CGDB Gene Information


Tag Content
CGDB ID CGD-BoT-071185
Ensembl Accession ENSBTAP00000055391.1
Ensembl Information ENSBTAG00000045685.1 ; ENSBTAT00000063277.1
Organism Bos taurus
NCBI Taxa ID 9913
Circadian Information
Phase Amplitude
(FOLD)
Tissue/Cell Evidence
Peak Trough External
condition
ZT 12 ZT 0 LD >10 Predicted from orthologs Q65ZG8
CT 4 CT 12 DD2 27 aortic smooth muscle cells Predicted from orthologs O15055
ZT 4 ZT 21 LD 5 human HaCaT keratinocytes Predicted from orthologs O15055
ZT 1 ZT 19 LD 2.67 human hair follicle cells Predicted from orthologs O15055
CT 12 CT 0 LL1 3.43 oral mucosa Predicted from orthologs O15055
CT 3 CT 15 DD2 5 U2OS cells Predicted from orthologs O15055
CT 6 CT 18 DD1 4 SCN Predicted from orthologs O54943
CT 9 CT 3 DD1 3 eye Predicted from orthologs O54943
ZT 19 ZT 7 LD 2.5 amygdala Predicted from orthologs O54943
ZT 12 ZT 4 LD 2 bone Predicted from orthologs O54943
ZT 13 ZT 5 LD 2.4 bone marrow Predicted from orthologs O54943
ZT 18 ZT 6 LD 1.89 brain Predicted from orthologs O54943
ZT 15 ZT 23 LD 3 cortex Predicted from orthologs O54943
ZT 13 ZT 2 LD 10 heart Predicted from orthologs O54943
ZT 13 ZT 1 LD 2.5 hippocampus Predicted from orthologs O54943
ZT 16 ZT 0 LD 25 jejunum Predicted from orthologs O54943
ZT 15 ZT 23 LD 6 kidney Predicted from orthologs O54943
CT 15 CT 3 DD1 4 liver Predicted from orthologs O54943
ZT 16 ZT 4 LD 7 liver Predicted from orthologs O54943
CT 18 CT 6 DD2 10 MEFs Predicted from orthologs O54943
ZT 17 ZT 1 LD 6 megakaryocytes Predicted from orthologs O54943
ZT 18 ZT 6 LD 3 n primary visualcortex (V1) Predicted from orthologs O54943
CT 0 CT 12 DD2 10 NIH-3T3 cells Predicted from orthologs O54943
CT 12 CT 0 DD3 4.79 ovary Predicted from orthologs O54943
ZT 12 ZT 4 LD 5 pituitary gland Predicted from orthologs O54943
CT 12 CT 20 DD3 5 retina Predicted from orthologs O54943
ZT 12 ZT 16 LD 5 retina Predicted from orthologs O54943
CT 12 CT 20 DD3 6 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
ZT 0 ZT 16 LD 2 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
CT 9 CT 21 DD1 6 SCN Predicted from orthologs O54943
CT 8 CT 16 DD1 20 SCN Predicted from orthologs O54943
CT 15 CT 3 DD1 3 skeletal muscle Predicted from orthologs O54943
CT 14 CT 2 DD3 12 suprachiasmatic nucleus (SCN) Predicted from orthologs O54943
ZT 16 ZT 4 LD 9 abdominal adipose tissue Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 anterior cingulate Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 2.05 area postrema Predicted from orthologs Q9Z301
ZT 18 ZT 2 LD 6.38 AV3V Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 14 basolateral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 10 ZT 6 LD 2 caudal ventrolateral medulla Predicted from orthologs Q9Z301
CT 12 CT 8 DD17 4.35 colon Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 3.29 dorsal vagal motor nucleus Predicted from orthologs Q9Z301
ZT 2 ZT 14 LD 1.8 dorsomedial nucleus Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 5.5 entral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 5.7 heart Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 15 hippocampus Predicted from orthologs Q9Z301
ZT 16 ZT 3 LD 57 intestinal jejunal mucosa Predicted from orthologs Q9Z301
CT 16 CT 4 DD17 5 liver Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 8.5 liver Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q9Z301
