CGDB Gene Information

Tag Content
CGDB ID CGD-CaF-038893
Ensembl Accession ENSCAFP00000018297.3
Protein Name PER2
Ensembl Information ENSCAFG00000012433; ENSCAFT00000019727
Organism Canis familiaris
NCBI Taxa ID 9615
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 6 ZT 18 LD 5 skeletal muscle Predicted from orthologs F6ZZH0
ZT 21 ZT 9 LD 6 duodenum Predicted from orthologs Q8QGQ8
ZT 2 ZT 18 LD 3.17 embryos Predicted from orthologs Q8QGQ8
ZT 6 ZT 18 LD 8 embryos Predicted from orthologs Q8QGQ8
CT 12 CT 0 DD1 3 granulosa cells Predicted from orthologs Q8QGQ8
ZT 3 ZT 18 LD 84.29 pineal glands Predicted from orthologs Q8QGQ8
ZT 23 ZT 11 LD 2.25 spleen Predicted from orthologs Q8QGQ8
CT 4 CT 12 DD2 27 aortic smooth muscle cells Predicted from orthologs O15055
ZT 4 ZT 21 LD 5 human HaCaT keratinocytes Predicted from orthologs O15055
ZT 1 ZT 19 LD 2.67 human hair follicle cells Predicted from orthologs O15055
CT 12 CT 0 LL1 3.43 oral mucosa Predicted from orthologs O15055
CT 3 CT 15 DD2 5 U2OS cells Predicted from orthologs O15055
CT 6 CT 18 DD1 4 SCN Predicted from orthologs O54943
CT 9 CT 3 DD1 3 eye Predicted from orthologs O54943
ZT 19 ZT 7 LD 2.5 amygdala Predicted from orthologs O54943
ZT 12 ZT 4 LD 2 bone Predicted from orthologs O54943
ZT 13 ZT 5 LD 2.4 bone marrow Predicted from orthologs O54943
ZT 18 ZT 6 LD 1.89 brain Predicted from orthologs O54943
ZT 15 ZT 23 LD 3 cortex Predicted from orthologs O54943
ZT 13 ZT 2 LD 10 heart Predicted from orthologs O54943
ZT 13 ZT 1 LD 2.5 hippocampus Predicted from orthologs O54943
ZT 16 ZT 0 LD 25 jejunum Predicted from orthologs O54943
ZT 15 ZT 23 LD 6 kidney Predicted from orthologs O54943
CT 15 CT 3 DD1 4 liver Predicted from orthologs O54943
ZT 16 ZT 4 LD 7 liver Predicted from orthologs O54943
CT 18 CT 6 DD2 10 MEFs Predicted from orthologs O54943
ZT 17 ZT 1 LD 6 megakaryocytes Predicted from orthologs O54943
ZT 18 ZT 6 LD 3 n primary visualcortex (V1) Predicted from orthologs O54943
CT 0 CT 12 DD2 10 NIH-3T3 cells Predicted from orthologs O54943
CT 12 CT 0 DD3 4.79 ovary Predicted from orthologs O54943
ZT 12 ZT 4 LD 5 pituitary gland Predicted from orthologs O54943
CT 12 CT 20 DD3 5 retina Predicted from orthologs O54943
ZT 12 ZT 16 LD 5 retina Predicted from orthologs O54943
CT 12 CT 20 DD3 6 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
ZT 0 ZT 16 LD 2 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
CT 9 CT 21 DD1 6 SCN Predicted from orthologs O54943
CT 8 CT 16 DD1 20 SCN Predicted from orthologs O54943
CT 15 CT 3 DD1 3 skeletal muscle Predicted from orthologs O54943
CT 14 CT 2 DD3 12 suprachiasmatic nucleus (SCN) Predicted from orthologs O54943
