CGDB Gene Information


Tag Content
CGDB ID CGD-MuM-021066
Uniprot Accession O54943; O54943; PER2_MOUSE; O54954
Protein Name Period circadian protein homolog 2
Gene Name Per2
Genbank Protein ID NP_035196.2
Genbank Nucleotide ID NM_011066.3
EMBL (Genbank) ID AAC39942.1
Organism Mus musculus (Mouse)
NCBI Taxa ID 10090
Circadian Information
Evidence Phase Amplitude
(FOLD)
Sentence Tissue/Cell Data type PMID
Peak Trough External
condition
High-throughput CT 11 CT 23 DD1 1.21 The circadian clock modulates renal function and identifies the 20-HETE synthesis pathway as one of its principal renal targets. kidney Microarray [1]
High-throughput ZT 13 ZT 1 LD 7.29 Peripheral circadian desynchrony marks an early event in the metabolic disruption associated with chronic shiftwork. liver Microarray [1]
High-throughput ZT 10 ZT 22 LD 3.86 Mice are most sensitive to UVB-induced DNA damage in the epidermis at night. telogen epidermis Microarray [1]
High-throughput CT 21 CT 9 DD2 1.32 Sleep or learning and memory disturbances observed in patients with intellectual disability are probably not related to the circadian clock in the hippocampus. hippocampus Microarray [1]
Small-scale CT 9 CT 21 DD1 6.00 The mRNA level of per2 is under circadian control in SCN of mouse. SCN Small-scale [1]
Small-scale ZT 18 ZT 6 LD 1.89 The mRNA level of Per2 is under circadian control in brain of mouse. brain Small-scale [1]
Small-scale ZT 16 ZT 0 LD 25.00 Negative regulators for the BMAL-CLOCK heterodimer (such as Per1, Per2, Per3, Cry1 and Cry2) had a similar expression pattern, i.e. a peak at early/mid-dark phase (Per1, Per3 and Cry2 at 19:00, or Per2 and Cry1 at 23:00) in jejunum of mice. jejunum Small-scale [1]
Small-scale CT 0 CT 12 DD2 10.00 Lithium significantly increased the expression of Per2 and prolonged the period of Per2 in NIH-3T3 cells. NIH-3T3 cells Small-scale [1]
Small-scale ZT 13 ZT 2 LD 10.00 As measured by one-way ANOVA, Per2 and Bmal1 were rhythmic in both WT mice and VIP-deficient mice. heart Small-scale [1]
Small-scale CT 18 CT 6 DD2 10.00 Rescue of MLL1 fully restored cyclic gene expression of both Dbp and Per2 genes. MEFs Small-scale [1]
Small-scale CT 12 CT 20 DD3 5.00 Per2 mRNA levels in the RPE-choroid show a clear circadian rhythm in vivo. A circadian rhythm in PER2::LUC bioluminescence was recorded from cultured RPE-choroid explants. Light exposure during the subjective night did not cause a circadian rhythm phase-shift of PER2::LUC bioluminescence. Finally, removal of the suprachiasmatic nuclei of the hypothalamus did not affect the bioluminescence circadian rhythm in the RPE-choroid retina Small-scale [1]
Small-scale CT 12 CT 20 DD3 6.00 Per2 mRNA levels in the RPE-choroid show a clear circadian rhythm in vivo. A circadian rhythm in PER2::LUC bioluminescence was recorded from cultured RPE-choroid explants. Light exposure during the subjective night did not cause a circadian rhythm phase-shift of PER2::LUC bioluminescence. Finally, removal of the suprachiasmatic nuclei of the hypothalamus did not affect the bioluminescence circadian rhythm in the RPE-choroid retinal pigment epithelium (RPE) Small-scale [1]
