CGDB Gene Information

Tag Content
CGDB ID CGD-DaR-045081
Ensembl Accession ENSDARP00000124374.1
Protein Name per2
Ensembl Information ENSDARG00000034503; ENSDART00000148788
Organism Danio rerio
NCBI Taxa ID 7955
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 6 ZT 18 LD 5 skeletal muscle Predicted from orthologs F6ZZH0
ZT 21 ZT 9 LD 6 duodenum Predicted from orthologs Q8QGQ8
ZT 2 ZT 18 LD 3.17 embryos Predicted from orthologs Q8QGQ8
ZT 6 ZT 18 LD 8 embryos Predicted from orthologs Q8QGQ8
CT 12 CT 0 DD1 3 granulosa cells Predicted from orthologs Q8QGQ8
ZT 3 ZT 18 LD 84.29 pineal glands Predicted from orthologs Q8QGQ8
ZT 23 ZT 11 LD 2.25 spleen Predicted from orthologs Q8QGQ8
CT 4 CT 12 DD2 27 aortic smooth muscle cells Predicted from orthologs O15055
ZT 4 ZT 21 LD 5 human HaCaT keratinocytes Predicted from orthologs O15055
ZT 1 ZT 19 LD 2.67 human hair follicle cells Predicted from orthologs O15055
CT 12 CT 0 LL1 3.43 oral mucosa Predicted from orthologs O15055
CT 3 CT 15 DD2 5 U2OS cells Predicted from orthologs O15055
CT 6 CT 18 DD1 4 SCN Predicted from orthologs O54943
CT 9 CT 3 DD1 3 eye Predicted from orthologs O54943
ZT 19 ZT 7 LD 2.5 amygdala Predicted from orthologs O54943
ZT 12 ZT 4 LD 2 bone Predicted from orthologs O54943
ZT 13 ZT 5 LD 2.4 bone marrow Predicted from orthologs O54943
ZT 18 ZT 6 LD 1.89 brain Predicted from orthologs O54943
ZT 15 ZT 23 LD 3 cortex Predicted from orthologs O54943
ZT 13 ZT 2 LD 10 heart Predicted from orthologs O54943
ZT 13 ZT 1 LD 2.5 hippocampus Predicted from orthologs O54943
ZT 16 ZT 0 LD 25 jejunum Predicted from orthologs O54943
ZT 15 ZT 23 LD 6 kidney Predicted from orthologs O54943
CT 15 CT 3 DD1 4 liver Predicted from orthologs O54943
ZT 16 ZT 4 LD 7 liver Predicted from orthologs O54943
CT 18 CT 6 DD2 10 MEFs Predicted from orthologs O54943
ZT 17 ZT 1 LD 6 megakaryocytes Predicted from orthologs O54943
ZT 18 ZT 6 LD 3 n primary visualcortex (V1) Predicted from orthologs O54943
CT 0 CT 12 DD2 10 NIH-3T3 cells Predicted from orthologs O54943
CT 12 CT 0 DD3 4.79 ovary Predicted from orthologs O54943
ZT 12 ZT 4 LD 5 pituitary gland Predicted from orthologs O54943
CT 12 CT 20 DD3 5 retina Predicted from orthologs O54943
ZT 12 ZT 16 LD 5 retina Predicted from orthologs O54943
CT 12 CT 20 DD3 6 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
ZT 0 ZT 16 LD 2 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
CT 9 CT 21 DD1 6 SCN Predicted from orthologs O54943
CT 8 CT 16 DD1 20 SCN Predicted from orthologs O54943
CT 15 CT 3 DD1 3 skeletal muscle Predicted from orthologs O54943
