CGDB Gene Information


Tag Content
CGDB ID CGD-TeN-067451
Ensembl Accession ENSTNIP00000017339.1
Protein Name PER2 (1 of many)
Ensembl Information ENSTNIG00000014323; ENSTNIT00000017557
Organism Tetraodon nigroviridis
NCBI Taxa ID 99883
Circadian Information
Phase Amplitude
(FOLD)
Tissue/Cell Evidence
Peak Trough External
condition
ZT 6 ZT 18 LD 5 skeletal muscle Predicted from orthologs F6ZZH0
ZT 21 ZT 9 LD 6 duodenum Predicted from orthologs Q8QGQ8
ZT 2 ZT 18 LD 3.17 embryos Predicted from orthologs Q8QGQ8
ZT 6 ZT 18 LD 8 embryos Predicted from orthologs Q8QGQ8
CT 12 CT 0 DD1 3 granulosa cells Predicted from orthologs Q8QGQ8
ZT 3 ZT 18 LD 84.29 pineal glands Predicted from orthologs Q8QGQ8
ZT 23 ZT 11 LD 2.25 spleen Predicted from orthologs Q8QGQ8
CT 4 CT 12 DD2 27 aortic smooth muscle cells Predicted from orthologs O15055
ZT 4 ZT 21 LD 5 human HaCaT keratinocytes Predicted from orthologs O15055
ZT 1 ZT 19 LD 2.67 human hair follicle cells Predicted from orthologs O15055
CT 12 CT 0 LL1 3.43 oral mucosa Predicted from orthologs O15055
CT 3 CT 15 DD2 5 U2OS cells Predicted from orthologs O15055
CT 6 CT 18 DD1 4 SCN Predicted from orthologs O54943
CT 9 CT 3 DD1 3 eye Predicted from orthologs O54943
ZT 19 ZT 7 LD 2.5 amygdala Predicted from orthologs O54943
ZT 12 ZT 4 LD 2 bone Predicted from orthologs O54943
ZT 13 ZT 5 LD 2.4 bone marrow Predicted from orthologs O54943
ZT 18 ZT 6 LD 1.89 brain Predicted from orthologs O54943
ZT 15 ZT 23 LD 3 cortex Predicted from orthologs O54943
ZT 13 ZT 2 LD 10 heart Predicted from orthologs O54943
ZT 13 ZT 1 LD 2.5 hippocampus Predicted from orthologs O54943
ZT 16 ZT 0 LD 25 jejunum Predicted from orthologs O54943
ZT 15 ZT 23 LD 6 kidney Predicted from orthologs O54943
CT 15 CT 3 DD1 4 liver Predicted from orthologs O54943
ZT 16 ZT 4 LD 7 liver Predicted from orthologs O54943
CT 18 CT 6 DD2 10 MEFs Predicted from orthologs O54943
ZT 17 ZT 1 LD 6 megakaryocytes Predicted from orthologs O54943
ZT 18 ZT 6 LD 3 n primary visualcortex (V1) Predicted from orthologs O54943
CT 0 CT 12 DD2 10 NIH-3T3 cells Predicted from orthologs O54943
CT 12 CT 0 DD3 4.79 ovary Predicted from orthologs O54943
ZT 12 ZT 4 LD 5 pituitary gland Predicted from orthologs O54943
CT 12 CT 20 DD3 5 retina Predicted from orthologs O54943
ZT 12 ZT 16 LD 5 retina Predicted from orthologs O54943
CT 12 CT 20 DD3 6 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
ZT 0 ZT 16 LD 2 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
CT 9 CT 21 DD1 6 SCN Predicted from orthologs O54943
CT 8 CT 16 DD1 20 SCN Predicted from orthologs O54943
CT 15 CT 3 DD1 3 skeletal muscle Predicted from orthologs O54943
CT 14 CT 2 DD3 12 suprachiasmatic nucleus (SCN) Predicted from orthologs O54943
ZT 16 ZT 4 LD 9 abdominal adipose tissue Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 anterior cingulate Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 2.05 area postrema Predicted from orthologs Q9Z301
ZT 18 ZT 2 LD 6.38 AV3V Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 14 basolateral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 10 ZT 6 LD 2 caudal ventrolateral medulla Predicted from orthologs Q9Z301