Small-scale ZT 0 ZT 16 LD 2.00 Per2 mRNA levels in the RPE-choroid show a clear circadian rhythm in vivo. A circadian rhythm in PER2::LUC bioluminescence was recorded from cultured RPE-choroid explants. Light exposure during the subjective night did not cause a circadian rhythm phase-shift of PER2::LUC bioluminescence. Finally, removal of the suprachiasmatic nuclei of the hypothalamus did not affect the bioluminescence circadian rhythm in the RPE-choroid retinal pigment epithelium (RPE) Small-scale [1]
Small-scale ZT 12 ZT 16 LD 5.00 Per2 mRNA levels in the RPE-choroid show a clear circadian rhythm in vivo. A circadian rhythm in PER2::LUC bioluminescence was recorded from cultured RPE-choroid explants. Light exposure during the subjective night did not cause a circadian rhythm phase-shift of PER2::LUC bioluminescence. Finally, removal of the suprachiasmatic nuclei of the hypothalamus did not affect the bioluminescence circadian rhythm in the RPE-choroid retina Small-scale [1]
Small-scale ZT 12 ZT 4 LD 5.00 The expression of Per2 is cyclic in liver of C57/Black6 mice. pituitary gland Small-scale [1]
Small-scale CT 12 CT 0 DD3 4.79 Per2 transcripts displayed a 4.79±0.21 fold change in ovary of mice. ovary Small-scale [1]
Small-scale ZT 13 ZT 5 LD 2.40 The clock gene Per2 is required for normal platelet formation and function of mouse. bone marrow Small-scale [1]
Small-scale ZT 17 ZT 1 LD 6.00 The clock gene Per2 is required for normal platelet formation and function of mouse. megakaryocytes Small-scale [1]
Small-scale CT 8 CT 16 DD1 20.00 The anesthesia induces the increase of NAD+, and consequently leads to the repression of mPer2 expression and modifies the circadian expression pattern and diurnal behavioral rhythm of mice. Furthermore, the modification of mPer2 expression by the anesthesia is considered to affect various gene expressions. SCN Small-scale [1]
Small-scale ZT 12 ZT 4 LD 2.00 The rhythmic effects of Iso on Ptgs2 expression were mediated by an interplay between clock genes Per2 and Bmal1 in osteoblasts. bone Small-scale [1]
Small-scale ZT 16 ZT 4 LD 7.00 Per2 shows circadian rhythm in mouse liver. liver Small-scale [1]
Small-scale ZT 18 ZT 6 LD 3.00 Rhythmicity of well-known circadian genes (Dbp, Per1, Per2) gradually emerged with age after eye-opening and was fully established by adulthood (P70-p90) primary visual cortex (V1) Small-scale [1]
Small-scale CT 14 CT 2 DD3 12.00 Basal and inducible PER levels are decreased in the EIF4ES209A/S209A mouse. suprachiasmatic nucleus (SCN) Small-scale [1]
Small-scale ZT 19 ZT 7 LD 2.50 Circadian rhythms of Per2 clock gene expression in the amygdala. amygdala Small-scale [1]
Small-scale ZT 13 ZT 1 LD 2.50 Circadian rhythms of Per2 gene expression in the hippocampus. hippocampus Small-scale [1]
Small-scale ZT 15 ZT 23 LD 3.00 Rhythmic RNA expressions of the core clock genes Per1, Per2, Bmal1, Dbp, and Rev-erbα were also phase-advanced in these tissues as well as in the adrenal gland, indicating a systemic entrainment of circadian clocks to the stressful stimuli. cortex Small-scale [1]
Small-scale ZT 15 ZT 23 LD 6.00 Rhythmic RNA expressions of the core clock genes Per1, Per2, Bmal1, Dbp, and Rev-erbα were also phase-advanced in these tissues as well as in the adrenal gland, indicating a systemic entrainment of circadian clocks to the stressful stimuli. kidney Small-scale [1]
