CGDB Gene Information


Tag Content
CGDB ID CGD-GoG-059542
Ensembl Accession ENSGGOP00000028540.1
Protein Name PER3
Ensembl Information ENSGGOG00000000580; ENSGGOT00000034651
Organism Gorilla gorilla
NCBI Taxa ID 9595
Circadian Information
Phase Amplitude
(FOLD)
Tissue/Cell Evidence
Peak Trough External
condition
ZT 15 ZT 9 LD 6 duodenum Predicted from orthologs E1C8E2
ZT 0 ZT 12 LD 5 pineal gland Predicted from orthologs E1C8E2
ZT 8 ZT 0 LD 4.6 brown adipose tissue Predicted from orthologs O70361
ZT 8 ZT 0 LD 2.46 epididymal white adipose tissue Predicted from orthologs O70361
ZT 12 ZT 0 LD 10 femur vertebra Predicted from orthologs O70361
ZT 8 ZT 4 LD 5.2 heart Predicted from orthologs O70361
ZT 12 ZT 0 LD 35 jejunum Predicted from orthologs O70361
CT 9 CT 21 DD1 2 SCN Predicted from orthologs O70361
ZT 8 ZT 16 LD 2.5 SCN Predicted from orthologs O70361
CT 15 CT 3 DD1 2 testis Predicted from orthologs O70361
CT 15 CT 3 DD1 4 liver Predicted from orthologs O70361
ZT 8 ZT 0 LD 14 lumbar vertebra Predicted from orthologs O70361
CT 0 CT 12 DD2 8.8 NIH-3T3 cells Predicted from orthologs O70361
ZT 8 ZT 0 LD 23 liver Predicted from orthologs O70361
ZT 6 ZT 18 LD 4 muscle Predicted from orthologs W5PL09
ZT 12 ZT 0 LD 25 abdominal adipose tissue Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 2.3 basolateral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 12 ZT 0 LD 5 entral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 4.5 hippocampus Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 14 nucleus accumbens core Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 5 nucleus accumbens shell Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 8 prefrontal cortex Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 6 SCN Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 2 ventral tegmental area Predicted from orthologs Q8CJE2
Descriptionperiod circadian clock 3 [Source:HGNC Symbol;Acc:HGNC:8847](View all)
Protein Sequence
(Fasta)
RXFVFGAGVF SAXDEALGEE SGKRWSPEFH LQRKLADSSH SEQQDRNRVS EELIMVVQEM 60
KKYFPSERRN KPSTLDALKY ALRCVHSVQA NSEFFQILSQ NGAPQADVSM YSLEELAAIA 120
SEHTSKNTDT FVAVFSFLSG RLVHISEQAA LILNRKKDVL ASSHFVDLLA PQDVRVFYAH 180
