CGDB Gene Information

Tag Content
CGDB ID CGD-PtV-055162
Ensembl Accession ENSPVAP00000005277.1
Protein Name PER2
Ensembl Information ENSPVAG00000005574; ENSPVAT00000005576
Organism Pteropus vampyrus
NCBI Taxa ID 132908
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 6 ZT 18 LD 5 skeletal muscle Predicted from orthologs F6ZZH0
CT 4 CT 12 DD2 27 aortic smooth muscle cells Predicted from orthologs O15055
ZT 4 ZT 21 LD 5 human HaCaT keratinocytes Predicted from orthologs O15055
ZT 1 ZT 19 LD 2.67 human hair follicle cells Predicted from orthologs O15055
CT 12 CT 0 LL1 3.43 oral mucosa Predicted from orthologs O15055
CT 3 CT 15 DD2 5 U2OS cells Predicted from orthologs O15055
CT 6 CT 18 DD1 4 SCN Predicted from orthologs O54943
CT 9 CT 3 DD1 3 eye Predicted from orthologs O54943
ZT 19 ZT 7 LD 2.5 amygdala Predicted from orthologs O54943
ZT 12 ZT 4 LD 2 bone Predicted from orthologs O54943
ZT 13 ZT 5 LD 2.4 bone marrow Predicted from orthologs O54943
ZT 18 ZT 6 LD 1.89 brain Predicted from orthologs O54943
ZT 15 ZT 23 LD 3 cortex Predicted from orthologs O54943
ZT 13 ZT 2 LD 10 heart Predicted from orthologs O54943
ZT 13 ZT 1 LD 2.5 hippocampus Predicted from orthologs O54943
ZT 16 ZT 0 LD 25 jejunum Predicted from orthologs O54943
ZT 15 ZT 23 LD 6 kidney Predicted from orthologs O54943
CT 15 CT 3 DD1 4 liver Predicted from orthologs O54943
ZT 16 ZT 4 LD 7 liver Predicted from orthologs O54943
CT 18 CT 6 DD2 10 MEFs Predicted from orthologs O54943
ZT 17 ZT 1 LD 6 megakaryocytes Predicted from orthologs O54943
ZT 18 ZT 6 LD 3 n primary visualcortex (V1) Predicted from orthologs O54943
CT 0 CT 12 DD2 10 NIH-3T3 cells Predicted from orthologs O54943
CT 12 CT 0 DD3 4.79 ovary Predicted from orthologs O54943
ZT 12 ZT 4 LD 5 pituitary gland Predicted from orthologs O54943
CT 12 CT 20 DD3 5 retina Predicted from orthologs O54943
ZT 12 ZT 16 LD 5 retina Predicted from orthologs O54943
CT 12 CT 20 DD3 6 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
ZT 0 ZT 16 LD 2 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
CT 9 CT 21 DD1 6 SCN Predicted from orthologs O54943
CT 8 CT 16 DD1 20 SCN Predicted from orthologs O54943
CT 15 CT 3 DD1 3 skeletal muscle Predicted from orthologs O54943
CT 14 CT 2 DD3 12 suprachiasmatic nucleus (SCN) Predicted from orthologs O54943
ZT 16 ZT 4 LD 9 abdominal adipose tissue Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 anterior cingulate Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 2.05 area postrema Predicted from orthologs Q9Z301
ZT 18 ZT 2 LD 6.38 AV3V Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 14 basolateral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 10 ZT 6 LD 2 caudal ventrolateral medulla Predicted from orthologs Q9Z301
CT 12 CT 8 DD17 4.35 colon Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 3.29 dorsal vagal motor nucleus Predicted from orthologs Q9Z301
ZT 2 ZT 14 LD 1.8 dorsomedial nucleus Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 5.5 entral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 5.7 heart Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 15 hippocampus Predicted from orthologs Q9Z301
ZT 16 ZT 3 LD 57 intestinal jejunal mucosa Predicted from orthologs Q9Z301
CT 16 CT 4 DD17 5 liver Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 8.5 liver Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q9Z301
