CGDB Gene Information

Tag Content
CGDB ID CGD-XeT-062261
Ensembl Accession ENSXETP00000010997.2
Protein Name per3
Ensembl Information ENSXETG00000005028; ENSXETT00000010997
Organism Xenopus tropicalis
NCBI Taxa ID 8364
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 15 ZT 9 LD 6 duodenum Predicted from orthologs E1C8E2
ZT 0 ZT 12 LD 5 pineal gland Predicted from orthologs E1C8E2
ZT 15 ZT 3 LD 2 blood Predicted from orthologs P56645
CT 16 CT 4 DD2 2.7 human HaCaT keratinocytes Predicted from orthologs P56645
ZT 4 ZT 21 LD 3.5 human HaCaT keratinocytes Predicted from orthologs P56645
ZT 8 ZT 0 LD 4.6 brown adipose tissue Predicted from orthologs O70361
ZT 8 ZT 0 LD 2.46 epididymal white adipose tissue Predicted from orthologs O70361
ZT 12 ZT 0 LD 10 femur vertebra Predicted from orthologs O70361
ZT 8 ZT 4 LD 5.2 heart Predicted from orthologs O70361
ZT 12 ZT 0 LD 35 jejunum Predicted from orthologs O70361
CT 9 CT 21 DD1 2 SCN Predicted from orthologs O70361
ZT 8 ZT 16 LD 2.5 SCN Predicted from orthologs O70361
CT 15 CT 3 DD1 2 testis Predicted from orthologs O70361
CT 15 CT 3 DD1 4 liver Predicted from orthologs O70361
ZT 8 ZT 0 LD 14 lumbar vertebra Predicted from orthologs O70361
CT 0 CT 12 DD2 8.8 NIH-3T3 cells Predicted from orthologs O70361
ZT 8 ZT 0 LD 23 liver Predicted from orthologs O70361
ZT 6 ZT 18 LD 4 muscle Predicted from orthologs W5PL09
ZT 12 ZT 0 LD 25 abdominal adipose tissue Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 2.3 basolateral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 12 ZT 0 LD 5 entral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 4.5 hippocampus Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 14 nucleus accumbens core Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 5 nucleus accumbens shell Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 8 prefrontal cortex Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 6 SCN Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 2 ventral tegmental area Predicted from orthologs Q8CJE2
Descriptionperiod circadian clock 3 [Source:Xenbase;Acc:XB-GENE-876840](View all)
Protein Sequence
(Fasta)		 SDQMDRTRSH KELMSMVQEM KRRLPHEKFN RNKPSTVDAL NYALKCVRQV QANSAFFQVL 60
SDSGTCRMDS AVHTIEDLET ITSEHPPKNT DTFVIVFSLT SGKMVYISEQ AAYILNCKKK 120
LLDSSRFVEL LAPQDVSVFY KHTTQSHLLP WNIGAETASL YEYTQVKSFF CRIRGGKDRE 180
HEIRYNPYRM TPYSVKVRSS DNAEPEPCCL ALVEKIHSGY EAPRIPLDKR IFTTTHTPGC 240
VFLEVDDRAA PLLGYLPQDL VGTSVLMYLH PEDRPLMLAM HKKVVLKYAG QPPFEHSPIR 300
FCTQNGDYIT LDTSWSSFVN PWSRKVAFII GRHKVRTGPL NEDVFSAPSR EILSTDKEIK 360