Small-scale CT 6 CT 18 DD1 4.00 Both mPer1 and mPer2 RNAs exhibited prominent circadian rhythms in SCN. SCN Small-scale [1]
Small-scale CT 9 CT 3 DD1 3.00 Both mPer1 and mPer2 RNAs exhibited prominent circadian rhythms in whole eyes. eye Small-scale [1]
Small-scale CT 15 CT 3 DD1 4.00 The phase of the circadian oscillations in mPer RNA levels in the three peripheral tissues (liver, skeletal muscle and testis) was more similar to that in retina than in the SCN. liver Small-scale [1]
Small-scale CT 15 CT 3 DD1 3.00 The phase of the circadian oscillations in mPer RNA levels in the three peripheral tissues (liver, skeletal muscle and testis) was more similar to that in retina than in the SCN. skeletal muscle Small-scale [1]
DescriptionTranscriptional repressor which forms a core component of the circadian clock. The circadian clock, an internal time-keeping system, regulates various physiological processes through the generation of approximately 24 hour circadian rhythms in gene expression, which are translated into rhythms in metabolism and behavior. It is derived from the Latin roots ''circa'' (about) and ''diem'' (day) and acts as an important regulator of a wide array of physiological functions including metabolism, sleep, body temperature, blood pressure, endocrine, immune, cardiovascular, and renal function. Consists of two major components: the central clock, residing in the suprachiasmatic nucleus (SCN) of the brain, and the peripheral clocks that are present in nearly every tissue and organ system. Both the central and peripheral clocks can be reset by environmental cues, also known as Zeitgebers (German for ''timegivers''). The predominant Zeitgeber for the central clock is light, which is sensed by retina(View all)
PTM Sites
Count: 56
(View all)
PositionPeptideTypePMID
10 GYVDFSPSPTSPTKE phosphorylation 16983144; 16381945; 23193290; 470004; 22135298; 470005; 470006; 470007; 470008; 22817900
1126 MIPDTEESEQFIKYV phosphorylation 16097765; 16381945; 23193290
12 VDFSPSPTSPTKEPG phosphorylation 16983144; 16381945; 23193290; 470004; 22135298; 470005; 470006; 470007; 470008; 22817900
1231 PYEEDSPSPGLCDTS phosphorylation 16983144; 16381945; 23193290; 470026; 22135298; 470064; 470065; 22817900
1237 PSPGLCDTSEAKEEE phosphorylation 16097765; 16381945; 23193290; 470026; 22135298; 470064; 470065; 22817900
1238 SPGLCDTSEAKEEEG phosphorylation 16097765; 16381945; 23193290; 470026; 22135298; 470064; 470065; 22817900
13 DFSPSPTSPTKEPGA phosphorylation 16983144; 16381945; 23193290; 470004; 22135298; 470005; 470006; 470007; 470008; 22817900
15 SPSPTSPTKEPGAPQ phosphorylation 16983144; 16381945; 23193290; 470004; 22135298; 470005; 470006; 470007; 470008; 22817900
523 KTSGKIQTKSHVSHE phosphorylation 16983144; 16381945; 23193290; 470009; 22135298; 470010; 470011; 22817900
525 SGKIQTKSHVSHESG phosphorylation 16097765; 16381945; 23193290; 16983144; 470009; 22135298; 470010; 470011; 470012; 22817900
528 IQTKSHVSHESGGQK phosphorylation 16097765; 16381945; 23193290; 16983144; 470009; 22135298; 470010; 470011; 470012; 22817900
53 TGRDSQGSDCDDNGK phosphorylation 19491384; 16381945; 23193290; 9439800; 22135298; 22817900