ZT 16 ZT 4 LD 9 abdominal adipose tissue Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 anterior cingulate Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 2.05 area postrema Predicted from orthologs Q9Z301
ZT 18 ZT 2 LD 6.38 AV3V Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 14 basolateral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 10 ZT 6 LD 2 caudal ventrolateral medulla Predicted from orthologs Q9Z301
CT 12 CT 8 DD17 4.35 colon Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 3.29 dorsal vagal motor nucleus Predicted from orthologs Q9Z301
ZT 2 ZT 14 LD 1.8 dorsomedial nucleus Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 5.5 entral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 5.7 heart Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 15 hippocampus Predicted from orthologs Q9Z301
ZT 16 ZT 3 LD 57 intestinal jejunal mucosa Predicted from orthologs Q9Z301
CT 16 CT 4 DD17 5 liver Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 8.5 liver Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q9Z301
ZT 0 ZT 12 LD 7 nucleus accumbens shell Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.07 nucleus ambiguus Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.63 paraventricular nucleus Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 4 prefrontal cortex Predicted from orthologs Q9Z301
ZT 12 ZT 8 LD 2.5 PVN Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 rostral agranular insula Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 3.92 SCN Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
Descriptionperiod circadian clock 2 [Source:HGNC Symbol;Acc:HGNC:8846](View all)
Protein Sequence
(Fasta)		 MNRYTEYPPS PSHPAQEPVE AEPSGAPLQE DVHMSSGSSG NEANENHSPG RDSQGSEELG 60
MLVGPPVVHP SPGAFGLMMA KSEHSTSASG CSEQSAKADA HKELIKTLKE LKVHLPVDKK 120
AKGKASTLAT LKYALRSVKQ VKANEEYYQL LMSSENHPCS AYVPSYTVEE IESVTSEFTV 180
KNAGMFAAAV SLATGKILYI SDQVASIFHC KRDAFYGARF VEFLAPHDVS VFHASTTPYK 240
LPPWSVGRGA DSFTQECMEE KSFFCRVSVG KNHENEIGYH AFSMTPYLVK VREQQCAGSQ 300
LCCVLLAERV HSAYEAPRIP PEKRIFTTTH TPNCLFQDVD ERAVPLLGYL PQDLIETPVL 360
VRLHPGDRPL MVTVHKKIVQ SGGQPFDYSP IRFRARNGEY VTLDTSWSSF INPWSRKISF 420
IIGRHRVRVG PLNEDVFSAP SLVEEKDQHP SIQELTEQIH RLLLQPVPHS GSSGYGSLGS 480
NGSHEHLMSQ TSSSDSNGHE DSRRRRTEIC KNGSSVKNKS HPGESGEQKE KSVAEMHSSS 540
PAQMKAVPVE KDSSGTSLPA GSSPEELGCK NPPAGSYQQI SCLDSVIRYL ESCSEAATLK 600
RKCEFLGNMA TQKASDKRKA VASPGLHSTD TTLPTKVNSH AEVSAHLPPL TLPCKAESVV 660
SLTSQCSYSS TIVHVGDKKP QPELELVEDA VSGPESPDGR PCSLGPEKEP LRTLGLTKEV 720
LAAHTQKEEQ SFLLRFKEMR KLSIFQSRCH HYLQEKSKGQ LSERTTPGLR NASGIDSSWK 780
KTGKNRKLKS KRAKPRDSSE STGSGGPAPL RPPLLGLNAT AWSPSDTSQS SCPTTPFPAS 840
VPAYPLPVFP APGILPTPGA VAAAPVAPHA SFAVPPLPVD ARHEFGLQPS PFAVPLAPVM 900