CT 14 CT 2 DD3 12 suprachiasmatic nucleus (SCN) Predicted from orthologs O54943
ZT 16 ZT 4 LD 9 abdominal adipose tissue Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 anterior cingulate Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 2.05 area postrema Predicted from orthologs Q9Z301
ZT 18 ZT 2 LD 6.38 AV3V Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 14 basolateral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 10 ZT 6 LD 2 caudal ventrolateral medulla Predicted from orthologs Q9Z301
CT 12 CT 8 DD17 4.35 colon Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 3.29 dorsal vagal motor nucleus Predicted from orthologs Q9Z301
ZT 2 ZT 14 LD 1.8 dorsomedial nucleus Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 5.5 entral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 5.7 heart Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 15 hippocampus Predicted from orthologs Q9Z301
ZT 16 ZT 3 LD 57 intestinal jejunal mucosa Predicted from orthologs Q9Z301
CT 16 CT 4 DD17 5 liver Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 8.5 liver Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q9Z301
ZT 0 ZT 12 LD 7 nucleus accumbens shell Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.07 nucleus ambiguus Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.63 paraventricular nucleus Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 4 prefrontal cortex Predicted from orthologs Q9Z301
ZT 12 ZT 8 LD 2.5 PVN Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 rostral agranular insula Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 3.92 SCN Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
Descriptionperiod circadian clock 2 [Source:ZFIN;Acc:ZDB-GENE-011220-2](View all)
Protein Sequence
(Fasta)		 MSKDLDSKPY LFSSLEGQDG AIGCSSMATL HRMASFAEGT ELGLASEGSD SSQDRPTSGH 60
NTRKMSHSLH EDVEMKSSSG SSGSGTESHG NESHGNESHG NESHGNESSG SSNSRSKDSA 120
LLVSSGSNKS SNSHSPSPPS STNAFSLLSA SSEQDNPSTS GCSSEESAKA KTQKELIKTL 180
KELKLHLPAE KRNKGSKSTT LNTLKYALRC VRQVEANEEY YQLLMINDSQ PSGLDVSSYT 240
IEEIDSITSE YTLKNTDIFA VAVSLITGKI VYISDQAASI LNCKRDVFKN AKFVEFLTPQ 300
DVSVFYSFTT PYRLPSWSMC TGADSSPSDC MQEKSFFCRI SGGKECEADL QYYPFRMTPY 360
LMKVQDMEHS EDQFCCLLLA ERVHSGYEAP RIPTDKRIFT TTHTPSCVFQ DVDERAVPLL 420
GYLPQDLIGT PVLLHLHPND RPTMLGIHRK ILQCAGQPFD HSIRFCARNG EYITIDTSWS 480
SFVNPWSRKV SFVIGRHKVR MGPVNEDVFA APATAEGKCV DSDIQDITEQ IHRLLLQPVH 540
NNGSSGYGSL GSNDHLLSVA SSSESNGNGT RQRHEEEDIR KAKPRSFQEI CKGVHMQKNQ 600
ELQSKKSPTK FVQKSPVVRP KDSAYPVNWR ESQEEQRAAV QEELAFKDQT VYSYQQISCL 660
DSVIRYLESC NVPITVKRKC QSSSNTTSSN SDEDKQRNAD SSMQVSEEPA HLKEQSGLST 720
LEVSKKPPGS GVVSPSLTPL ALPSKPESVV SITSQCSYSS TIVHVGDKKE IIEDVPSAEG 780