531 KSHVSHESGGQKEAS phosphorylation 16097765; 16381945; 23193290; 16983144; 470010; 22135298; 470011; 470012; 470013; 22817900
538 SGGQKEASVAEMQSS phosphorylation 16097765; 16381945; 23193290; 16983144; 470012; 22135298; 470013; 470014; 470015; 22817900
544 ASVAEMQSSPPAQVK phosphorylation 16097765; 16381945; 23193290; 16983144; 470013; 22135298; 470014; 470015; 22817900
545 SVAEMQSSPPAQVKA phosphorylation 16097765; 16983144; 16381945; 23193290; 470013; 22135298; 470014; 470015; 22817900; 25338131
554 PAQVKAVTTIERDSS phosphorylation 16097765; 16381945; 23193290; 470047; 22135298; 22817900
618 EFPANIPSRKATVSP phosphorylation 16097765; 16381945; 23193290; 470048; 22135298; 470049; 470016; 22817900
622 NIPSRKATVSPGLHS phosphorylation 16097765; 16381945; 23193290; 470048; 22135298; 470049; 470016; 22817900
624 PSRKATVSPGLHSGE phosphorylation 16097765; 16983144; 16381945; 23193290; 470048; 22135298; 470049; 470016; 22817900; 25338131
659 TLPGKAESVVSLTSQ phosphorylation 16983144; 16381945; 23193290; 449331; 22135298; 470017; 22817900
662 GKAESVVSLTSQCSY phosphorylation 16983144; 16381945; 23193290; 449331; 22135298; 470017; 22817900
69 LRMLVESSNTHPSPD phosphorylation 16097765; 16381945; 23193290; 470042; 22135298; 470043; 468401; 22817900
693 ETVEDMASGPESLDG phosphorylation 17242355; 16381945; 23193290; 16097765; 16983144; 21183079; 19060867; 468399; 22135298; 468400; 19366988; 22817900; 25338131
697 DMASGPESLDGAAGG phosphorylation 17242355; 16381945; 23193290; 16097765; 16983144; 21183079; 19060867; 468399; 22135298; 468400; 19366988; 22817900; 25338131
706 DGAAGGLSQEKGPLQ phosphorylation 16097765; 16381945; 23193290
71 MLVESSNTHPSPDDA phosphorylation 16097765; 16381945; 23193290; 470042; 22135298; 470043; 468401; 22817900
74 ESSNTHPSPDDAFRL phosphorylation 16983144; 17242355; 16381945; 23193290; 19060867; 470042; 22135298; 470043; 468401; 19366988; 22817900; 25338131
758 QNYLQERSRAQASDR phosphorylation 16097765; 16381945; 23193290; 470050; 22135298; 470018; 22817900
763 ERSRAQASDRGLRNT phosphorylation 16097765; 16381945; 23193290; 16983144; 470050; 22135298; 470018; 470051; 22817900
770 SDRGLRNTSGLESSW phosphorylation 16097765; 16381945; 23193290; 470018; 22135298; 470019; 470051; 22817900
775 RNTSGLESSWKKTGK phosphorylation 25338131
776 NTSGLESSWKKTGKN phosphorylation 16097765; 16983144; 16381945; 23193290; 470051; 22135298; 470019; 22817900; 25338131
793 LKSKRVKTRDSSEST phosphorylation 16097765; 16381945; 23193290; 470052; 22135298; 470053; 470066; 470054; 470055; 22817900
796 KRVKTRDSSESTGSG phosphorylation 16097765; 16381945; 23193290; 470052; 22135298; 470053; 470066; 470054; 470055; 470056; 22817900
797 RVKTRDSSESTGSGG phosphorylation 16097765; 16381945; 23193290; 470052; 22135298; 470053; 470066; 470054; 470055; 470056; 22817900
799 KTRDSSESTGSGGPV phosphorylation 16097765; 16381945; 23193290; 470052; 22135298; 470053; 470066; 470054; 470055; 470056; 22817900
8 MNGYVDFSPSPTSPT phosphorylation 16983144; 16381945; 23193290; 470004; 22135298; 470005; 470006; 470007; 470008; 22817900
800 TRDSSESTGSGGPVS phosphorylation 16097765; 16381945; 23193290; 470052; 22135298; 470053; 470066; 470054; 470055; 470056; 470057; 22817900