TARAQLPFWN NWTQRAAARY ECAPVKPFFC RIRGGEDRKQ EKCHSPFRII PYLIHVHHPA 240
QPESESEPCC LTVVEKIHSG YEAPRIPVNK RIFTTTHTPG CVFLEVDEKA VPLLGYLPQD 300
LIGTSILSYL HPEDRSLMVA IHQKVLKYAG HPPFEHSPIR FCTQNGDYII LDSSWSSFVN 360
PWSRKVSFII GRHKVRTPPS NSTCLCIVYM NMNLRTVDLP HTQQHIYSLA RDPACIALSK 420
FSQLGICKSH KAICSISISL KKQIPNTSER FSSSQCVYIR NQQIKNKSKK VYVLNYMLGT 480
FNCTSLYSVS GECKTFTSFH QTLKNNSVYT EPCEDWRNDE HSPSYQQINC IDSVIRYLKS 540
YNIPALKRKC ISCTNTTSSS SEEDKQNHKA DDVQALQAPA GLQIPAIPKS EMPTNGRSID 600
TGGGAPQILS TAMLSLGSGI SQCGYSSTIV HVPPPETARD ATLFCEPWTL NMQPAPLTSE 660
EFKHVGLTAA VLSAHTQKEE QNYVDKFREK ILSSPYSSYL QQESRSKAKY SYFQGDSTSK 720
QTRSAGCRKG KHKRKKLPEP PDSSSSNTGS GPRRGAHQNA QPCCPSAASS PHTSSPTFPP 780
AAMVPSQAPC LVPAFPLPAA TSPGREYAAP GTAPEGLHGP PLSEGLQPYP AFPFPYLDTF 840
MTVFLPDPPV CPLLSPSFFP CPFLGATASS AISPSMSSAM SPTLDPPASV TSQRREEEKW 900
EAQSEGPPFI TSRSSSPLQL NLLQEEMPRP SESPDQMRRN TCPQAEYCVT GNNGSESSPA 960
TTGALSTGSP PRENPSHPTA SALSTGSPPM ENPSHPTAST LSMGLPPSGT VLSTGSPPSE 1020
SPSRTGSAAS GSSDSSIYLT SSVYSSKISQ NGQQSQDVQK KETFPNVAEE PIWRMIRQIP 1080
ERILMTYQVP ERVKEVVLKE DLEKLESMRQ QQPQFSHGQK EELAKVYNWI QSQTVTQEID 1140
IQACVTCENE DSADGAATSC GQVLVEDSS 1169
Nucleotide Sequence
(Fasta)
CGGNGGTTTG TTTTTGGTGC TGGCGTTTTC TCTGCTNAGG ACGAGGCCCT GGGTGAAGAA 60
TCGGGGAAGC GGTGGAGCCC CGAGTTCCAT CTGCAGAGGA AATTGGCGGA CAGCAGCCAC 120
AGTGAACAGC AAGATCGAAA CAGAGTTTCT GAAGAACTTA TCATGGTTGT CCAAGAAATG 180
AAAAAATACT TCCCCTCGGA GAGACGCAAT AAACCAAGCA CCCTAGATGC CCTCAAGTAT 240
GCCCTCCGCT GTGTCCACAG CGTGCAAGCA AACAGTGAGT TTTTCCAGAT TCTCAGTCAG 300
AATGGAGCAC CTCAGGCAGA TGTGAGCATG TACAGTCTTG AGGAGCTGGC CGCTATTGCT 360
TCAGAACACA CTTCCAAAAA CACAGATACC TTTGTGGCAG TATTTTCATT TCTGTCTGGA 420
AGGTTAGTGC ACATTTCTGA ACAGGCTGCT TTGATCCTGA ATCGTAAGAA AGATGTCCTG 480
GCGTCCTCTC ACTTTGTTGA CCTGCTTGCA CCTCAAGACG TGAGGGTATT CTACGCGCAC 540
ACTGCCAGAG CTCAGCTTCC TTTCTGGAAC AACTGGACCC AAAGAGCAGC TGCACGGTAT 600
GAATGTGCTC CGGTGAAACC TTTTTTCTGC AGGATCCGTG GAGGTGAAGA CAGAAAGCAA 660
GAGAAGTGTC ACTCCCCATT CCGGATCATC CCCTATCTGA TTCATGTACA TCACCCTGCC 720
CAGCCAGAAT CGGAATCAGA ACCTTGCTGT CTCACTGTGG TTGAAAAGAT TCACTCTGGT 780
TATGAAGCTC CTCGGATCCC AGTGAATAAA AGAATCTTCA CCACCACACA CACCCCAGGG 840
