CGDB Gene Information


Tag Content
CGDB ID CGD-AiM-035243
Ensembl Accession ENSAMEP00000015716.1
Protein Name PER2
Ensembl Information ENSAMEG00000014831; ENSAMET00000016369
Organism Ailuropoda melanoleuca
NCBI Taxa ID 9646
Circadian Information
Phase Amplitude
(FOLD)
Tissue/Cell Evidence
Peak Trough External
condition
ZT 12 ZT 0 LD >10 Predicted from orthologs Q65ZG8
ZT 6 ZT 18 LD 5 skeletal muscle Predicted from orthologs F6ZZH0
ZT 21 ZT 9 LD 6 duodenum Predicted from orthologs Q8QGQ8
ZT 2 ZT 18 LD 3.17 embryos Predicted from orthologs Q8QGQ8
ZT 6 ZT 18 LD 8 embryos Predicted from orthologs Q8QGQ8
CT 12 CT 0 DD1 3 granulosa cells Predicted from orthologs Q8QGQ8
ZT 3 ZT 18 LD 84.29 pineal glands Predicted from orthologs Q8QGQ8
ZT 23 ZT 11 LD 2.25 spleen Predicted from orthologs Q8QGQ8
CT 4 CT 12 DD2 27 aortic smooth muscle cells Predicted from orthologs O15055
ZT 4 ZT 21 LD 5 human HaCaT keratinocytes Predicted from orthologs O15055
ZT 1 ZT 19 LD 2.67 human hair follicle cells Predicted from orthologs O15055
CT 12 CT 0 LL1 3.43 oral mucosa Predicted from orthologs O15055
CT 3 CT 15 DD2 5 U2OS cells Predicted from orthologs O15055
CT 6 CT 18 DD1 4 SCN Predicted from orthologs O54943
CT 9 CT 3 DD1 3 eye Predicted from orthologs O54943
ZT 19 ZT 7 LD 2.5 amygdala Predicted from orthologs O54943
ZT 12 ZT 4 LD 2 bone Predicted from orthologs O54943
ZT 13 ZT 5 LD 2.4 bone marrow Predicted from orthologs O54943
ZT 18 ZT 6 LD 1.89 brain Predicted from orthologs O54943
ZT 15 ZT 23 LD 3 cortex Predicted from orthologs O54943
ZT 13 ZT 2 LD 10 heart Predicted from orthologs O54943
ZT 13 ZT 1 LD 2.5 hippocampus Predicted from orthologs O54943
ZT 16 ZT 0 LD 25 jejunum Predicted from orthologs O54943
ZT 15 ZT 23 LD 6 kidney Predicted from orthologs O54943
CT 15 CT 3 DD1 4 liver Predicted from orthologs O54943
ZT 16 ZT 4 LD 7 liver Predicted from orthologs O54943
CT 18 CT 6 DD2 10 MEFs Predicted from orthologs O54943
ZT 17 ZT 1 LD 6 megakaryocytes Predicted from orthologs O54943
ZT 18 ZT 6 LD 3 n primary visualcortex (V1) Predicted from orthologs O54943
CT 0 CT 12 DD2 10 NIH-3T3 cells Predicted from orthologs O54943
CT 12 CT 0 DD3 4.79 ovary Predicted from orthologs O54943
ZT 12 ZT 4 LD 5 pituitary gland Predicted from orthologs O54943
CT 12 CT 20 DD3 5 retina Predicted from orthologs O54943
ZT 12 ZT 16 LD 5 retina Predicted from orthologs O54943
CT 12 CT 20 DD3 6 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
ZT 0 ZT 16 LD 2 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
CT 9 CT 21 DD1 6 SCN Predicted from orthologs O54943
CT 8 CT 16 DD1 20 SCN Predicted from orthologs O54943
CT 15 CT 3 DD1 3 skeletal muscle Predicted from orthologs O54943
CT 14 CT 2 DD3 12 suprachiasmatic nucleus (SCN) Predicted from orthologs O54943