ZT 0 ZT 12 LD 7 nucleus accumbens shell Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.07 nucleus ambiguus Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.63 paraventricular nucleus Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 4 prefrontal cortex Predicted from orthologs Q9Z301
ZT 12 ZT 8 LD 2.5 PVN Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 rostral agranular insula Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 3.92 SCN Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
Descriptionperiod circadian clock 2 [Source:HGNC Symbol;Acc:HGNC:8846](View all)
Protein Sequence
(Fasta)		 MKEFAGFAPS PRSPTQEPVE PTPGPAPLQE DVDMSGGSSG NEASEHRSAG RGLQGGGCGG 60
GGRELGLQAE PPGARQSPDA FSLMMVRPDH NPSTSGCSSE QSVKADSHQE LIKTLKELKV 120
HLPADRKTKG KASTLATLKY ALRSVKQVRA SEEYYQLLVS SESHGCGADV PSYTVGEIEC 180
ATSEFIVKNA DMFAAAVSLV TGKILYISDQ VAPLFHCKRD AFRDAKFVEF LAPHDVGVFH 240
SATTPCRLPP WSVCRGADSF TQECIEEKSF FCRVSVGKNR DSIRHPTMTP YLHHGAQSHL 300
CCVLLAERVH SGYESPRIPP EKRIFTTTHT PNCLFQDVDE RAVPLLGYLP QDLIETSVLL 360
QLHPSDRPLM LAIHRKIVQS GGQPFDYSPL RFRARNGEYV TLDTSWSSFV NPWSRKISFI 420
IGRHRVRVGP LNEDVFSAQP CLEEKALHPG VQELTEQIHR LLLQXXXXXX XXXXXXXXXX 480
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXMQRGS 540
PAQVTAVQAM EDSSGASPPK ATFPEELACK NQPAGSYQQI SCLDGVIRYL ESCSEATTLK 600
RKCEFPTNVP TQKASDKRKA TGSPGPPPTE AAAPSGINRH ADVSARLPSL TLPGKAESVV 660
SLTSQCSYSS TIVHVGDKKP QPELETVGDP ASGPESLDCG LGQDQEPFRR LGLTKEVLAA 720
HTQKEEQSFL LKFKETRKLS VLQSRCHYYL QERSKGQAAE RXXXXXXXXX XXXXXXXXXX 780
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 840
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 900
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 960
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 1020
XXXXXRDEPS DAQNSDALST SSDLFDLLLR EDLCSAAGSA TSDSLGSSSL GCDVSRSGTG 1080
SSDTGHTSKY FGSIDSSENN HKAKVKTDMD ESEHFVKYVL QDPIWLLMAD TDDSVMMTYQ 1140
MPSRNLEAVL NEDREKLMLL QKLQPFTEGQ KQERVHPWVX XXXXXXXXXX XECVYCESKG 1200
KGDICVPYEE DSPALGLGEV AGTKEEENGP PSSHENGEQT
Nucleotide Sequence
(Fasta)		 ATGAAAGAGT TTGCGGGGTT CGCCCCCAGC CCCAGGAGCC CCACCCAGGA GCCCGTGGAG 60
CCCACGCCCG GCCCGGCCCC GCTCCAGGAG GACGTGGACA TGAGCGGCGG CTCCAGCGGA 120
AACGAAGCCA GCGAACACCG CTCCGCGGGG CGGGGCTTGC AGGGCGGCGG CTGTGGCGGC 180
GGCGGCAGGG AGCTGGGGCT GCAGGCGGAG CCGCCCGGCG CCCGCCAGAG TCCTGACGCC 240
TTCAGCCTGA TGATGGTAAG GCCTGACCAC AACCCCTCGA CGAGCGGCTG CAGCAGTGAG 300
CAGTCCGTCA AGGCGGACTC GCACCAGGAG CTGATCAAAA CGCTCAAGGA GCTGAAGGTC 360
CACCTCCCCG CGGACAGGAA GACCAAGGGA AAGGCCAGCA CATTGGCCAC CCTGAAGTAT 420
GCCCTGAGGA GCGTGAAGCA AGTGAGAGCC AGCGAGGAGT ACTACCAGCT GCTGGTGTCC 480
AGCGAGAGCC ACGGCTGCGG CGCCGACGTG CCGTCCTACA CCGTGGGCGA GATCGAGTGC 540
GCCACCTCCG AGTTCATCGT GAAGAACGCG GACATGTTTG CTGCGGCCGT GTCCCTGGTC 600
ACCGGGAAAA TCCTGTACAT CTCTGACCAG GTGGCCCCCC TCTTCCACTG TAAGAGAGAC 660
GCCTTTCGTG ATGCCAAATT CGTGGAGTTC TTGGCGCCCC ACGACGTGGG CGTGTTCCAC 720
AGCGCAACCA CGCCGTGCCG GCTTCCGCCG TGGAGCGTCT GCAGGGGGGC AGATTCTTTC 780
ACTCAAGAAT GCATAGAGGA GAAATCTTTC TTCTGCCGTG TCAGTGTCGG GAAGAACCGT 840
GACAGCATCC GCCACCCTAC CATGACACCC TACCTGCATC ATGGCGCCCA AAGCCACCTG 900
TGCTGCGTGC TGCTGGCAGA GAGGGTGCAC TCCGGCTACG AATCCCCTAG AATTCCTCCC 960
GAAAAGAGAA TTTTCACGAC CACACATACA CCAAACTGCC TGTTCCAGGA CGTGGACGAA 1020
AGGGCGGTCC CCCTCCTGGG CTACCTGCCT CAGGACCTGA TCGAGACGTC CGTGCTCCTG 1080
CAGCTTCACC CCAGCGACAG GCCCCTGATG CTCGCCATCC ACAGAAAGAT CGTGCAGTCC 1140
