CGDB Gene Information

Tag Content
CGDB ID CGD-DiO-049550
Ensembl Accession ENSDORP00000014270.1
Protein Name Per3
Ensembl Information ENSDORG00000015158; ENSDORT00000015159
Organism Dipodomys ordii
NCBI Taxa ID 10020
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 15 ZT 9 LD 6 duodenum Predicted from orthologs E1C8E2
ZT 0 ZT 12 LD 5 pineal gland Predicted from orthologs E1C8E2
ZT 8 ZT 0 LD 4.6 brown adipose tissue Predicted from orthologs O70361
ZT 8 ZT 0 LD 2.46 epididymal white adipose tissue Predicted from orthologs O70361
ZT 12 ZT 0 LD 10 femur vertebra Predicted from orthologs O70361
ZT 8 ZT 4 LD 5.2 heart Predicted from orthologs O70361
ZT 12 ZT 0 LD 35 jejunum Predicted from orthologs O70361
CT 9 CT 21 DD1 2 SCN Predicted from orthologs O70361
ZT 8 ZT 16 LD 2.5 SCN Predicted from orthologs O70361
CT 15 CT 3 DD1 2 testis Predicted from orthologs O70361
CT 15 CT 3 DD1 4 liver Predicted from orthologs O70361
ZT 8 ZT 0 LD 14 lumbar vertebra Predicted from orthologs O70361
CT 0 CT 12 DD2 8.8 NIH-3T3 cells Predicted from orthologs O70361
ZT 8 ZT 0 LD 23 liver Predicted from orthologs O70361
ZT 6 ZT 18 LD 4 muscle Predicted from orthologs W5PL09
ZT 12 ZT 0 LD 25 abdominal adipose tissue Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 2.3 basolateral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 12 ZT 0 LD 5 entral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 4.5 hippocampus Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 14 nucleus accumbens core Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 5 nucleus accumbens shell Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 8 prefrontal cortex Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 6 SCN Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 2 ventral tegmental area Predicted from orthologs Q8CJE2
Descriptionperiod circadian clock 3 [Source:MGI Symbol;Acc:MGI:1277134](View all)
Protein Sequence
(Fasta)		 DSFAAVFSFL SGRLVHISEQ AALILNCKKD FLESSHFVDL LAPQDVKVFY THTARAQLPV 60
WNSWTRGAAS QYEYTPVKPF FCRIRGGRDK VQEKHYSPFR ILPYLVHVHS SAQPESEPCC 120
LTLIEKTHSG YEAPRIPVGK RIFTTTHTPG CVFLEVDERA VPLLGYLPQD LIGTSILTYL 180
HPEDRPLMFA MHQKVLKYVG HPPFEHSPVR FRTQNGDYII LDSSWSSFVN PWSRKVSFII 240
GRHKVRTSPL NEDVFATRIK QTNSSDKDIT ELQEQIHKLL LKPVHASASS GYGSLGSSGS 300
QEQLVSITSS SESSGHWAED MPKEPMTLEQ VYANVNEIKN LGQQLYIESK TKSSSVKPGM 360
RMRTELQGGE AXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXYLK 420
SYSIPTLKRK CISCTNTTSS SSEEDRQSHK ADSGQTPQAA AQNTARPTVE MPATGGGAWT 480