ZT 16 ZT 4 LD 9 abdominal adipose tissue Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 anterior cingulate Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 2.05 area postrema Predicted from orthologs Q9Z301
ZT 18 ZT 2 LD 6.38 AV3V Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 14 basolateral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 10 ZT 6 LD 2 caudal ventrolateral medulla Predicted from orthologs Q9Z301
CT 12 CT 8 DD17 4.35 colon Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 3.29 dorsal vagal motor nucleus Predicted from orthologs Q9Z301
ZT 2 ZT 14 LD 1.8 dorsomedial nucleus Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 5.5 entral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 5.7 heart Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 15 hippocampus Predicted from orthologs Q9Z301
ZT 16 ZT 3 LD 57 intestinal jejunal mucosa Predicted from orthologs Q9Z301
CT 16 CT 4 DD17 5 liver Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 8.5 liver Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q9Z301
ZT 0 ZT 12 LD 7 nucleus accumbens shell Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.07 nucleus ambiguus Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.63 paraventricular nucleus Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 4 prefrontal cortex Predicted from orthologs Q9Z301
ZT 12 ZT 8 LD 2.5 PVN Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 rostral agranular insula Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 3.92 SCN Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
Descriptionperiod circadian clock 2 [Source:HGNC Symbol;Acc:HGNC:8846](View all)
Protein Sequence
(Fasta)
SQLHCGANMN RYAEYPASPG HPAQKPEEPE PRGAPVQEDV PMSSGSSGNE TNDNRSPGRD 60
SRGGQELGML VGPPIVPPGP DAFGLMMAKS KHSTSASGCS HSEQSAKADA HKELIKTLRE 120
LKVHLPVDKK AKGKASMLAT LKYALRSVKQ VEANEEYYQL LMSSENHPCS ASVPSYSIEE 180
IESVTSDFIV KNVGMFAAAV SLVTGKILYI SDQVASIFHC RRDAFYGARF VEFLAPHDVS 240
VFHTSTTPYK LPPWSVCSRP DSFTRECMEE KSFFCRVSVG KNHENEIRYH PFRMTPYLVK 300
VRDPQGTGGQ LCCVLLAERV HSGYEAPRIP PEKRIFTTTH TPNCLFQDVD ERAVPLLGYL 360
PQDLIETPML VQLHPSDRPL MLTIHRKIVQ SGGQPFDYSP IRFRARNGEY LTLDTSWSSF 420
INPWSRKISF IIGRHRVRVG PLNEDVFSAQ SPMEEKDAPP SVQGLAEQIH RLLLQPIPHS 480
GSSGYGSLGS NGSHEHLMSQ TSSSDSNGHE DSRRRRTEIC KNGGNVKDKS HPGESGEQKG 540
DSAAEKPNSS SAQMKAVPVE QDSSGTSLPT GGFPEELGCR NPPAGSYQQI SCLDSVIRYL 600
ESCSEAATLK RKCEFPVNVA TQKASDKRQA VASPRLHSAE TASPSRVNSH AEVSAHLPSL 660
ALPSKAESVV SLTSQCSYSS TIVHVGDKKP QPELELVEDA VSGPESPDRR PCVPGSEKEP 720
LRTLGLTKEV LAAHTQKEEH TFLLKFREMR KLNIFQSRCH HYLQEKSKGQ LSERTAPGLR 780
NTSGIDSSWK KTGKNRKLKS KRAKPRDSSE STGSGGPAPH RPPLMGLNAT AWSPSDTSQS 840