ELQGQIYKVL LQPVHNNGSS GYGSLGSNGS YEHYISIASS SDSNGNCVDE TQKEPMTLKQ 420
VCTDINRIKN IGQQVYIDTR SHSTGKPNTN TFVKPQLENT MEGQTTSTCD TSRKGQHIPS 480
YQQINCVDSI IRYLESYNIP ALKRKCESST NTTSSSSEDD RVPIDTSQLS AESMVTTDAQ 540
TTAAVVGAPL TDLTLSIKAM SVVSVTSQCS YSSTIVHVPQ PESELLVCEV WYEEVTAIED 600
AAGGTPEEFK QIGLTKEVLS AHTQKEEQEY VDRFRQRILQ SPYSSYLQQD SRSKGCSHEQ 660
GMLEKKYCFP HNRKKKQLKD VSTRAPGSHS APIILENPNR HQWPPSIIVN ILLNRLLLLL 720
LKRERNKVNT SVRNPLPPVT GNNAASAIAS ESSPQQSNMS YNLPAFPGFA SPYMGTFMAV 780
LLPNYNMYPQ MNPQIPPPFF PTQFPLSSSY PYAGMSSAPQ SMPSQVPTDF VDPTSRASSP 840
MSADGLEVQS EDPQMFSNSR SSSPLQLVLL QEELPKAMEQ AEGTNEESQV DIKCVSYIFG 900
NSAISCLRGR KACPYSQQSF KAATHSWSLE NASFLLWSNR FYIMELQKRS LLLPVRTGIF 960
LWVKNLLFVS GLLCRDKETL LKEDLEKLTA MRNKQPWFTE EQKEELAEVH SWIRNRTIPQ 1020
EIDTQGCVMC LKSSTKDEKH VQRKDGDPKE DAA 1053
Nucleotide Sequence
(Fasta)		 AGCGACCAAA TGGACAGAAC TCGGTCTCAC AAGGAATTAA TGAGCATGGT GCAGGAAATG 60
AAGAGAAGGC TGCCGCATGA AAAATTTAAT CGTAACAAGC CCAGCACTGT TGATGCCCTG 120
AACTACGCAT TGAAATGCGT TAGACAAGTT CAAGCCAACA GTGCATTTTT CCAGGTCCTC 180
AGTGACAGTG GGACATGTCG AATGGATTCA GCTGTACATA CAATTGAGGA CTTGGAGACA 240
ATAACATCTG AGCACCCACC AAAGAACACA GATACCTTTG TAATAGTATT TTCATTAACC 300
TCTGGGAAAA TGGTGTATAT CTCCGAACAA GCAGCTTACA TCCTGAATTG TAAGAAGAAG 360
CTGCTGGACT CCTCTAGGTT TGTGGAACTC CTGGCCCCTC AGGATGTCAG TGTATTTTAC 420
AAGCACACAA CTCAGTCGCA TCTACTACCT TGGAATATAG GAGCAGAGAC AGCCTCACTA 480
TATGAATACA CTCAAGTGAA ATCATTTTTC TGCAGAATAA GAGGAGGAAA GGATCGGGAA 540
CATGAAATCC GGTATAATCC ATACAGAATG ACCCCCTATT CTGTCAAAGT GCGCAGTTCT 600
GATAATGCTG AGCCAGAGCC ATGCTGCCTT GCCTTGGTAG AAAAAATCCA TTCAGGATAT 660
GAAGCTCCCA GGATACCTTT GGATAAAAGA ATATTTACAA CTACACACAC ACCGGGCTGT 720
GTTTTTCTTG AAGTTGATGA CAGAGCTGCA CCTTTATTGG GATACTTGCC TCAAGATTTA 780
GTTGGAACCT CTGTCCTGAT GTATCTGCAC CCAGAGGACC GTCCTTTAAT GCTAGCAATG 840
CATAAAAAAG TAGTTTTGAA GTATGCTGGA CAGCCTCCAT TTGAGCACTC TCCTATCAGG 900
TTTTGTACTC AAAATGGAGA CTACATAACA TTGGATACTA GCTGGTCAAG CTTTGTCAAT 960
CCGTGGAGCA GAAAGGTGGC ATTTATTATC GGTCGACATA AAGTCAGAAC GGGACCTCTT 1020
AATGAAGATG TTTTTTCTGC ACCAAGCCGA GAAATTCTTA GCACTGATAA AGAGATCAAA 1080
GAATTGCAAG GACAGATATA CAAGGTCCTT TTGCAGCCTG TTCATAATAA TGGATCCAGT 1140
GGTTATGGAA GCTTGGGAAG CAATGGCTCT TATGAACATT ACATCAGCAT AGCATCATCC 1200
AGTGATTCAA ATGGAAACTG TGTGGATGAA ACACAAAAAG AACCGATGAC TTTGAAACAA 1260
GTCTGTACGG ATATTAATCG TATTAAAAAT ATTGGTCAGC AAGTGTATAT TGACACAAGA 1320
AGCCACAGTA CTGGAAAGCC AAATACAAAT ACATTTGTAA AGCCACAGCT AGAAAATACA 1380
ATGGAAGGAC AAACAACATC CACTTGTGAT ACATCAAGGA AGGGGCAACA CATTCCATCA 1440