MSMAALSVGS AVSPCRSSSI ACALPLHPAE DATMVCEPWA LEARPVPLTA EEMRHVGLTA 540
AVLSAHTQKE EQNYVDSFRE KILASPYSCY LQQESRSKAK YSYVQGASPS KQSRSTWSKK 600
GQHKRQRLPV PLDASSCGPG LCPHAGALLP GVQPWGPPTA ASPSASGLPS PSTLLVPSQA 660
PYLLPVCPLL ALTSVGGAAT AWAAAPGCPL ASSRQAPPAP PPPHVDTRMT IVLPSPAVCS 720
LWPPPSSPYL FLGDPGSPEV PTPIPAPNLE PPTYASNQRR AEEKWETQSG EHLLLGSRSS 780
SPLQLNLLQE EMPASSESAR PAGRGACPEP RRXXXXXXXX XXXXXXXXXX XXXXXXXXXX 840
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 900
XXXXXXXXXX XXXXXXXXXX XXSSGSSMSF ISSDYSLEIS RNGQQSQGVQ EKALPRPAAE 960
SIWRMIEQTP ERVLMTYQMP ERVKDAVLKE DLERLESMRR HQPHFSPGQK EELAKVHSWI 1020
QSQNIPPGVT PSRVACANRS SAEHSRARGL YPGEDIS 1057
Nucleotide Sequence
(Fasta)		 GATTCCTTTG CGGCAGTATT TTCATTTCTC TCTGGAAGGC TGGTGCACAT TTCTGAACAG 60
GCAGCTTTGA TTCTGAACTG TAAGAAAGAT TTCCTGGAAT CCTCTCACTT TGTTGACCTG 120
CTCGCTCCAC AAGACGTGAA GGTGTTCTAC ACGCACACAG CTCGAGCTCA GCTTCCTGTC 180
TGGAACAGCT GGACCCGAGG AGCAGCATCC CAGTATGAAT ATACCCCGGT GAAACCCTTC 240
TTCTGCAGGA TCCGTGGAGG CCGAGACAAA GTGCAAGAGA AGCATTACAG CCCGTTCCGG 300
ATCCTCCCCT ATCTGGTTCA TGTACATAGC TCTGCCCAAC CCGAATCAGA ACCTTGCTGC 360
CTCACACTGA TTGAGAAGAC TCACTCTGGT TATGAAGCTC CTCGAATCCC AGTGGGCAAA 420
AGAATTTTTA CCACAACACA CACTCCAGGC TGTGTGTTCC TTGAAGTAGA TGAAAGAGCA 480
GTGCCTTTGC TAGGTTACCT ACCTCAGGAT CTAATCGGGA CATCCATCTT AACATACTTG 540
CACCCGGAAG ACCGTCCTCT GATGTTTGCC ATGCACCAAA AAGTCTTGAA GTACGTTGGC 600
CATCCTCCCT TTGAACACTC ACCTGTTCGA TTCCGCACTC AGAATGGAGA TTATATCATC 660
CTGGACTCCA GTTGGTCCAG CTTTGTGAAT CCCTGGAGCC GGAAAGTATC TTTCATCATT 720
GGTCGACACA AAGTTCGAAC GAGTCCACTA AATGAGGATG TTTTTGCTAC CAGAATAAAG 780
CAGACAAACA GTAGTGACAA AGACATAACA GAATTACAAG AGCAAATTCA CAAACTTCTC 840
TTGAAGCCAG TTCACGCGAG TGCTTCCAGT GGCTACGGAA GCCTGGGAAG CAGTGGTTCA 900
CAGGAGCAGC TTGTGAGCAT CACGTCGTCC AGCGAGTCCA GTGGGCACTG GGCTGAGGAT 960
ATGCCAAAGG AGCCGATGAC CTTGGAGCAG GTCTATGCCA ATGTAAATGA AATTAAGAAT 1020
CTGGGTCAGC AGCTCTACAT TGAGTCAAAG ACCAAATCGT CGTCAGTCAA GCCAGGGATG 1080
AGGATGCGGA CGGAGCTGCA GGGTGGTGAG GCGGNNNNNN NNNNNNNNNN NNNNNNNNNN 1140
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1200
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN ATACCTGAAG 1260
AGCTACAGCA TCCCCACGCT GAAAAGGAAG TGTATATCCT GTACAAATAC AACCTCTTCA 1320
TCCTCAGAGG AGGACAGACA GAGCCACAAG GCAGACAGCG GCCAGACACC GCAAGCTGCT 1380
GCGCAGAACA CAGCCAGACC AACTGTGGAA ATGCCAGCCA CTGGCGGAGG AGCTTGGACC 1440
ATGTCCATGG CCGCCCTGAG CGTAGGGTCA GCCGTGAGCC CGTGCCGCAG CAGCAGTATT 1500