TGTGTTTTTC TTGAAGTAGA TGAAAAAGCA GTGCCTTTGC TGGGTTACCT ACCTCAGGAC 900
CTGATTGGAA CGTCGATCCT AAGCTACCTG CACCCTGAAG ATCGTTCTCT GATGGTTGCC 960
ATACACCAAA AAGTTTTGAA GTATGCAGGG CATCCTCCCT TTGAACATTC TCCCATTCGA 1020
TTTTGTACTC AAAACGGAGA CTACATCATA CTGGATTCCA GTTGGTCCAG CTTTGTGAAT 1080
CCCTGGAGCC GGAAGGTTTC TTTCATCATT GGTCGGCATA AAGTTCGAAC TCCGCCATCA 1140
AATTCCACTT GTTTGTGCAT TGTCTACATG AACATGAACC TGAGAACAGT AGATCTACCA 1200
CATACACAGC AACATATATA TAGTTTAGCA AGGGACCCTG CCTGTATCGC TCTCAGTAAA 1260
TTTTCACAAC TAGGAATATG TAAATCTCAT AAAGCAATCT GTTCTATTTC CATTTCACTC 1320
AAAAAACAAA TTCCAAATAC CTCTGAAAGG TTTTCAAGCT CACAATGTGT TTATATTAGG 1380
AACCAGCAAA TAAAGAATAA AAGTAAGAAA GTATATGTTC TTAATTACAT GCTGGGTACT 1440
TTTAATTGCA CATCCCTTTA TTCTGTTTCA GGTGAATGTA AGACCTTTAC TTCCTTCCAC 1500
CAAACACTGA AAAATAATAG TGTGTACACT GAGCCCTGTG AGGATTGGAG GAACGATGAG 1560
CATAGCCCAT CCTATCAACA GATCAACTGT ATCGACAGTG TCATCAGATA CCTGAAGAGC 1620
TACAACATTC CAGCTTTGAA AAGAAAGTGT ATCTCCTGTA CAAATACAAC TTCTTCCTCC 1680
TCAGAAGAAG ACAAACAGAA CCACAAGGCA GATGATGTCC AAGCCTTACA AGCACCAGCT 1740
GGTTTGCAAA TCCCAGCCAT ACCTAAATCA GAAATGCCAA CAAATGGACG GTCCATAGAC 1800
ACAGGAGGAG GAGCTCCACA GATCCTGTCC ACGGCGATGC TGAGCTTGGG GTCGGGCATA 1860
AGCCAATGCG GTTACAGCAG CACCATTGTC CATGTCCCAC CCCCAGAGAC AGCCAGGGAT 1920
GCCACCCTCT TCTGTGAGCC CTGGACCCTG AACATGCAGC CAGCCCCTTT GACCTCAGAG 1980
GAATTTAAAC ATGTGGGGCT CACAGCGGCT GTTCTGTCAG CGCACACCCA GAAGGAAGAG 2040
CAGAATTATG TTGATAAATT CCGAGAAAAG ATCCTGTCAT CACCCTACAG CTCCTATCTT 2100
CAGCAAGAAA GCAGGAGCAA AGCTAAATAT TCATATTTTC AAGGAGATTC TACTTCCAAG 2160
CAGACGCGGT CGGCCGGCTG CAGGAAAGGG AAGCACAAGC GGAAGAAGCT GCCGGAGCCG 2220
CCAGACAGCA GCAGCTCGAA CACCGGCTCT GGTCCCCGCA GGGGAGCGCA TCAGAACGCA 2280
CAGCCCTGCT GCCCCTCCGC GGCCTCCTCT CCGCACACCT CGAGCCCGAC CTTCCCACCT 2340
GCCGCCATGG TGCCCAGCCA GGCCCCTTGT CTCGTCCCAG CTTTTCCCCT CCCAGCCGCG 2400
ACCTCTCCCG GAAGAGAATA CGCAGCCCCC GGAACTGCAC CGGAAGGCCT GCATGGGCCG 2460
CCCTTGTCCG AGGGCTTGCA GCCTTACCCA GCTTTCCCTT TTCCTTACTT GGATACTTTT 2520
ATGACCGTTT TCCTGCCTGA CCCCCCTGTC TGTCCTCTGT TGTCGCCATC GTTCTTTCCA 2580
TGTCCATTCC TGGGGGCGAC AGCCTCTTCT GCGATATCAC CCTCAATGTC GTCAGCAATG 2640
AGTCCAACCC TGGACCCACC CGCTTCAGTC ACCAGCCAAA GGAGAGAGGA GGAAAAGTGG 2700