GGCGGCCAGC CTTTCGACTA CTCGCCCCTG CGGTTCCGCG CCCGCAACGG GGAGTACGTC 1200
ACGCTGGACA CCAGCTGGTC CAGCTTCGTC AACCCTTGGA GCAGGAAGAT CTCCTTCATC 1260
ATCGGGCGAC ACAGAGTCAG GGTGGGCCCT TTGAATGAGG ACGTGTTCTC CGCTCAGCCG 1320
TGCCTGGAGG AGAAGGCCCT GCACCCTGGC GTTCAAGAGC TCACGGAGCA GATCCACCGG 1380
CTGCTGCTGC AGNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1440
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1500
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1560
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNAAATGCA AAGGGGTTCC 1620
CCTGCTCAAG TGACAGCCGT CCAGGCCATG GAGGACAGCT CAGGTGCCAG CCCACCCAAG 1680
GCCACCTTTC CCGAGGAGCT GGCTTGCAAG AACCAGCCGG CCGGCTCGTA CCAGCAGATC 1740
AGCTGCCTAG ACGGCGTCAT CAGGTATCTG GAGAGCTGCA GTGAGGCCAC CACCCTGAAG 1800
AGGAAGTGTG AGTTCCCCAC AAATGTCCCC ACACAGAAGG CCAGCGACAA GCGGAAGGCC 1860
ACAGGCAGCC CCGGGCCACC TCCCACAGAG GCAGCTGCAC CCTCTGGAAT AAACAGGCAC 1920
GCGGACGTCA GTGCACGCTT GCCGTCACTG ACGCTGCCGG GCAAGGCGGA GAGCGTGGTG 1980
TCCCTCACCA GCCAGTGCAG CTACAGCAGC ACCATCGTGC ACGTGGGTGA CAAGAAGCCG 2040
CAGCCCGAGC TAGAGACCGT GGGAGACCCT GCCAGTGGGC CCGAGTCCCT GGACTGCGGC 2100
CTCGGCCAGG ACCAGGAGCC CTTCCGGAGG CTGGGCCTCA CCAAGGAGGT GCTGGCCGCC 2160
CACACCCAGA AGGAGGAGCA GAGCTTCCTG CTGAAGTTCA AGGAAACCAG GAAGCTCAGC 2220
GTTCTCCAGA GTCGCTGCCA CTACTACCTC CAAGAGCGGT CCAAGGGGCA GGCGGCCGAG 2280
AGAANNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2340
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2400
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2460
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2520
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2580
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2640
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2700
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2760
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2820
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2880
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2940
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 3000
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 3060
NNNNNNNNNN NNNNNCGTGA CGAGCCCTCA GATGCCCAGA ACAGTGATGC CCTCTCCACG 3120
TCCAGCGACC TGTTTGACCT CCTGCTGCGC GAGGACCTCT GCTCGGCCGC GGGCTCCGCC 3180
ACCTCTGACT CCCTGGGCTC CAGCTCTCTG GGCTGTGACG TGTCCAGAAG TGGGACAGGC 3240
AGTAGCGACA CAGGTCACAC CAGCAAGTAT TTCGGAAGCA TTGACTCCTC AGAGAACAAT 3300
CACAAAGCGA AAGTGAAGAC AGACATGGAC GAAAGTGAGC ACTTCGTCAA GTACGTCCTG 3360
CAAGACCCCA TCTGGCTGCT GATGGCCGAC ACGGACGACA GCGTCATGAT GACCTACCAG 3420
ATGCCTTCCC GAAATTTGGA AGCGGTTCTG AACGAGGACA GAGAGAAGCT GATGCTGCTG 3480
CAGAAGCTGC AGCCCTTCAC GGAGGGTCAG AAGCAGGAGA GAGTGCACCC GTGGGTGCNN 3540
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNGAATGTG TTTACTGTGA AAGCAAGGGA 3600
AAAGGTGACA TTTGTGTGCC ATATGAAGAG GACAGCCCTG CTCTGGGACT TGGTGAAGTG 3660
GCAGGCACCA AAGAAGAGGA AAATGGACCC CCCTCGAGTC ATGAGAATGG AGAGCAGACG 3720
TAA 3723
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-EqC-020992Equus caballus74.36 0.00e+00 1008.8
CGD-HoS-021036Homo sapiens (Human)68.38 0.00e+00 1022.7
CGD-MuM-021066Mus musculus (Mouse)65.5 0.00e+00 960.3
CGD-RaN-022186Rattus norvegicus64.34 0.00e+00 941.8
Gene Ontology

GO:0005515--protein binding
GO:0006355--regulation of transcription, DNA-templated
GO:0005654--nucleoplasm
GO:0005634--nucleus
GO:0005737--cytoplasm