TDVQGLAVPP AAVSPQNQER EAYKKLGLTK QVLAAHTQKE EQAFLSRFRE LRGVHAFKAD 840
CSLYLERQKG QVTSEAVPAA RSCKAGGGGA QETTTTRRGR NKKTKSKRVK PNESSDSTPS 900
GRRPAHRPQL QGLNQTSWSP SDTSQSTFPI AYPAVMPAYP LQMYPGAGGM QPRVDPPMPG 960
FGESQCAPDP RIPMQPIQTP YSAPLVTPMV ALVLPNYMFP QVGSAPRQAF YPPKQGPFPT 1020
QPTFQTQPGF TPQASFPPQS TFTIQTQFTS QNPFSSQPTF QPQPFPFACP EDPPKAPEPE 1080
LREEQSRSPT PQSMGGGGPP SPPLFQSRCS SPLQLNLLQL EETQRSADRQ ENTAPSAVPL 1140
NNCSTGVEKA GSVTAQSKPV KDVVQDEGSP VDGQHSDALS SSSDLLDILP EDSRSGTGSA 1200
TSGSMGSGSN RCGTSASGGS ASRTESSNKS NNSSNYFGSV DSSQKSHKAK GQGSGVLALD 1260
GSENLIKYVL QDPLWLLMAN VDEDVMMSYQ LPSRDIQKVL WEDREKLRQM QKSQPRFTDE 1320
QKRELADVHP WMRRGGLPKA IDIKACMGCE ELSEALNEDD PPDLHMGEAE NSDVTAAPNS 1380
QELQEPPNSP THSCPGPDT 1399
Nucleotide Sequence
(Fasta)		 GAGAGCAGTC AACGGCGAAG TGTGTCAAAC TGAAGCTGTG ACTGGACTGG ATTTTCAAGG 60
AATATTATTT TATTTATTTG GACTTTTACA CTGAGACCTG TTTTGAAGCA AGCCTCCTAT 120
GCGAAAAAGA AGATTTGCTG AAGTTGTCAG AAATCCGAGT GTCCGTCTGC ATTCTCTCAG 180
TGGACCCACC ATGAGGATGG GGTGATTTGT TCGTGTTTTA CTTCACAACA TTAAACCCAA 240
GTCCGATGTC TAAAGACCTG GATTCCAAAC CGTACTTGTT CTCCTCCTTG GAGGGGCAGG 300
ACGGAGCAAT CGGCTGCAGC TCAATGGCGA CGCTTCATCG TATGGCCAGT TTCGCAGAAG 360
GCACTGAACT GGGCCTGGCA TCTGAAGGCA GCGACAGCAG CCAGGACCGT CCAACCTCGG 420
GCCACAACAC CCGGAAGATG AGTCATTCCC TACATGAGGA TGTGGAGATG AAGAGTAGCA 480
GCGGGTCCAG CGGGAGCGGA ACAGAGTCTC ATGGCAATGA GTCTCATGGT AATGAATCCC 540
ACGGAAATGA ATCTCATGGC AATGAGTCTT CTGGGAGTTC CAATAGCCGA AGCAAGGACT 600
CAGCACTACT GGTGTCATCG GGAAGCAACA AGAGCTCCAA CTCTCACAGT CCATCTCCAC 660
CCAGCAGCAC AAATGCTTTC AGTCTTCTGA GCGCCAGTTC AGAACAGGAC AATCCGTCCA 720
CCAGCGGCTG CAGTAGTGAA GAATCTGCAA AAGCCAAGAC GCAGAAAGAG TTGATCAAAA 780
CTCTGAAAGA GCTGAAGCTT CATCTGCCTG CAGAGAAGAG AAACAAAGGC AGCAAATCCA 840
CCACACTCAA CACTCTTAAA TACGCCCTGC GCTGCGTCAG ACAGGTGGAG GCAAATGAAG 900
AGTATTATCA GCTGCTCATG ATTAATGACA GTCAGCCATC AGGGCTTGAT GTCTCATCAT 960
ATACTATAGA GGAGATCGAC AGCATAACCT CTGAATACAC CCTCAAAAAC ACTGATATCT 1020
TCGCAGTGGC CGTGTCTCTC ATCACTGGGA AGATCGTCTA TATTTCAGAC CAGGCCGCCT 1080
CCATCCTCAA CTGCAAGCGG GACGTCTTCA AGAATGCCAA GTTTGTGGAG TTTCTTACAC 1140
CACAGGACGT CAGTGTGTTC TACAGCTTCA CCACACCATA CAGGCTGCCC TCATGGAGCA 1200
TGTGCACTGG CGCAGACTCG TCCCCGTCAG ACTGCATGCA GGAGAAATCC TTCTTCTGTC 1260
GTATTAGCGG CGGTAAGGAG TGTGAGGCAG ATCTGCAGTA TTATCCCTTC AGAATGACTC 1320
CGTATCTGAT GAAGGTTCAG GATATGGAGC ATTCAGAGGA TCAGTTCTGC TGCCTCCTGC 1380
TGGCCGAGAG AGTGCACTCC GGCTACGAAG CTCCCAGAAT CCCCACAGAC AAGCGAATCT 1440
TCACCACCAC ACACACTCCC AGCTGTGTGT TTCAGGATGT GGATGAGCGG GCTGTTCCGT 1500
TACTAGGATA TTTACCACAG GATTTAATCG GCACACCTGT CCTTCTCCAT CTGCATCCGA 1560
