2400
CTTCCCCTCC CAACCATGAC CTCCCTGGGG AGAGAACGTG CAGCCTCAGA AACTGCGTTG 2460
CAGAGTCTGC CTGAGCCGCC TTTCCCCAAT GGCTTGCAGT CTTTCCCAGC TCTGCCCTCT 2520
GCTTGCTTAG GTACTTTTAT GAACATCTTC CTGCATGACG CCCCTATCTG TCCTCTCTTG 2580
TTACCACCAT TCTCCCCATA TCCATTCTTG GGAGCAGCAG GCTCTTCTGA AATACCTGCC 2640
TCGGTATCAG CAGTGCCTCC AAATCCAGGC CCACCATCTT CAGCCATCAG CCAAAGGAGC 2700
GGCGAGGGAA AGTGGGGGAC CCAGAATGAA GGGCACCCCC TCATCAACTC AAAGAGCAGC 2760
TCCCCGCTCC AGCTCGACCT GCTGCAGGAG AACAGGCCCA GATCCTGTGC ATCCCCAGAA 2820
GCTGAGTATC ATTTTACTAC CAGTGAACTG TCTACAGTGT CACTGCATGA GGCTTCTCCG 2880
CCGGGAGCTG GTTCTGCAGC AGCAGGAAGC AGTGGCAGCA GTATAAACTT TGCTACTAGT 2940
GATTATTCTT CTGAAATCTT TCAAAATGGG CAGCAGTCTC AGGATGTACA GAAAAAAGAA 3000
ACATTTCCCA ACTTAGCTGA AGAGTCCATC TGGAGAATGA TAGAACAAAC ACCTGAGTGC 3060
ATTCTGATGA CGTATCAGGT GCCTGAGAGG GTTAAAGAAA TTGTACTGAA AGAAGACCTA 3120
GAAAACCTGG AAAGCATGAG GCGGCGGCAG CCGCAGTTTT CTCACGGACA AAGGGAGGAG 3180
CTGGCCAATG TGCGTTCCTG GATTCAGAGC CAGACGATCC CTCAGGAAAT AGACATCCAG 3240
GGCTGTGTCA CTTGCGAAAA CGGAGATTCA GCTGGTGATG CTGCAGAATC CTGTCGTCCG 3300
GATCCAGCAG AAAGCAGTTG A 3321
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-GaG-020965Gallus gallus42.6 0.00e+00 718
CGD-MuM-021078Mus musculus (Mouse)55.24 0.00e+00 1087.8
CGD-OvA-022195Ovis aries65.86 0.00e+00 1398.6
CGD-RaN-021797Rattus norvegicus54.57 0.00e+00 1062
Gene Ontology

GO:0005515--protein binding
GO:0045187--regulation of circadian sleep/wake cycle, sleep
GO:0007623--circadian rhythm
GO:0019900--kinase binding
GO:0031625--ubiquitin protein ligase binding
GO:0000122--negative regulation of transcription from RNA polymerase II promoter