GAGGCACAAA GCGAGGGGCC CCCGTTCATT ACTTCGAGAA GCAGCTCACC CTTGCAGTTA 2760
AACTTACTTC AGGAAGAGAT GCCCAGACCC TCTGAATCTC CAGATCAGAT GAGAAGGAAC 2820
ACGTGCCCAC AAGCTGAGTA TTGTGTTACA GGCAACAATG GCAGTGAGAG CAGTCCTGCT 2880
ACTACCGGTG CACTGTCCAC GGGGTCACCT CCCAGGGAGA ATCCATCCCA TCCTACTGCC 2940
AGCGCTCTGT CCACAGGATC ACCTCCCATG GAGAATCCAT CCCATCCTAC TGCCAGCACA 3000
CTGTCCATGG GATTGCCTCC CAGCGGGACT GTTCTGTCCA CGGGGTCACC TCCCAGCGAA 3060
TCTCCATCCA GAACAGGTTC AGCAGCATCA GGAAGCAGCG ACAGCAGTAT ATACCTTACT 3120
AGTAGTGTTT ATTCTTCTAA AATCTCCCAA AATGGGCAGC AATCTCAGGA CGTACAGAAA 3180
AAGGAAACAT TTCCTAATGT CGCCGAAGAG CCCATCTGGA GAATGATACG GCAGATACCT 3240
GAGCGCATTC TCATGACATA CCAGGTACCT GAGAGGGTTA AAGAAGTTGT ACTAAAAGAA 3300
GACCTGGAAA AGCTAGAAAG TATGAGGCAG CAGCAGCCCC AGTTTTCTCA TGGGCAAAAG 3360
GAGGAGCTGG CTAAGGTGTA TAATTGGATT CAAAGCCAGA CTGTCACTCA AGAAATCGAC 3420
ATTCAAGCCT GTGTCACTTG TGAAAATGAA GATTCAGCTG ATGGTGCGGC CACATCCTGT 3480
GGTCAGGTTC TGGTAGAAGA CAGCAGTTGA GTGACTGTGA GGATGAACCT TCATACCCTT 3540
TCCAAGACGT GTTACACAGA CAGACCTTTT TAAGTCCTGG ACTTTTAAAT GACCATGAAG 3600
TTATCATTGA ATGTTAAGAT TTTTTCTTCT TGATTTTTTA ATACACATAA TCTTTTTGAA 3660
GCAGACATTG TATACAGAAT CTTACTTCTC TTTGTTCCTG ATATATTAAA ATGGCCAGTT 3720
AGGCTGTTTT TGTAGTTGAA TTGTCTTCTA AAGAGATTGG ATGGCCTCTA AAGAGGTATG 3780
TGTATCTTTA TTTCAGATGT CACCCAGAGT AAATTAGAAG TATAGCTAGA ATGAGCCCCA 3840
AACCTTAGCC TCGTTTATTT TGTTCTGTTA CATAAGTCAT TTTCCCCTTA GAGTGCTTGA 3900
AGAAATCCCA CCTACAGGTT GTATACTTTT CATAATGGTT TCCATGAATG TAGTAGGTTC 3960
ATACAGGCTT CATTCAACCT GGCATTCCCC TCCATAATTA AGATAAAACA TTCCGGTTTT 4020
CTCACAACAC ATTAGCACAT ACTGTCCATT AGCATATCTG GGATAACCAG GTTTTGGGGG 4080
TTGAGTTTTG GCCTTCATCC TTGTAGATCC CTTTCCTATT GATTTCCCAC CTTCCAGTGA 4140
AATTCTGAAA GTCTTATCTT AAAAATCGAT CTGCTTACCA TGGGCCTATT CTTGTAAGTT 4200
TCAGTTAGCA TTTGCATGTG TAATATTAAA ATGAAAGAGG TTCTTACTCA CCCAGTGCTG 4260
TTGCCCTTTT GAGTATTTTT GTTTTTAAAA TAATGATTGT AAAATGTTTT ACAAGCAATG 4320
TAAAAGCTAG TATCATTCTT ACATACTTCT GTGTTTAAAT TTTCATTCTT ACCGAAACAG 4380
TTAACTCTTT CTTTCCAATC AATTTATGCA AAAGAGGTCA CTCCAGCCCT ACCACAGGTC 4440
TGATTGGCAC TGCCTTTTGT TTGCCCTTGA ACAGGGCAGT GTTGTGGGGA CTGCAAAAGA 4500
GAAAACGTCC AGGAGAGCCC AGTTGTCCTC GCCCACAGGG TCCTGCAGGC TCCATCAGTC 4560