ATGATCGGCC AACCATGCTC GGCATCCACA GGAAGATCCT GCAGTGCGCC GGTCAGCCTT 1620
TTGACCATTC GATCCGCTTT TGTGCTCGTA ACGGAGAGTA CATCACCATC GACACCAGCT 1680
GGTCCAGCTT CGTCAATCCC TGGAGCCGCA AAGTTTCCTT CGTCATCGGC AGACATAAAG 1740
TTCGCATGGG TCCGGTGAAT GAAGACGTGT TTGCAGCTCC GGCTACTGCT GAAGGCAAAT 1800
GCGTGGATTC TGACATCCAG GACATCACCG AGCAGATCCA CAGACTCCTG CTGCAGCCGG 1860
TGCACAATAA TGGTTCAAGT GGCTATGGCA GTCTGGGCAG TAATGATCAC CTGCTGAGTG 1920
TGGCGTCATC CAGTGAAAGC AATGGTAACG GGACACGACA GAGACATGAA GAAGAGGACA 1980
TCAGGAAAGC CAAACCGAGG AGCTTTCAGG AGATCTGCAA AGGCGTTCAC ATGCAGAAAA 2040
ACCAGGAGCT GCAGTCCAAG AAAAGCCCTA CTAAGTTTGT TCAGAAAAGT CCAGTGGTTC 2100
GACCGAAAGA CTCTGCATAT CCAGTGAACT GGAGAGAGTC TCAGGAGGAG CAGCGAGCGG 2160
CGGTGCAGGA GGAGCTGGCC TTCAAAGACC AGACTGTCTA CTCCTATCAG CAGATCAGCT 2220
GCCTGGACAG CGTCATCCGC TATCTGGAGA GCTGTAACGT GCCCATTACA GTGAAGAGAA 2280
AGTGCCAATC CTCCTCCAAC ACCACGTCCT CAAACTCAGA CGAGGACAAG CAGAGGAACG 2340
CTGACAGCTC CATGCAAGTC TCTGAAGAGC CGGCTCATCT GAAGGAGCAG TCAGGTCTGT 2400
CAACATTAGA GGTGTCGAAA AAGCCTCCAG GCTCAGGTGT AGTGAGTCCG TCTCTGACTC 2460
CTCTGGCTCT GCCCAGTAAG CCTGAAAGCG TGGTCTCCAT CACCAGCCAG TGCAGCTACA 2520
GCAGCACCAT TGTACACGTG GGAGACAAGA AAGAGATCAT TGAAGATGTT CCCAGCGCTG 2580
AAGGCACAGA TGTTCAAGGT CTCGCCGTCC CTCCGGCCGC AGTTTCGCCT CAGAATCAGG 2640
AGCGAGAGGC GTATAAGAAA CTGGGTTTGA CCAAGCAGGT TCTGGCGGCT CACACGCAGA 2700
AGGAGGAGCA GGCGTTTCTC AGCCGCTTCA GAGAGCTGAG AGGGGTCCAC GCTTTTAAAG 2760
CAGACTGCTC CCTCTATCTG GAGAGGCAGA AAGGACAGGT CACGTCTGAA GCAGTCCCTG 2820
CTGCTCGCTC ATGCAAGGCT GGAGGTGGCG GCGCACAGGA GACCACCACA ACCCGCAGGG 2880
GGCGCAACAA AAAGACCAAA TCCAAGCGAG TAAAGCCGAA TGAGTCGTCA GACAGCACTC 2940
CATCAGGCCG TAGACCTGCA CACAGACCTC AGCTCCAGGG CCTTAACCAG ACGTCCTGGT 3000
CTCCCTCAGA CACGTCCCAA TCCACATTCC CTATCGCCTA TCCTGCCGTG ATGCCTGCGT 3060
ATCCGCTACA GATGTACCCA GGAGCTGGTG GTATGCAGCC CAGAGTGGAC CCTCCAATGC 3120
CAGGCTTTGG GGAAAGTCAA TGCGCACCAG ATCCACGCAT CCCAATGCAG CCCATCCAGA 3180
CGCCATATTC TGCTCCACTA GTCACGCCGA TGGTGGCGCT GGTGCTGCCT AACTACATGT 3240
TTCCACAGGT GGGCAGCGCT CCACGCCAGG CTTTCTACCC CCCAAAACAG GGACCATTCC 3300
CCACCCAGCC CACCTTTCAG ACTCAGCCTG GTTTCACACC GCAGGCTTCA TTTCCCCCGC 3360
AGTCGACGTT TACAATACAA ACACAGTTCA CCTCCCAAAA CCCCTTCAGC TCACAGCCTA 3420
CATTCCAGCC TCAGCCATTT CCATTCGCAT GTCCTGAAGA CCCACCCAAA GCACCTGAGC 3480
CGGAGCTGAG GGAGGAGCAA TCCCGAAGCC CCACCCCTCA GTCAATGGGT GGAGGCGGAC 3540
CTCCATCTCC ACCTCTGTTC CAGTCACGGT GCAGCTCGCC CCTACAACTC AACCTGCTCC 3600
AGCTGGAGGA AACGCAGCGC TCGGCTGACA GACAGGAGAA CACAGCGCCA TCTGCTGTAC 3660
CACTGAACAA CTGCAGTACA GGGGTGGAGA AAGCGGGCAG CGTGACTGCT CAAAGCAAAC 3720
CTGTTAAGGA TGTGGTGCAG GATGAAGGAT CACCTGTGGA TGGTCAACAC AGCGATGCGC 3780