ZT 0 ZT 12 LD 7 nucleus accumbens shell Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.07 nucleus ambiguus Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.63 paraventricular nucleus Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 4 prefrontal cortex Predicted from orthologs Q9Z301
ZT 12 ZT 8 LD 2.5 PVN Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 rostral agranular insula Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 3.92 SCN Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
Descriptiongene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G3N0M5](View all)
Protein Sequence
(Fasta)
MDGCADHTPS PSAPSKEPAE PWASQAALQE DVDMSGGSSG NETSENGSTG RDSQGSDCGD 60
SGRELGLLVG PPGSLQGPET FGLMMAKSEH HLSTSGCSSE QSTKADAHKE LIKTLKELKV 120
HLPADRKAKG KASTLATLKY ALRSVKQVKA NEEYYQLLMS SENHPCRTHV PSYTVHEIEG 180
ITSEFIMKNV DMFVAAVSLV TGKTLYISDQ VASIFHCKRD AFYNAKFVEF LAPHDVSVFH 240
SSTTPYKLPP WSDRRQADSF TQECMEEKSF FCRVSVGKSH ESEIHYHPFR MTPYLAQVCE 300
RQGAESQLCC VLLAERVHSG YEAPRIPPEK RIFTTTHSPN CLFQDVDQRA VPLLGYLPQD 360
LIETPVLVQL HPSDRPLMLA IHKKIVQSGG QPFDYSPLRF RARNGEYITL DTSWSSFINP 420
WSRKISFIIG RHRVRLGPLN EDVFSAPPGL EEKAPQPGVQ ELTEQIHRLL LQPVPHSGSS 480
GYGSLGSNGS HEHLMSQTSS SDSTGQEDPR RRRAETCKNG NKAKSKSHYP DESGEQKSNP 540
AS 542
Nucleotide Sequence
(Fasta)
ATGGATGGCT GCGCCGACCA CACGCCCAGC CCCAGCGCCC CATCCAAGGA GCCCGCAGAG 60
CCCTGGGCCA GCCAAGCTGC CCTCCAGGAG GACGTGGACA TGAGCGGTGG CTCAAGCGGG 120
AACGAGACCA GTGAGAACGG CTCGACGGGG CGGGACTCGC AGGGCAGCGA CTGTGGCGAC 180
AGCGGCCGGG AGCTGGGGCT GCTGGTGGGG CCACCGGGCT CTCTCCAGGG TCCAGAAACC 240
TTTGGCCTAA TGATGGCGAA GTCTGAACAC CACCTGTCCA CCAGTGGCTG CAGCAGCGAG 300
CAGTCCACCA AAGCCGATGC CCACAAAGAG CTCATCAAAA CGCTGAAGGA GCTGAAGGTC 360
CACCTCCCCG CGGACAGGAA GGCCAAGGGG AAGGCCAGCA CCTTGGCGAC CCTCAAGTAC 420
GCCCTGAGGA GCGTGAAGCA GGTGAAAGCC AATGAGGAGT ACTACCAGCT GCTGATGTCC 480
AGCGAGAACC ACCCTTGCAG AACCCACGTG CCCTCCTACA CCGTGCACGA GATTGAGGGC 540
ATCACCTCCG AGTTCATCAT GAAGAACGTG GACATGTTCG TGGCCGCTGT GTCCCTGGTG 600
ACCGGGAAGA CCCTGTACAT CTCTGACCAA GTGGCCTCCA TCTTTCACTG CAAGAGGGAC 660
GCCTTCTACA ACGCCAAGTT TGTGGAGTTC TTGGCGCCCC ATGACGTGAG CGTGTTCCAT 720
AGCTCCACCA CACCGTACAA GCTGCCGCCC TGGAGTGACC GCCGCCAAGC AGACTCTTTT 780
ACTCAAGAAT GCATGGAGGA GAAGTCTTTC TTCTGCCGAG TCAGCGTCGG CAAAAGCCAC 840
GAGAGCGAGA TCCACTACCA CCCGTTCCGC ATGACGCCCT ACCTGGCCCA GGTGTGCGAG 900
CGGCAGGGCG CCGAGAGCCA GCTGTGCTGC GTGCTGCTGG CAGAGAGAGT GCACTCGGGC 960
TACGAAGCCC CTAGAATCCC TCCTGAAAAG AGAATTTTTA CAACCACACA TTCGCCAAAT 1020
TGTCTGTTCC AGGACGTGGA CCAAAGGGCC GTCCCTCTCC TGGGCTACCT GCCCCAGGAC 1080
CTGATTGAGA CACCTGTGCT CGTGCAGCTG CACCCCAGCG ACAGGCCCCT GATGCTCGCC 1140
ATCCACAAGA AGATTGTGCA GTCCGGGGGC CAGCCCTTCG ACTACTCCCC TCTCCGGTTC 1200
CGCGCCCGAA ACGGGGAGTA CATCACGCTG GACACCAGCT GGTCCAGCTT CATCAATCCC 1260
TGGAGCAGGA AGATCTCCTT CATCATTGGG AGGCACAGAG TGAGGCTGGG GCCTCTGAAC 1320
GAGGACGTGT TCTCTGCCCC GCCGGGTCTG GAGGAAAAGG CCCCGCAGCC CGGTGTCCAG 1380
GAGCTCACAG AGCAGATCCA CCGGCTGCTG CTGCAGCCCG TGCCCCACAG CGGCTCCAGC 1440
GGCTACGGGA GCCTGGGCAG CAACGGGTCC CACGAGCATC TCATGAGCCA GACCTCCTCC 1500
AGCGACAGCA CCGGCCAGGA GGACCCCCGC CGGAGGAGAG CCGAAACTTG TAAAAATGGT 1560
AACAAGGCCA AAAGCAAAAG TCACTACCCT GATGAATCTG GAGAACAAAA GAGCAACCCT 1620
GCTTCAGGTA CCAAA 1635
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-CaE-021686Caenorhabditis elegans28.26 2.30e-17 87.43
CGD-HoS-021036Homo sapiens (Human)79.34 0.00e+00 825.9
CGD-MuM-021066Mus musculus (Mouse)75.29 0.00e+00 774.2
CGD-RaN-022186Rattus norvegicus75.1 0.00e+00 773.1