ALVLPNYPLP AVPPGLPQAF FPGQPDFLSH VIPASQPELA GRTSPPKQPC ACPQAERGPA 960
ASRAATPASP APASGPTGRA SPPLFQSRGS SPLQLNLLQL EEAPEGSSAA AATAGSSGTA 1020
GPDCKPGTSW DRQPKTAPIR EDPADAQNSD ALSTSSGLLD LLLHEDLCSA TGSALSRSGA 1080
SATSDSLGSG SLGCDTSRSG TGSSDTSHTS KYFGSIDSSE NNHQAKMKAD MEESKHFIKY 1140
VLQDPVWLLM ADTDDSVMMT YQMPSRNLET VLKEDREKLK AMQKSQPRFT EGQRQELQDV 1200
HPWLRAGGLP TALDLTECVY CENQGPDSIC VPYEEDSPTL GPSEATDTQE KERGAPSGCS 1260
REERT 1265
Nucleotide Sequence
(Fasta)		 ATGAACAGAT ACACCGAATA CCCACCCAGC CCCAGTCACC CCGCCCAGGA GCCCGTGGAG 60
GCTGAGCCCA GTGGAGCTCC GCTCCAGGAA GATGTTCACA TGAGCAGTGG CTCTAGTGGA 120
AATGAAGCCA ACGAAAACCA CTCCCCAGGG CGGGACTCGC AGGGCAGCGA GGAGCTGGGG 180
ATGCTGGTGG GGCCGCCCGT CGTCCACCCA AGTCCAGGTG CCTTTGGCCT CATGATGGCG 240
AAGTCCGAAC ACAGCACGTC TGCAAGTGGC TGCAGCGAGC AGTCTGCCAA AGCGGATGCG 300
CACAAGGAAC TGATAAAAAC CCTGAAGGAG CTGAAAGTCC ACCTGCCTGT GGACAAGAAG 360
GCCAAAGGGA AAGCCAGCAC ATTGGCAACC TTGAAGTACG CGCTCAGGAG CGTGAAGCAG 420
GTGAAAGCCA ACGAGGAGTA TTACCAGCTG CTCATGTCCA GCGAGAACCA CCCCTGCAGT 480
GCCTACGTGC CCTCCTACAC CGTGGAAGAA ATTGAGAGTG TCACCTCCGA GTTCACCGTG 540
AAGAACGCGG GTATGTTTGC TGCGGCCGTG TCCCTGGCCA CCGGGAAAAT CCTGTACATC 600
TCTGACCAAG TTGCCTCCAT CTTTCACTGT AAAAGGGATG CCTTCTACGG TGCCAGGTTC 660
GTGGAGTTCC TGGCGCCCCA CGACGTCAGC GTGTTCCATG CCTCGACCAC GCCTTACAAG 720
CTTCCGCCCT GGAGTGTGGG CCGTGGAGCA GATTCATTTA CTCAAGAATG TATGGAGGAG 780
AAATCTTTCT TCTGCCGTGT CAGTGTTGGG AAAAACCACG AGAACGAGAT AGGTTACCAC 840
GCGTTCAGTA TGACTCCTTA CCTGGTCAAG GTGCGGGAGC AGCAGTGCGC CGGGAGCCAG 900
CTGTGCTGCG TGCTGCTGGC AGAGAGAGTG CACTCAGCCT ACGAAGCCCC TAGAATTCCT 960
CCTGAAAAGA GAATTTTTAC GACCACACAT ACACCAAATT GTTTGTTCCA GGACGTGGAT 1020
GAAAGGGCGG TCCCCCTCCT GGGCTACCTA CCTCAGGACC TCATCGAGAC CCCCGTGCTC 1080
GTGCGGCTTC ACCCTGGTGA CAGGCCTTTG ATGGTCACCG TCCACAAAAA GATCGTGCAG 1140
TCCGGTGGGC AGCCCTTCGA CTATTCTCCC ATTCGGTTCC GAGCCCGGAA CGGCGAGTAC 1200
GTCACCCTGG ACACCAGCTG GTCCAGCTTC ATCAACCCGT GGAGCAGAAA AATCTCCTTC 1260
ATCATTGGCA GACACAGAGT CAGGGTGGGC CCATTGAATG AGGATGTGTT CTCGGCTCCA 1320
TCGCTCGTGG AGGAGAAGGA CCAGCACCCC AGCATTCAGG AGCTCACAGA GCAGATCCAC 1380
CGGCTGCTCC TACAGCCTGT GCCCCACAGC GGCTCCAGTG GCTACGGGAG CCTGGGCAGC 1440
AACGGGTCCC ATGAACACCT CATGAGCCAG ACCTCCTCCA GCGACAGCAA TGGTCACGAG 1500
GACTCCCGCC GACGGAGGAC CGAAATTTGT AAAAATGGCA GCAGCGTCAA AAACAAAAGT 1560
CATCCTGGTG AATCTGGAGA ACAAAAGGAA AAATCTGTTG CAGAAATGCA CAGTAGTTCT 1620
CCTGCTCAGA TGAAAGCTGT CCCCGTGGAA AAGGACAGTT CGGGCACCAG CCTGCCCGCG 1680
GGCAGCTCTC CTGAGGAGCT GGGCTGCAAG AACCCTCCTG CCGGCTCCTA CCAGCAGATC 1740
AGCTGCCTGG ACAGCGTCAT CAGGTACCTG GAGAGCTGCA GCGAGGCGGC CACTCTCAAG 1800
AGGAAGTGTG AGTTCCTGGG AAACATGGCG ACCCAGAAGG CCAGCGACAA GCGAAAGGCA 1860