GCCTGTGCCC TGCCCCTGCA CCCAGCAGAG GATGCCACCA TGGTTTGTGA GCCCTGGGCC 1560
CTGGAAGCGC GGCCTGTTCC GCTGACGGCA GAGGAGATGA GACATGTCGG GCTCACAGCA 1620
GCTGTGCTGT CGGCCCACAC ACAGAAGGAA GAACAGAATT ATGTTGACAG CTTTCGGGAG 1680
AAGATCCTGG CATCGCCCTA TAGCTGCTAT CTTCAGCAAG AAAGTAGAAG CAAAGCAAAA 1740
TACTCCTACG TCCAAGGAGC TTCTCCTTCC AAGCAGAGCA GATCAACTTG GAGCAAGAAA 1800
GGGCAGCACA AACGGCAGAG GCTGCCGGTG CCACTGGATG CCAGCAGCTG CGGCCCTGGC 1860
CTCTGTCCCC ATGCCGGGGC ACTGCTCCCG GGTGTGCAGC CCTGGGGGCC TCCCACAGCC 1920
GCCTCCCCCA GCGCCTCAGG CCTTCCCAGC CCATCTACCC TGCTGGTCCC CAGCCAAGCC 1980
CCTTACCTCC TCCCAGTGTG TCCTCTCCTG GCCTTGACCT CAGTGGGAGG AGCAGCCACA 2040
GCCTGGGCGG CTGCTCCCGG ATGTCCCCTG GCCAGCAGCC GGCAGGCTCC TCCAGCACCC 2100
CCTCCCCCCC ATGTGGATAC TCGGATGACC ATTGTCCTCC CAAGCCCTGC TGTCTGTTCC 2160
TTGTGGCCAC CGCCATCCTC TCCGTATCTG TTCCTGGGGG ACCCAGGCTC CCCTGAAGTG 2220
CCAACCCCGA TACCAGCTCC AAACCTGGAG CCACCTACTT ACGCCAGCAA CCAAAGGAGA 2280
GCAGAGGAAA AGTGGGAGAC ACAGAGTGGA GAGCACCTAC TTCTTGGTTC AAGGAGCAGC 2340
TCCCCCTTAC AGTTAAACCT GCTCCAGGAG GAAATGCCCG CATCCTCCGA GTCTGCACGT 2400
CCAGCGGGAA GGGGCGCCTG CCCGGAGCCC AGACGTNNNN NNNNNNNNNN NNNNNNNNNN 2460
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2520
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2580
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2640
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2700
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2760
NNNNGAAGCA GTGGTAGCAG TATGTCCTTC ATTAGCAGTG ACTATTCCTT GGAAATCTCG 2820
AGAAATGGGC AGCAGTCTCA GGGTGTACAG GAAAAAGCTT TGCCCAGGCC AGCCGCTGAG 2880
TCCATCTGGA GAATGATAGA GCAAACGCCG GAGCGGGTGC TGATGACGTA TCAGATGCCG 2940
GAGAGGGTTA AGGACGCTGT GCTGAAAGAA GATCTGGAGC GGCTGGAAAG CATGAGGCGG 3000
CATCAGCCCC ACTTTTCTCC CGGGCAGAAG GAGGAGCTGG CCAAGGTGCA TTCTTGGATT 3060
CAAAGCCAGA ATATCCCTCC AGGAGTCACC CCAAGCCGTG TTGCCTGTGC AAACAGAAGT 3120
TCAGCTGAGC ACTCTAGAGC CCGTGGGCTG TATCCAGGAG AAGACATCAG CTGA 3174
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-GaG-020965Gallus gallus51.12 3.00e-161 565.8
CGD-MuM-021078Mus musculus (Mouse)58.73 0.00e+00 886.3
CGD-OvA-022195Ovis aries52.88 0.00e+00 784.6
CGD-RaN-021797Rattus norvegicus57.35 0.00e+00 860.1
Gene Ontology

GO:0005515--protein binding
GO:0045187--regulation of circadian sleep/wake cycle, sleep
GO:0000122--negative regulation of transcription from RNA polymerase II promoter
GO:0031625--ubiquitin protein ligase binding
GO:0019900--kinase binding
GO:0007623--circadian rhythm