SCPTAPFPAS VPAYSLPVFP APGIMPTPGT VAGAPVAPQA SFAVSAVPMD TQHEFAIQPP 900
PFAVPLAPVM ALVLPNYSFT SVTPSLPQAF FPGQPNFLSE MIPASQPELP GRTSPPKLPC 960
TCPTPASPPP ASGPPGRASP PLFQSRGSSP LQLNLLQLEE APEGSAVATG TAGSSGTAGA 1020
GPDCKPAASW DRQPKPSPIR EEPANARNSD ALSTSSGLLD LLLHEDLCSA TGSALSGSGA 1080
SAASDSLGSG SLGCDASRSG TGSSDTSHTS KYFGSVDSSE NNHKAKAKAA VEGSKQFIKY 1140
VLQDPVWLLM ADTDDSVMMT YQMPSRNLET VLKEDREKLR VIRKSQPRFT EGQRQELQDV 1200
HPWLRAGRLP AALDLAECVY CENKGQDNIW APYEEEMPAL GLSEAAEDKE EKSGVPSSHK 1260
SEERT 1265
Nucleotide Sequence
(Fasta)
TCCCAGCTGC ATTGTGGAGC CAACATGAAC AGATATGCCG AGTACCCCGC CAGCCCTGGT 60
CACCCCGCCC AGAAGCCCGA GGAGCCTGAG CCCCGCGGAG CCCCGGTCCA GGAAGACGTG 120
CCCATGAGCA GTGGCTCTAG CGGAAATGAA ACCAACGACA ACCGCTCCCC AGGGCGGGAC 180
TCGCGGGGCG GCCAGGAGCT GGGGATGCTG GTGGGGCCGC CCATCGTCCC CCCGGGTCCT 240
GATGCCTTTG GCCTCATGAT GGCAAAGTCC AAACACAGCA CGTCTGCAAG CGGCTGCAGT 300
CACAGCGAGC AGTCCGCCAA AGCAGATGCA CACAAGGAAC TGATAAAAAC GCTGAGGGAG 360
CTGAAGGTCC ACCTGCCGGT AGACAAGAAG GCCAAAGGGA AAGCCAGCAT GCTGGCCACC 420
TTGAAGTACG CACTAAGGAG CGTGAAGCAG GTGGAAGCCA ACGAAGAGTA TTACCAGCTG 480
CTCATGTCCA GTGAGAACCA CCCCTGCAGC GCCAGCGTGC CCTCGTACAG CATAGAAGAA 540
ATCGAGAGCG TCACTTCCGA TTTCATTGTG AAGAATGTGG GTATGTTTGC TGCAGCCGTG 600
TCTCTGGTCA CCGGGAAAAT CCTGTACATC TCTGACCAAG TTGCCTCCAT CTTTCACTGT 660
AGAAGGGACG CTTTCTATGG CGCCAGGTTC GTGGAGTTCC TGGCGCCCCA CGATGTCAGC 720
GTGTTCCACA CCTCCACCAC GCCTTACAAG CTCCCGCCCT GGAGCGTGTG CAGCAGGCCA 780
GACTCCTTTA CTCGAGAATG CATGGAGGAG AAATCTTTCT TCTGCCGCGT CAGTGTTGGG 840
AAAAACCACG AGAACGAGAT TCGCTACCAC CCTTTCCGCA TGACGCCTTA CCTGGTCAAG 900
GTGCGGGACC CGCAGGGCAC GGGGGGTCAG CTGTGCTGCG TGCTGCTGGC AGAGAGAGTG 960
CACTCGGGCT ACGAAGCCCC TAGAATTCCT CCTGAAAAGA GAATTTTTAC GACCACACAT 1020
ACACCAAATT GTCTGTTCCA GGATGTGGAC GAAAGGGCCG TCCCCCTCCT GGGCTACCTA 1080
CCTCAGGACC TGATCGAGAC CCCTATGCTC GTGCAGCTTC ACCCCAGTGA CAGGCCTTTG 1140
ATGCTCACCA TCCACAGAAA GATTGTGCAG TCCGGCGGGC AGCCCTTCGA CTATTCTCCC 1200
ATTCGGTTCC GTGCCCGGAA CGGCGAGTAC CTCACTCTGG ACACCAGCTG GTCCAGCTTC 1260
ATCAACCCGT GGAGCAGAAA GATCTCCTTC ATCATCGGCA GACACAGAGT CAGGGTGGGC 1320
CCTTTGAATG AGGACGTGTT CTCAGCTCAG TCGCCCATGG AGGAGAAGGA CGCGCCCCCC 1380
AGCGTTCAGG GGCTCGCGGA GCAGATCCAC CGGCTGCTGC TGCAGCCCAT CCCCCACAGC 1440
GGCTCCAGCG GCTACGGGAG CCTGGGCAGC AATGGGTCCC ATGAGCACCT CATGAGCCAG 1500
ACGTCCTCGA GCGACAGCAA CGGTCACGAG GACTCCCGCC GGAGGAGGAC CGAAATTTGT 1560
AAAAATGGTG GCAACGTCAA AGACAAAAGT CATCCTGGGG AATCTGGAGA ACAAAAGGGA 1620
GACTCCGCGG CAGAAAAGCC AAATAGTTCC TCTGCTCAGA TGAAAGCTGT CCCCGTGGAA 1680
CAGGACAGCT CGGGCACCAG CCTGCCCACA GGCGGCTTTC CCGAGGAGCT GGGCTGCAGG 1740
AACCCGCCCG CTGGGTCCTA CCAACAGATC AGCTGCCTGG ACAGCGTCAT CAGGTACCTG 1800
GAGAGCTGCA GTGAGGCGGC CACCCTCAAG AGGAAGTGTG AGTTCCCGGT GAACGTGGCA 1860
ACGCAGAAGG CCAGCGATAA GCGACAGGCA GTGGCCAGCC CCAGGCTGCA TTCCGCAGAG 1920