802 DSSESTGSGGPVSHR phosphorylation 16097765; 16381945; 23193290; 470053; 22135298; 470066; 470054; 470055; 470056; 470057; 22817900
807 TGSGGPVSHRPPLMG phosphorylation 16097765; 16381945; 23193290; 470055; 22135298; 470056; 470057; 22817900
84 DAFRLMMTEAEHNPS phosphorylation 16097765; 16381945; 23193290; 470044; 22135298; 470045; 22817900
858 GIVSTPGTVVAPPAA phosphorylation 16097765; 16381945; 23193290; 470058; 22135298; 22817900
866 VVAPPAATHTGFTMP phosphorylation 16097765; 16381945; 23193290; 470059; 22135298; 470060; 22817900
868 APPAATHTGFTMPVV phosphorylation 16097765; 16381945; 23193290; 470059; 22135298; 470060; 22817900
91 TEAEHNPSTSGCSSE phosphorylation 16097765; 16381945; 23193290; 470044; 22135298; 470045; 470046; 22817900
92 EAEHNPSTSGCSSEQ phosphorylation 16097765; 16381945; 23193290; 470045; 22135298; 470046; 22817900
933 PAHPTLASEITPASQ phosphorylation 16097765; 16381945; 23193290; 470061; 22135298; 470062; 22817900
939 ASEITPASQAEFPSR phosphorylation 16097765; 16381945; 23193290; 470061; 22135298; 470062; 22817900
959 QPCACPVTPPAGTVA phosphorylation 16983144; 16381945; 23193290; 470020; 22135298; 470063; 22817900
964 PVTPPAGTVALGRAS phosphorylation 16097765; 16381945; 23193290; 470020; 22135298; 470063; 470021; 22817900
971 TVALGRASPPLFQSR phosphorylation 16097765; 16381945; 23193290; 16983144; 470063; 22135298; 470021; 22817900; 23567750
980 PLFQSRGSSPLQLNL phosphorylation 16097765; 16983144; 16381945; 23193290; 470022; 22135298; 470023; 22817900
981 LFQSRGSSPLQLNLL phosphorylation 16097765; 16983144; 16381945; 23193290; 470022; 22135298; 470023; 22817900
997 LEEAPEGSTGAAGTL phosphorylation 16097765; 16983144; 16381945; 23193290; 470024; 22135298; 470025; 22817900
998 EEAPEGSTGAAGTLG phosphorylation 16097765; 16983144; 16381945; 23193290; 470024; 22135298; 470025; 22817900
Protein Sequence
(Fasta)
MNGYVDFSPS PTSPTKEPGA PQPTQAVLQE DVDMSSGSSG NENCSTGRDS QGSDCDDNGK 60
ELRMLVESSN THPSPDDAFR LMMTEAEHNP STSGCSSEQS AKADAHKELI RTLKELKVHL 120
PADKKAKGKA STLATLKYAL RSVKQVKANE EYYQLLMSSE SQPCSVDVPS YSMEQVEGIT 180
SEYIVKNADM FAVAVSLVSG KILYISNQVA SIFHCKKDAF SDAKFVEFLA PHDVSVFHSY 240
TTPYKLPPWS VCSGLDSFTQ ECMEEKSFFC RVSVGKHHEN EIRYQPFRMT PYLVKVQEQQ 300
GAESQLCCLL LAERVHSGYE APRIPPEKRI FTTTHTPNCL FQAVDERAVP LLGYLPQDLI 360
ETPVLVQLHP SDRPLMLAIH KKILQAGGQP FDYSPIRFRT RNGEYITLDT SWSSFINPWS 420
RKISFIIGRH KVRVGPLNED VFAAPPCPEE KTPHPSVQEL TEQIHRLLMQ PVPHSGSSGY 480
GSLGSNGSHE HLMSQTSSSD SNGQEESHRR RSGIFKTSGK IQTKSHVSHE SGGQKEASVA 540
EMQSSPPAQV KAVTTIERDS SGASLPKASF PEELAYKNQP PCSYQQISCL DSVIRYLESC 600
SEAATLKRKC EFPANIPSRK ATVSPGLHSG EAARPSKVTS HTEVSAHLSS LTLPGKAESV 660
VSLTSQCSYS STIVHVGDKK PQPELETVED MASGPESLDG AAGGLSQEKG PLQKLGLTKE 720
VLAAHTQKEE QGFLQRFREV SRLSALQAHC QNYLQERSRA QASDRGLRNT SGLESSWKKT 780
GKNRKLKSKR VKTRDSSEST GSGGPVSHRP PLMGLNATAW SPSDTSQSSC PSAPFPTAVP 840
AYPLPVFQAP GIVSTPGTVV APPAATHTGF TMPVVPMGTQ PEFAVQPLPF AAPLAPVMAF 900
MLPSYPFPPA TPNLPQAFLP SQPHFPAHPT LASEITPASQ AEFPSRTSTL RQPCACPVTP 960
PAGTVALGRA SPPLFQSRGS SPLQLNLLQL EEAPEGSTGA AGTLGTTGTA ASGLDCTSGT 1020
SRDRQPKAPP TCNEPSDTQN SDAISTSSDL LNLLLGEDLC SATGSALSRS GASATSDSLG 1080
SSSLGFGTSQ SGAGSSDTSH TSKYFGSIDS SENNHKAKMI PDTEESEQFI KYVLQDPIWL 1140
LMANTDDSIM MTYQLPSRDL QAVLKEDQEK LKLLQRSQPR FTEGQRRELR EVHPWVHTGG 1200