CT 12 CT 8 DD17 4.35 colon Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 3.29 dorsal vagal motor nucleus Predicted from orthologs Q9Z301
ZT 2 ZT 14 LD 1.8 dorsomedial nucleus Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 5.5 entral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 5.7 heart Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 15 hippocampus Predicted from orthologs Q9Z301
ZT 16 ZT 3 LD 57 intestinal jejunal mucosa Predicted from orthologs Q9Z301
CT 16 CT 4 DD17 5 liver Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 8.5 liver Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q9Z301
ZT 0 ZT 12 LD 7 nucleus accumbens shell Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.07 nucleus ambiguus Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.63 paraventricular nucleus Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 4 prefrontal cortex Predicted from orthologs Q9Z301
ZT 12 ZT 8 LD 2.5 PVN Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 rostral agranular insula Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 3.92 SCN Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
Descriptionperiod circadian clock 2 [Source:HGNC Symbol;Acc:HGNC:8846](View all)
Protein Sequence
(Fasta)
MSEDRDSKKF LYSTVENKEH VPRSPISQLH LMASTYSEGC GGRDGVELEP ELGLASEGSD 60
SSHEHAASHD NRKRTRPPLH EDVEMGGSGS SGSGIESPSN DSHGRESHGN ESVGSSNGNG 120
KDSALLESSG SNKSSNSHSP SPPSSSNAFS LVSSEQDHPS TSGCSSEQSA KAKTQKELFK 180
TLKELKMHLP SEKRSKGKSS TINTLKYALR CVKQVKANEE YYQMLMINDS QPPGFDVSSY 240
TIEEINSITS EYTLKNTDIF AVAVSLITGK IVYISDQAAS ILNCKREVFN NAKFVEFLTP 300
QDVSVFYSFT TPYRLPSWSM CTGAESSPTE CMQEKSFFCR ISGGKEREGD LQYYPFRMTP 360
YLMKVQDAEL NEEQFCCLLL AERVHSGYEA PRIPPDKRIF TTTHTPNCVF QDVDERAVPL 420
LGYLPQDLIG TPVLLNLHPS DRPLMLAVHR KILQYAGQPF DHSSIRFFAR NGEYITVDSS 480
WSSFVNPWSR KVSFVIGRHK VRMGPVNEDV FAAQPFHGGK IMDSDIQEIS EQIHRLLLQP 540
IHNMGSSGYG SHGSNGSHEQ QVSISSSSES NGNAGRTTEE MGKAKPTRTF QEICKGVHML 600
KNQDSQAGLP SPTAQPQKGS ALRSKDSAAA VRDSTAGSLE DFPCKDHTVH SYQQISCLDS 660
VIRYLESCNI PVTVKRKYQF SSNTTSSNSD DDKKATEDCV QVPQENPDPL MLDAQSGLSN 720
IKDPKKPPPG AAAVVGGPLA PLTLPSKAES VVSITSQCSY SSTIVHVGDK KPQPESEIIE 780
DVAESPAPPA LPVSVVSPPS QEKEAYKRLG LTKQVLAAHT QKEEQAFLTR CRELINTRTF 840
QRDCSTYLHK QRGPTIVEET PGPRGATRQG TTRPETTVKK GIRNRKSKKP RMKHPDSSDS 900
TVSNRKPRPP LQGLNQTSWS PSEASQSAFN VSYPTMVPTY PLFPPAPTAP APAPLPDPSI 960
SAGFGDSQNT QASTTAAPFP APIVTPIVAL VLPNYLFPQI GQIGQLAAAP SQPAYAAQQP 1020
FQPAQPAYAM QTQPPFAPQA AYASQTPFAA QPSFPVQTQF VAQTPYPAQP FPYSLASETP 1080
KSVVRDGAAS RSSTPASGAR EPTTSPTLFE SRCSSPLQLN LLSMEEGHRS IERQDSTAPS 1140
VGGQGNSTAA GSGSVGIAGE KSRGTAMTEN HQQVESPGHG AHSDGNSSSC DLLDILLQEQ 1200
EDSHSATSGS TGCGTSASGA SGSRAEWQIG SSNTSKYFGS VDSLEHDHQA KAKGKTRCEE 1260
GEHFIKYVLQ EPLWLLMANA DDKVMMTYQM PPRDIQKVLR EDKERLRQMQ KSQPHFSSDQ 1320
RRELVEEHPW MRRGGLPAAI NVKDCVYCED AAAAPIEEDL PDMDMGELGE EIIQESQNKQ 1380
SQSEKPQPQQ DAGSPAPMCD T 1401
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-EqC-020992Equus caballus44.73 0.00e+00 943.7
CGD-GaG-021834Gallus gallus48.64 0.00e+00 1050.8
CGD-HoS-021036Homo sapiens (Human)45.56 0.00e+00 972.6
CGD-MuM-021066Mus musculus (Mouse)44.81 0.00e+00 939.1
CGD-RaN-022186Rattus norvegicus44.5 0.00e+00 936
Gene Ontology

GO:0005515--protein binding