TCTCTTCATC AAGTGACCTG CTGGACATCC TGCCGGAGGA CTCGCGCTCG GGCACCGGCT 3840
CTGCCACATC TGGCTCCATG GGTTCAGGAT CAAACCGCTG TGGGACGTCT GCCAGCGGAG 3900
GATCTGCCAG CAGAACTGAA AGCAGCAACA AGAGCAACAA CAGCAGTAAC TACTTTGGCA 3960
GTGTGGATTC CTCCCAGAAA TCCCACAAGG CCAAGGGTCA GGGCTCTGGT GTGCTGGCTC 4020
TGGACGGCAG TGAGAATCTG ATCAAGTATG TCCTGCAGGA CCCGCTCTGG CTGCTCATGG 4080
CCAACGTGGA CGAAGATGTA ATGATGTCAT ACCAGTTGCC TTCTCGAGAC ATCCAGAAGG 4140
TGCTGTGGGA GGACCGAGAG AAGCTGCGTC AGATGCAGAA GAGTCAGCCG CGCTTCACAG 4200
ACGAGCAGAA GAGAGAGCTG GCCGACGTGC ATCCCTGGAT GAGGAGAGGA GGACTGCCTA 4260
AAGCCATCGA CATCAAGGCG TGCATGGGCT GTGAGGAGCT CAGTGAAGCT CTGAATGAAG 4320
ACGATCCTCC AGATCTGCAC ATGGGAGAAG CAGAAAACAG CGACGTCACT GCTGCTCCAA 4380
ACTCACAAGA ACTTCAAGAA CCTCCAAACT CGCCAACGCA CAGCTGTCCC GGTCCAGACA 4440
CCTGAACTGA AGCTCAGCCA TGAGGGACCT TCAGCACCAC AGACCTCCAG GAAGACTCTC 4500
GCTCGCTCCG CTCCTGTACA GAGACAGTGT AAGTACTGCA GTGAGAGAGA GAGAGAGCGA 4560
TCGGGTGTCT CCAAAGCCAG ACTCTGTGCT GTTCGATGAC CATTACTGTT AGAGTGAGCG 4620
GATCACTTTC CTCTTCAGTG TTTCTCCTGT TGTCCTGTAC ATGTACAGAC TAACTTATTT 4680
CCTTCTTGAC AGAACTTTGT TTTGTACTAT TTTGTATAAA TGTGTGCTGT TTTCTCCTCT 4740
GAAAAGCACT CATAATGGAT CTGCTGGTGT TTGCTAGTTG TGTTGTTGAA TAGGTTTCTG 4800
AATTCCTTTC GCATTCACAA TTCTTCGCTG AGGACTTGTG AGTTATTTAT TGAATTAGGG 4860
CAGTGGAATT GTGTCCTAAC ACAACATCTG ATCTCTTCGC TTGAGCAGTT GTAGCTCATT 4920
TAAGATGTTT AGTGAATGCA TTAGGTGAAT TGATCTGAAA AGTGTTTCAG ATGAGAGTTC 4980
TGGTGCTATG TTCTCGATCA GGCCGGCTGC CTGATCATCT GTTGCGATAT TGAACCTCAG 5040
TGTTAGAGTT CTCTTTTATA AAGCGAGGTG TAAGTGATGG TGGTTTAACT GATCTCACAG 5100
ACTGTCCATG TGTCAACCTG CTGTGAAGCC ACAGTTACCA ATAAACAGCC GAAACAGAGA 5160
GGCACCTTAT TCGGGAGATT ACAATATGCC ATTGGAGGGT CTCCATTTGA ATAGTACTTC 5220
AAATACCAGT GGTGAGGTCA ATTTGATATG AAGCTTTAAA GGTTTAGAAA TCTATTTTAC 5280
AACGTTTAGC ACACGTTTAA AAGAAATATG CTTGCATTCT GTCACTTTGG AAGCTGTGCA 5340
GCCATCTGTG ATGTGTCTTA CGCTGCCTGT TTGTTTAATA AAGTGAATTT AAAATAAAAT 5400
CTATTTTTTA GAAATGTA 5418
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-EqC-020992Equus caballus50.89 0.00e+00 799.7
CGD-GaG-021834Gallus gallus47.47 0.00e+00 1026.2
CGD-HoS-021036Homo sapiens (Human)51.46 0.00e+00 808.5
CGD-MuM-021066Mus musculus (Mouse)49.49 0.00e+00 766.5
CGD-RaN-022186Rattus norvegicus49.67 0.00e+00 767.3
Gene Ontology

GO:0043153--entrainment of circadian clock by photoperiod
GO:0009648--photoperiodism
GO:0016525--negative regulation of angiogenesis
GO:0042753--positive regulation of circadian rhythm
GO:0009416--response to light stimulus
GO:0045475--locomotor rhythm
GO:0042542--response to hydrogen peroxide
GO:0009411--response to UV
GO:0003682--chromatin binding