GTGGCCAGCC CCGGGCTGCA TTCCACAGAC ACCACGTTGC CCACCAAGGT GAATAGCCAC 1920
GCCGAGGTTA GTGCACACCT GCCCCCACTG ACGCTGCCCT GCAAGGCGGA GAGTGTGGTG 1980
TCCCTCACCA GCCAGTGTAG CTACAGCAGC ACCATTGTTC ACGTGGGTGA TAAGAAGCCA 2040
CAACCTGAGC TAGAGCTTGT GGAAGATGCC GTGAGCGGCC CCGAGTCTCC GGACGGCCGG 2100
CCCTGCAGCC TGGGCCCGGA GAAGGAGCCG CTCAGGACGC TGGGCCTTAC CAAGGAAGTG 2160
CTGGCCGCCC ACACCCAGAA GGAGGAGCAG AGCTTCCTGC TCAGGTTCAA GGAGATGCGG 2220
AAACTCAGTA TCTTCCAGTC TCGCTGCCAT CATTACTTGC AAGAAAAGTC CAAGGGGCAG 2280
TTGAGTGAGA GAACCACTCC GGGACTAAGA AATGCCTCTG GAATAGATTC ATCTTGGAAA 2340
AAAACCGGGA AGAACAGAAA ACTGAAGTCC AAACGGGCCA AGCCTCGAGA TTCGTCCGAG 2400
AGCACCGGGT CTGGGGGGCC CGCACCCCTC CGGCCCCCGC TGCTGGGCCT GAACGCCACG 2460
GCCTGGTCAC CGTCTGACAC GTCCCAGTCC AGCTGCCCCA CGACGCCCTT CCCTGCCTCG 2520
GTGCCAGCGT ACCCCCTGCC CGTGTTCCCA GCCCCAGGAA TCCTGCCCAC ACCCGGGGCG 2580
GTGGCGGCGG CACCCGTGGC CCCCCACGCC AGCTTCGCGG TGCCCCCCCT GCCCGTGGAC 2640
GCCCGGCACG AGTTTGGCCT CCAGCCCTCG CCGTTCGCCG TCCCCCTGGC CCCGGTCATG 2700
GCACTGGTGT TACCCAACTA TCCCCTCCCC GCCGTGCCCC CCGGCCTGCC CCAGGCCTTC 2760
TTCCCCGGCC AGCCTGACTT TCTGTCGCAC GTGATCCCTG CCTCGCAGCC TGAGCTCGCC 2820
GGTCGGACGT CACCCCCCAA ACAGCCGTGC GCCTGTCCCC AGGCAGAGCG CGGGCCCGCG 2880
GCATCTCGCG CGGCCACCCC GGCCTCCCCG GCGCCGGCCT CGGGGCCCAC GGGCAGGGCG 2940
TCCCCTCCGC TCTTCCAGTC CCGAGGCAGC TCCCCCCTGC AGCTCAACCT GCTGCAGCTG 3000
GAGGAGGCCC CTGAGGGCAG CTCCGCGGCC GCAGCCACAG CGGGGTCCTC GGGGACGGCG 3060
GGGCCCGACT GCAAACCCGG CACCTCCTGG GACCGGCAGC CAAAGACAGC GCCAATCCGT 3120
GAGGACCCCG CCGACGCCCA GAACAGCGAT GCCCTCTCCA CGTCCAGCGG CCTGCTTGAC 3180
CTCTTGCTGC ACGAGGACCT GTGCTCGGCC ACAGGGTCGG CCCTGTCCAG GAGTGGGGCC 3240
TCCGCCACCT CCGATTCCCT GGGCTCTGGC TCTCTGGGCT GCGACACGTC CAGAAGTGGG 3300
ACTGGCAGCA GTGACACAAG TCATACCAGC AAATATTTTG GAAGCATTGA CTCCTCGGAG 3360
AATAATCACC AAGCAAAAAT GAAGGCAGAC ATGGAAGAAA GTAAACACTT CATCAAATAC 3420
GTCCTCCAGG ACCCCGTCTG GCTGCTGATG GCCGACACGG ACGACAGCGT CATGATGACG 3480
TACCAGATGC CTTCCCGGAA CCTGGAGACC GTGTTGAAGG AAGACCGGGA GAAGCTGAAA 3540
GCGATGCAGA AGTCCCAGCC CCGCTTCACG GAGGGCCAGA GGCAGGAGCT GCAGGACGTC 3600
CACCCGTGGC TGCGGGCCGG TGGCCTGCCC ACCGCCCTGG ACCTCACGGA ATGTGTTTAC 3660
TGTGAGAACC AGGGACCGGA CAGTATTTGT GTACCGTACG AGGAAGATAG TCCTACCCTG 3720
GGTCCCAGCG AAGCCACGGA CACCCAGGAG AAGGAACGTG GAGCCCCCTC GGGTTGCAGC 3780
AGGGAAGAGC GGACCTAA 3798
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-EqC-020992Equus caballus69.54 0.00e+00 1634.4
CGD-GaG-021834Gallus gallus50.31 0.00e+00 1139
CGD-HoS-021036Homo sapiens (Human)66.23 0.00e+00 1633.6
CGD-MuM-021066Mus musculus (Mouse)63.52 0.00e+00 1557.7
CGD-RaN-022186Rattus norvegicus62.67 0.00e+00 1541.6
Gene Ontology

GO:0005737--cytoplasm
GO:0005634--nucleus
GO:0005515--protein binding
GO:0005654--nucleoplasm