ACGGCATCAC CCTCCAGGGT GAACAGCCAC GCGGAGGTCA GCGCGCACCT GCCCTCACTG 1980
GCCCTGCCCA GCAAGGCGGA GAGCGTGGTG TCCCTAACCA GCCAGTGCAG CTACAGCAGC 2040
ACCATCGTCC ACGTGGGCGA CAAGAAGCCA CAGCCTGAGC TCGAGCTGGT GGAAGATGCT 2100
GTGAGCGGGC CCGAGTCTCC AGACAGACGG CCGTGTGTCC CGGGCTCAGA GAAGGAGCCC 2160
CTCAGGACGC TGGGCCTCAC CAAGGAAGTG CTGGCTGCCC ACACCCAGAA GGAGGAGCAC 2220
ACCTTCCTGC TCAAGTTCAG GGAGATGCGG AAACTCAACA TCTTCCAGTC TCGCTGCCAT 2280
CATTACTTAC AGGAAAAGTC CAAGGGGCAG TTGAGTGAGA GAACTGCACC AGGACTAAGA 2340
AATACTTCTG GAATAGATTC ATCTTGGAAA AAAACTGGGA AGAACAGAAA ACTGAAGTCC 2400
AAACGGGCCA AGCCTCGAGA CTCCTCCGAG AGCACTGGGT CTGGGGGGCC TGCACCCCAC 2460
CGGCCTCCAT TGATGGGACT GAACGCCACA GCCTGGTCAC CATCGGACAC GTCCCAGTCC 2520
AGCTGCCCCA CGGCGCCCTT TCCTGCCTCA GTGCCTGCTT ACTCCCTGCC TGTGTTTCCA 2580
GCCCCAGGAA TCATGCCCAC ACCAGGGACG GTGGCGGGGG CACCCGTGGC TCCCCAGGCC 2640
AGCTTCGCGG TGTCCGCCGT GCCCATGGAC ACCCAGCACG AGTTTGCCAT CCAGCCCCCT 2700
CCATTCGCTG TCCCCTTGGC CCCAGTCATG GCGTTGGTGT TACCCAACTA TTCCTTCACT 2760
TCGGTGACCC CCAGCCTGCC CCAAGCCTTC TTCCCAGGCC AGCCTAACTT TCTGTCTGAG 2820
ATGATCCCTG CCTCGCAGCC TGAGCTCCCT GGTAGGACTT CACCCCCCAA ACTGCCATGC 2880
ACGTGTCCCA CCCCAGCCTC CCCGCCGCCT GCCTCTGGGC CCCCGGGCAG AGCCTCCCCT 2940
CCGCTCTTCC AGTCCCGGGG CAGCTCACCT CTGCAGCTCA ACCTGCTGCA GCTGGAGGAG 3000
GCCCCCGAGG GCAGCGCCGT GGCCACGGGG ACAGCAGGGT CCTCGGGGAC CGCGGGCGCG 3060
GGGCCGGACT GCAAACCTGC CGCATCCTGG GACCGACAGC CGAAGCCGTC GCCAATCCGT 3120
GAGGAACCCG CCAACGCCCG GAACAGCGAT GCCCTCTCCA CATCCAGCGG CCTGCTTGAC 3180
CTCTTGCTGC ACGAGGACCT GTGCTCCGCC ACAGGGTCAG CCCTGTCTGG GAGCGGGGCC 3240
TCTGCCGCCT CCGATTCCCT GGGCTCCGGC TCGCTGGGCT GTGATGCGTC CAGAAGTGGG 3300
ACAGGCAGCA GTGACACAAG TCATACCAGC AAATACTTTG GAAGTGTTGA CTCTTCAGAG 3360
AATAATCACA AAGCAAAAGC GAAGGCGGCC GTGGAGGGAA GTAAGCAGTT CATCAAGTAC 3420
GTCCTCCAGG ACCCCGTCTG GCTGCTGATG GCCGACACGG ATGACAGCGT CATGATGACC 3480
TACCAGATGC CTTCCCGGAA TCTGGAAACG GTGTTGAAGG AAGACCGGGA GAAGCTGAGA 3540
GTGATACGGA AGTCCCAGCC CCGGTTCACG GAGGGCCAGA GGCAGGAGCT ACAGGACGTG 3600
CACCCGTGGC TGCGGGCCGG CCGCCTGCCC GCCGCCCTGG ACCTCGCGGA ATGTGTTTAC 3660
TGTGAGAACA AGGGACAAGA CAACATCTGG GCACCGTATG AGGAAGAGAT GCCTGCTCTG 3720
GGTCTCAGCG AAGCCGCAGA GGACAAAGAG GAGAAAAGTG GAGTCCCCTC GAGTCACAAA 3780
AGTGAAGAGC GGACCTAA 3798
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-CaE-021686Caenorhabditis elegans26.26 1.20e-17 89.74
CGD-EqC-020992Equus caballus71.4 0.00e+00 1697.2
CGD-GaG-021834Gallus gallus50.85 0.00e+00 1173.7
CGD-HoS-021036Homo sapiens (Human)66.95 0.00e+00 1662.9
CGD-MuM-021066Mus musculus (Mouse)63.84 0.00e+00 1565.8
CGD-RaN-022186Rattus norvegicus63.36 0.00e+00 1553.5
Gene Ontology

GO:0005515--protein binding
GO:0005654--nucleoplasm
GO:0005634--nucleus
GO:0005737--cytoplasm