LPTAIDVTGC VYCESEEKGN ICLPYEEDSP SPGLCDTSEA KEEEGEQLTG PRIEAQT 1257
Nucleotide Sequence
(Fasta)
ATGAATGGAT ACGTGGACTT CTCCCCAAGT CCCACCAGTC CCACCAAGGA GCCAGGGGCA 60
CCTCAGCCCA CCCAGGCTGT GCTCCAGGAA GACGTGGACA TGAGCAGTGG CTCCAGCGGA 120
AACGAGAACT GCTCCACGGG ACGGGACTCT CAGGGCAGTG ACTGCGACGA CAATGGGAAG 180
GAGCTGCGGA TGCTCGTGGA ATCTTCCAAC ACTCACCCCA GCCCTGATGA TGCCTTCAGA 240
CTCATGATGA CAGAGGCAGA GCACAACCCC TCCACGAGCG GCTGCAGTAG TGAGCAGTCT 300
GCCAAAGCTG ACGCACACAA AGAACTGATA AGGACCCTGA AGGAGCTGAA GGTCCACCTC 360
CCTGCAGACA AGAAGGCCAA GGGGAAGGCC AGCACGCTGG CAACCCTGAA GTATGCCCTG 420
CGGAGCGTGA AGCAGGTGAA GGCTAATGAG GAGTACTACC AGCTGCTAAT GTCCAGTGAG 480
AGCCAGCCCT GCAGTGTGGA TGTGCCTTCC TACAGCATGG AGCAGGTTGA GGGCATTACC 540
TCCGAGTATA TCGTGAAGAA CGCGGATATG TTTGCTGTGG CTGTGTCCCT GGTTTCTGGG 600
AAGATCCTGT ACATCTCTAA CCAAGTGGCC TCCATCTTTC ACTGTAAGAA GGACGCCTTC 660
AGTGATGCCA AGTTTGTGGA GTTCCTGGCT CCTCATGACG TCAGTGTGTT CCACAGCTAC 720
ACCACCCCTT ACAAGCTTCC GCCCTGGAGT GTGTGCAGCG GCTTAGATTC TTTCACTCAG 780
GAGTGCATGG AGGAGAAATC TTTTTTCTGC CGTGTCAGTG TTGGGAAACA CCACGAGAAT 840
GAGATTCGCT ACCAGCCCTT CCGCATGACA CCCTACCTGG TCAAGGTGCA AGAGCAGCAG 900
GGTGCTGAGA GCCAGCTCTG CTGCCTGCTG CTGGCAGAGA GGGTACACTC GGGCTATGAA 960
GCGCCTAGAA TCCCTCCTGA GAAGAGGATC TTCACAACAA CCCACACACC AAACTGCTTG 1020
TTCCAGGCTG TGGATGAAAG GGCGGTCCCC CTCCTGGGCT ATCTACCTCA GGATCTGATC 1080
GAGACGCCTG TGCTCGTGCA GCTCCACCCC AGCGACCGGC CCTTGATGCT CGCCATCCAC 1140
AAGAAGATCC TACAGGCCGG TGGACAGCCT TTCGATTATT CTCCCATTCG ATTCCGCACC 1200
CGCAACGGGG AGTACATCAC ACTGGACACT AGCTGGTCCA GCTTCATCAA CCCGTGGAGC 1260
AGGAAGATAT CTTTCATCAT TGGGAGGCAC AAAGTCAGGG TAGGCCCTTT GAATGAGGAT 1320
GTGTTCGCAG CTCCCCCGTG CCCAGAGGAG AAGACTCCGC ACCCCAGCGT TCAGGAGCTC 1380
ACAGAACAAA TCCACCGGCT ACTGATGCAG CCTGTCCCCC ACAGCGGCTC CAGTGGCTAT 1440
GGGAGCCTGG GCAGTAACGG ATCCCACGAA CACCTCATGA GCCAGACATC ATCCAGCGAC 1500
AGCAATGGCC AAGAGGAGTC TCACCGGAGG AGATCCGGAA TTTTTAAAAC CAGTGGCAAG 1560
ATTCAAACCA AAAGTCACGT TTCTCATGAG TCTGGAGGAC AGAAGGAAGC ATCTGTTGCA 1620
GAAATGCAAA GCAGCCCCCC AGCTCAGGTG AAAGCTGTCA CCACCATAGA AAGGGACAGC 1680
TCAGGGGCCA GCCTACCCAA GGCCAGCTTC CCAGAGGAAC TAGCCTATAA GAACCAGCCT 1740
CCTTGCTCCT ACCAGCAGAT CAGCTGCCTG GACAGTGTCA TCAGGTACCT GGAGAGCTGC 1800
AGCGAGGCAG CCACCCTGAA AAGGAAGTGC GAGTTCCCAG CCAACATCCC ATCCCGGAAG 1860
GCCACAGTCA GCCCCGGGCT GCACTCTGGA GAGGCAGCGC GGCCCTCCAA GGTGACCAGC 1920
CACACAGAGG TCAGTGCTCA CCTGAGCTCC CTGACGCTGC CAGGCAAGGC CGAGAGTGTG 1980
GTGTCCCTCA CCAGCCAGTG CAGCTACAGC AGCACCATCG TGCATGTGGG CGACAAAAAG 2040
CCACAGCCCG AGCTAGAGAC GGTAGAAGAT ATGGCCAGTG GGCCCGAGTC CCTGGATGGT 2100
GCGGCCGGCG GCCTCAGCCA AGAAAAGGGG CCTCTTCAGA AGTTGGGCCT CACCAAGGAA 2160
GTTCTGGCTG CACATACACA GAAAGAGGAG CAGGGCTTCC TGCAGAGGTT CAGGGAGGTG 2220
AGCAGGCTCA GTGCCCTGCA GGCTCACTGC CAGAACTATC TCCAGGAGCG GTCCCGAGCC 2280
CAGGCGAGTG ATCGAGGACT AAGAAATACT TCTGGACTAG AGTCATCTTG GAAAAAAACT 2340
GGAAAGAACA GGAAACTGAA GTCAAAACGC GTCAAGACTC GGGACTCTTC TGAGAGCACA 2400
GGGTCTGGAG GACCAGTGTC CCACCGACCT CCCCTCATGG GCCTGAATGC CACAGCCTGG 2460
TCACCCTCCG ACACATCCCA GTCCAGCTGC CCCTCTGCAC CCTTCCCCAC CGCAGTGCCA 2520
GCTTACCCCC TACCTGTGTT CCAGGCACCC GGAATAGTAT CCACACCAGG GACGGTGGTG 2580
GCGCCACCTG CAGCCACCCA CACTGGCTTC ACCATGCCTG TTGTGCCTAT GGGCACCCAG 2640