ACCGCTTTCT ATGGCGTTTG TAGTTGTGTC TTTTAAGAAG TGAGTGTGAT TGTTTACTTG 4620
ATAAATCAGC TCACTCTCTG GTGCTCTTTA GAGAAGTCCC TGTTTCCTTC TTAAACTTGG 4680
AATGATACAT GAAATTCACA CCCCTGCAGA TCAGAAAAAA CAAATAGAAG AAAATGAAGG 4740
TTACAGTAAC CTTTTGTCTT TATATAACTT GCAACAAAGT AACTTATTTT TTTTTCCTTT 4800
TTTTGTTTTT GGTTTTTTAT GGTTTTTTAA GGAAAATACT TTTCTCCTTT GAAGTTTTAC 4860
AGCTTTTTGT AAATGCGTCC TGATAATGAT TAGGAAAATC GACCTTTTTA TCCATGATGA 4920
CCATCCTCAT AGCTCAGATT TCCTTTCAAA GTAGTGGCTT TCTGGATGGT AATTCCATCT 4980
TAAGGTGTCA GAACTATTTT CAAATGCTGC CTTTGACAGT TCTTGGAATT TTCTGATATT 5040
AAGCAGTTCC ATGCAAATAT TCGTGTTTTA TAAATAGCTC TCATAGTCTG CTCCATCTTG 5100
ATAGTTAAGT GATCTCTGAA GCGTTTGTGT GTGTGTTGAT CAGGTTGTGT GATATTTTTG 5160
CTTGATAAAG AATCAAATTT GAAACAATTA ACCAGCCAGT AGATTGTCTG TCAGTGACCT 5220
TCTGTAGTAA TAAAGTTTTT GCCACTGTAA ATAAAAACGG TATCCGTAGC TATCAGGATC 5280
ATTGCGCATT CATATATGCT AAGCCTTATG TTCTCTAATA GAAGCCTTTC TTTTCCATTG 5340
TTTCTGGATA TTTGTATTAT CCAAATGTGC TTATTTCTTT GCCTTAGCAC ACGTTTTATG 5400
GAGTACTTGT TATACTAGAT TTGATTTGAA ACTGGTGCTT GTCGCAGAAC TGTCAGAGCA 5460
TGAGGAGCGC TCCTCCTGTG GGTGGACGCG TTCACGCACT CACAGGTTGC ACCTGCTGCT 5520
GGCGGTGAGC AGGGGGCTCA GCAGCTTGAC CGCCGCCCCC CGAGGGGGCT CTCCCCAGCT 5580
TAAACTTTGT TGTTTAAATT TGTTAACTTT TTATATTAAT GACTATTGAA AGTGGTAATA 5640
AAAATTTATA TTATAGGCTT CAGTGTTTAC ATGAATGTTA CCCAAAAAGC TGTGTTTTCT 5700
TTGGTCAGAG GTCAAGATTT ATGAAAAACA AGATGCTGTA TGAATGGAAA TCATTTTGCA 5760
ACTGAGTGAA ACTTCATTGT AATTCACAGT GTAAATTTAA TCCAAACTGA AATTTTGTTT 5820
CAACTGAATT TATAATTAAC TCTGAATTTG TTTTTAATCA TTAGTAATAT TTCAATTGGG 5880
TATCTTTTTA AGTAAAAACA ACAAATAAAC TCTGTACATG TAAAACGTG 5929
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-GaG-020965Gallus gallus40.21 0.00e+00 696
CGD-MuM-021078Mus musculus (Mouse)52.26 0.00e+00 1024.2
CGD-OvA-022195Ovis aries52.2 0.00e+00 1068.1
CGD-RaN-021797Rattus norvegicus53.03 0.00e+00 1045.8
Gene Ontology

GO:0005515--protein binding
GO:0032922--circadian regulation of gene expression
GO:0045187--regulation of circadian sleep/wake cycle, sleep
GO:0000122--negative regulation of transcription from RNA polymerase II promoter
GO:0031625--ubiquitin protein ligase binding
GO:0019900--kinase binding
GO:0007623--circadian rhythm