TACCAGCAAA TCAACTGTGT GGATAGCATA ATTAGGTATC TAGAGAGCTA CAACATCCCA 1500
GCACTGAAGA GAAAATGTGA ATCCTCTACA AACACAACGT CTTCATCTTC TGAAGATGAT 1560
AGAGTGCCAA TTGACACAAG CCAGTTATCC GCCGAATCAA TGGTGACAAC AGATGCTCAG 1620
ACAACAGCAG CCGTGGTTGG AGCTCCTCTG ACAGATTTGA CACTTTCTAT CAAGGCAATG 1680
AGTGTGGTCT CTGTCACCAG TCAATGTAGC TACAGCAGTA CCATTGTTCA TGTTCCACAG 1740
CCTGAGTCAG AATTATTAGT TTGCGAAGTA TGGTACGAAG AAGTCACTGC CATAGAAGAT 1800
GCTGCTGGTG GGACTCCTGA GGAATTTAAG CAGATTGGTT TAACAAAGGA AGTTTTATCC 1860
GCACACACAC AGAAAGAAGA GCAGGAATAT GTCGATAGAT TTCGGCAAAG GATTCTCCAG 1920
TCTCCGTATA GCAGCTACCT CCAGCAAGAC AGCAGAAGTA AAGGCTGTTC TCATGAGCAA 1980
GGTATGCTAG AAAAGAAATA TTGCTTCCCC CACAATCGTA AAAAAAAACA ATTAAAAGAT 2040
GTAAGTACTA GAGCACCAGG ATCCCATAGC GCTCCTATAA TTTTGGAAAA CCCTAACAGG 2100
CACCAGTGGC CTCCATCTAT AATAGTGAAC ATTCTTCTCA ACCGACTACT CCTGCTGCTT 2160
TTAAAAAGGG AAAGAAACAA GGTAAACACA AGCGTCAGAA ACCCATTGCC GCCAGTAACA 2220
GGCAACAATG CAGCTTCTGC CATAGCCTCT GAATCTTCTC CTCAGCAATC AAATATGTCT 2280
TACAATCTAC CTGCTTTTCC AGGATTTGCA TCTCCGTATA TGGGAACATT TATGGCAGTT 2340
TTACTCCCTA ATTACAATAT GTATCCCCAA ATGAATCCAC AGATACCTCC ACCTTTTTTC 2400
CCCACTCAGT TTCCATTATC ATCTTCCTAT CCATATGCTG GAATGTCCAG TGCTCCACAA 2460
AGCATGCCTT CTCAGGTACC CACAGACTTT GTTGACCCAA CATCCCGAGC ATCTTCTCCG 2520
ATGTCAGCAG ATGGGCTAGA AGTTCAAAGT GAAGATCCAC AAATGTTTAG CAATTCAAGA 2580
AGCAGCTCTC CACTTCAGCT TGTTCTTCTT CAGGAAGAGT TACCCAAGGC TATGGAGCAA 2640
GCAGAGGGAA CCAATGAAGA GAGCCAGGTG GATATAAAAT GTGTAAGTTA CATATTTGGT 2700
AATAGCGCTA TCAGTTGCCT GAGAGGTAGG AAAGCTTGCC CTTATTCCCA ACAAAGCTTC 2760
AAAGCTGCCA CTCACTCTTG GTCCCTTGAA AATGCCAGCT TCTTGTTGTG GAGTAATAGG 2820
TTTTATATTA TGGAGCTCCA GAAGAGGAGT TTATTATTGC CTGTGAGAAC TGGTATCTTT 2880
CTTTGGGTCA AAAATTTACT TTTTGTTTCT GGTTTGCTTT GTAGGGATAA AGAAACTTTA 2940
TTGAAAGAGG ACTTGGAAAA GCTGACTGCC ATGCGGAACA AACAGCCTTG GTTCACTGAA 3000
GAGCAGAAGG AAGAACTTGC TGAAGTGCAT TCTTGGATTC GGAATCGAAC AATTCCTCAA 3060
GAAATTGATA CTCAAGGATG TGTCATGTGT TTAAAAAGCT CCACCAAGGA TGAAAAACAC 3120
GTACAGCGGA AAGATGGGGA CCCAAAAGAG GATGCAGCC 3159
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-GaG-020965Gallus gallus48.88 0.00e+00 794.7
CGD-HoS-021431Homo sapiens (Human)49.76 0.00e+00 727.6
CGD-MuM-021078Mus musculus (Mouse)43.15 0.00e+00 755
CGD-OvA-022195Ovis aries51.74 0.00e+00 664.1
CGD-RaN-021797Rattus norvegicus42.63 0.00e+00 745.7
Gene Ontology

GO:0009648--photoperiodism
GO:0032922--circadian regulation of gene expression
GO:0006355--regulation of transcription, DNA-templated
GO:0005515--protein binding