CCTGAATTCG CAGTGCAGCC CCTGCCATTC GCTGCCCCTT TGGCTCCTGT CATGGCCTTC 2700
ATGCTGCCCA GCTACCCGTT CCCACCAGCA ACCCCAAACC TGCCTCAGGC CTTCCTCCCC 2760
AGCCAGCCTC ACTTTCCAGC CCACCCCACA CTTGCCTCCG AAATAACTCC TGCCTCCCAG 2820
GCTGAGTTCC CTAGTCGGAC CTCGACGCTC AGACAGCCGT GCGCTTGCCC AGTCACCCCT 2880
CCAGCCGGCA CAGTGGCCCT GGGCAGAGCC TCCCCACCGC TCTTCCAGTC CAGAGGCAGT 2940
AGTCCCCTAC AACTTAACCT GCTTCAGCTA GAGGAGGCGC CTGAAGGCAG CACTGGAGCC 3000
GCAGGGACCC TGGGGACCAC AGGGACAGCA GCTTCTGGTC TGGACTGCAC ATCTGGCACA 3060
TCTCGGGATC GGCAGCCAAA GGCACCTCCA ACATGCAACG AGCCCTCAGA CACTCAGAAC 3120
AGTGATGCCA TCTCCACGTC AAGTGACCTG CTCAACCTCC TTCTGGGCGA GGACCTCTGC 3180
TCGGCCACTG GCTCAGCCCT GTCTAGAAGC GGGGCATCCG CCACCTCAGA CTCTCTGGGC 3240
TCCAGCTCGC TGGGCTTCGG CACATCCCAA AGTGGGGCAG GCAGTAGTGA CACAAGTCAC 3300
ACCAGCAAAT ACTTTGGAAG CATTGACTCT TCAGAGAATA ATCACAAAGC AAAAATGATC 3360
CCAGACACGG AGGAAAGCGA GCAGTTCATT AAGTACGTCT TGCAGGACCC CATCTGGCTG 3420
CTGATGGCCA ACACAGACGA CAGCATCATG ATGACATACC AGCTGCCCTC CCGGGATCTC 3480
CAGGCGGTGT TGAAGGAGGA CCAGGAGAAG CTGAAGCTGC TGCAGAGGTC CCAGCCCCGG 3540
TTCACAGAGG GCCAGAGGCG AGAGCTCCGA GAGGTTCATC CGTGGGTCCA CACTGGGGGC 3600
CTGCCTACGG CCATCGATGT GACAGGCTGT GTTTACTGCG AGAGTGAGGA GAAAGGCAAC 3660
ATTTGCCTGC CATATGAGGA AGACAGTCCT TCCCCGGGAC TCTGTGATAC CTCAGAAGCC 3720
AAAGAGGAGG AAGGTGAACA GCTGACAGGC CCCAGGATAG AGGCCCAGAC GTAA 3774
Sequence Source Uniprot/ENA
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-AiM-035243Ailuropoda melanoleuca63.84 0.00e+00 1565.8
CGD-AnP-031610Anas platyrhynchos51 0.00e+00 1160.2
CGD-AnC-071415Anolis carolinensis50.67 0.00e+00 1114.8
CGD-AsM-058639Astyanax mexicanus43.73 0.00e+00 864.8
CGD-BoT-071185Bos taurus75.29 0.00e+00 774.2
CGD-CaJ-071069Callithrix jacchus69.02 0.00e+00 1704.9
CGD-CaF-038893Canis familiaris63.52 0.00e+00 1557.7
CGD-CaP-043134Cavia porcellus68.46 0.00e+00 1631.3
CGD-ChS-062246Chlorocebus sabaeus67.82 0.00e+00 1659.8
CGD-ChH-042958Choloepus hoffmanni57.6 1.90e-83 308.1
CGD-DaR-045081Danio rerio49.49 0.00e+00 766.5
CGD-DaN-045719Dasypus novemcinctus65.17 0.00e+00 1045.8
CGD-DiO-057828Dipodomys ordii69.69 0.00e+00 1684.5
CGD-EcT-065583Echinops telfairi47.11 0.00e+00 666
CGD-EqC-040235Equus caballus68.7 0.00e+00 1594.3
CGD-FeC-047752Felis catus61.71 0.00e+00 1497.3
CGD-FiA-064838Ficedula albicollis49.39 0.00e+00 1145.2
CGD-GaM-045447Gadus morhua53.48 0.00e+00 697.2
CGD-GaG-021834Gallus gallus50.5 0.00e+00 1145.6
CGD-GaA-048428Gasterosteus aculeatus42.69 0.00e+00 861.3
CGD-GoG-030217Gorilla gorilla67.5 0.00e+00 1649.8
CGD-HoS-021036Homo sapiens (Human)67.61 0.00e+00 1649.8
CGD-IcT-068082Ictidomys tridecemlineatus69.15 0.00e+00 1703
CGD-LaC-051209Latimeria chalumnae44.81 0.00e+00 964.9
CGD-LeO-053401Lepisosteus oculatus44.77 0.00e+00 902.5
CGD-LoA-040113Loxodonta africana61.88 0.00e+00 1517.7
CGD-MaM-036246Macaca mulatta66.33 0.00e+00 1613.2
CGD-MaE-047600Macropus eugenii55.84 3.00e-141 501.1
CGD-MeG-052536Meleagris gallopavo49.84 0.00e+00 1078.2
CGD-MiM-038285Microcebus murinus71.39 0.00e+00 1142.5
CGD-MuP-066925Mustela putorius furo65.05 0.00e+00 1580.5
CGD-MyL-037266Myotis lucifugus65.55 0.00e+00 1618.2
CGD-NoL-067961Nomascus leucogenys67.37 0.00e+00 1639.4
CGD-OrN-036893Oreochromis niloticus52.14 0.00e+00 760.4
CGD-OrA-038635Ornithorhynchus anatinus53.48 0.00e+00 1301.2
CGD-OrC-065009Oryctolagus cuniculus61.58 0.00e+00 1391.7
CGD-OrL-045650Oryzias latipes44.63 0.00e+00 900.6
CGD-OtG-040337Otolemur garnettii65.83 0.00e+00 1624.8
CGD-PaT-055402Pan troglodytes64.31 0.00e+00 1232.6
CGD-PaA-028191Papio anubis67.74 0.00e+00 1659
CGD-PeS-059572Pelodiscus sinensis49.21 0.00e+00 1103.6
CGD-PoF-055598Poecilia formosa40.38 0.00e+00 849.4
CGD-PoA-066943Pongo abelii67.16 0.00e+00 1605.9
CGD-PrC-038136Procavia capensis53.3 0.00e+00 1226.1
CGD-PtV-055162Pteropus vampyrus65.5 0.00e+00 960.3
CGD-RaN-022186Rattus norvegicus85.2 0.00e+00 2124.4
CGD-SaH-062356Sarcophilus harrisii53.17 0.00e+00 1246.5
CGD-SuS-044235Sus scrofa55.09 0.00e+00 969.1
CGD-TaG-066410Taeniopygia guttata49.5 0.00e+00 1139.4
CGD-TaR-049995Takifugu rubripes45.21 0.00e+00 943.3
CGD-TeN-067451Tetraodon nigroviridis44.81 0.00e+00 939.1
CGD-TuB-057033Tupaia belangeri75.39 1.00e-164 578.6
CGD-TuT-034633Tursiops truncatus59.19 0.00e+00 1429.8
CGD-XiM-041539Xiphophorus maculatus52.03 0.00e+00 764.2
Keyword

KW-0002--3D-structure
KW-0007--Acetylation
KW-0090--Biological rhythms
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0832--Ubl conjugation

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0005634--C:nucleus
GO:0048471--C:perinuclear region of cytoplasm
GO:0001047--F:core promoter binding
GO:0042826--F:histone deacetylase binding
GO:1990226--F:histone methyltransferase binding
GO:0019900--F:kinase binding
GO:0035257--F:nuclear hormone receptor binding
GO:0036002--F:pre-mRNA binding
GO:0070063--F:RNA polymerase binding
GO:0003713--F:transcription coactivator activity
GO:0001222--F:transcription corepressor binding
GO:0008134--F:transcription factor binding
GO:0000976--F:transcription regulatory region sequence-specific DNA binding
GO:0043130--F:ubiquitin binding
GO:0032922--P:circadian regulation of gene expression
GO:0097167--P:circadian regulation of translation
GO:0007623--P:circadian rhythm
GO:0006631--P:fatty acid metabolic process
GO:0006094--P:gluconeogenesis
GO:0005978--P:glycogen biosynthetic process
GO:0070932--P:histone H3 deacetylation
GO:0019249--P:lactate biosynthetic process
GO:0042754--P:negative regulation of circadian rhythm
GO:0060567--P:negative regulation of DNA-templated transcription, termination
GO:0070345--P:negative regulation of fat cell proliferation
GO:0031397--P:negative regulation of protein ubiquitination
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:2000678--P:negative regulation of transcription regulatory region DNA binding
GO:0045892--P:negative regulation of transcription, DNA-templated
GO:0051726--P:regulation of cell cycle
GO:0042752--P:regulation of circadian rhythm
GO:0051946--P:regulation of glutamate uptake involved in transmission of nerve impulse
GO:0050796--P:regulation of insulin secretion
GO:0050767--P:regulation of neurogenesis
GO:0019229--P:regulation of vasoconstriction
GO:0002931--P:response to ischemia
GO:0006351--P:transcription, DNA-templated
GO:0050872--P:white fat cell differentiation

Interpro

IPR000014--PAS
IPR013655--PAS_fold_3
IPR022728--Period_circadian-like_C

PROSITE

PS50112--PAS

Pfam

PF08447--PAS_3
PF12114--Period_C

SMART

SM00091--PAS