CGDB Gene Information


Tag Content
CGDB ID CGD-PoF-055598
Ensembl Accession ENSPFOP00000006363.2
Protein Name PER2 (1 of many)
Ensembl Information ENSPFOG00000006138; ENSPFOT00000006374
Organism Poecilia formosa
NCBI Taxa ID 48698
Circadian Information
Phase Amplitude
(FOLD)
Tissue/Cell Evidence
Peak Trough External
condition
CT 4 CT 12 DD2 27 aortic smooth muscle cells Predicted from orthologs O15055
ZT 4 ZT 21 LD 5 human HaCaT keratinocytes Predicted from orthologs O15055
ZT 1 ZT 19 LD 2.67 human hair follicle cells Predicted from orthologs O15055
CT 12 CT 0 LL1 3.43 oral mucosa Predicted from orthologs O15055
CT 3 CT 15 DD2 5 U2OS cells Predicted from orthologs O15055
CT 6 CT 18 DD1 4 SCN Predicted from orthologs O54943
CT 9 CT 3 DD1 3 eye Predicted from orthologs O54943
ZT 19 ZT 7 LD 2.5 amygdala Predicted from orthologs O54943
ZT 12 ZT 4 LD 2 bone Predicted from orthologs O54943
ZT 13 ZT 5 LD 2.4 bone marrow Predicted from orthologs O54943
ZT 18 ZT 6 LD 1.89 brain Predicted from orthologs O54943
ZT 15 ZT 23 LD 3 cortex Predicted from orthologs O54943
ZT 13 ZT 2 LD 10 heart Predicted from orthologs O54943
ZT 13 ZT 1 LD 2.5 hippocampus Predicted from orthologs O54943
ZT 16 ZT 0 LD 25 jejunum Predicted from orthologs O54943
ZT 15 ZT 23 LD 6 kidney Predicted from orthologs O54943
CT 15 CT 3 DD1 4 liver Predicted from orthologs O54943
ZT 16 ZT 4 LD 7 liver Predicted from orthologs O54943
CT 18 CT 6 DD2 10 MEFs Predicted from orthologs O54943
ZT 17 ZT 1 LD 6 megakaryocytes Predicted from orthologs O54943
ZT 18 ZT 6 LD 3 n primary visualcortex (V1) Predicted from orthologs O54943
CT 0 CT 12 DD2 10 NIH-3T3 cells Predicted from orthologs O54943
CT 12 CT 0 DD3 4.79 ovary Predicted from orthologs O54943
ZT 12 ZT 4 LD 5 pituitary gland Predicted from orthologs O54943
CT 12 CT 20 DD3 5 retina Predicted from orthologs O54943
ZT 12 ZT 16 LD 5 retina Predicted from orthologs O54943
CT 12 CT 20 DD3 6 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
ZT 0 ZT 16 LD 2 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
CT 9 CT 21 DD1 6 SCN Predicted from orthologs O54943
CT 8 CT 16 DD1 20 SCN Predicted from orthologs O54943
CT 15 CT 3 DD1 3 skeletal muscle Predicted from orthologs O54943
CT 14 CT 2 DD3 12 suprachiasmatic nucleus (SCN) Predicted from orthologs O54943
Descriptionperiod circadian clock 2 [Source:HGNC Symbol;Acc:HGNC:8846](View all)
Protein Sequence
(Fasta)
MSEDSNPKLY RFSTLDGCEQ NREDQRPRRG SMSKLHRMAS SYSDGCGRQD RVELGSELGL 60
ASEGSDSSHE HPACLGSPHD DRKRQRTPLH EDVEMGGSGW SGSGTESHGN ESHGNESHGN 120
GSVGSSNGNG KDSALMESSG SNKSSNSHSP SPPSSSNAFS LMSSEQDNPS TSGCSSEQSA 180
KAKTQKELFK TLKELKMHLP PEKRSKGKSN TVNTLKYALR CIKQVKANEE YYQMLMINDS 240
QPPGFDVSSY TIEEINTITS EYTLKNTDIF AVAVSLITGK IVYISDQAAS ILNCKREVFN 300
NAKFVEFLTP QDVSVFYSFT TPYRLPSWSM CTGAESSPTE CMQEKSFFCR ISGGKEREGD 360
LQYYPFRMTP YLMKVQDAEL SEEQFCCLLL AERVHSGYEA PRIPPDKRIF TTTHTPNCVF 420
QDVDERAVPL LGYLPQDLIG TPILLNLHPS DRPLMLAVHR RILQCAGQPF DHSSIRFCAR 480
NGEYITIDTS WSSFVNPWSR KVSFVIGRHK VRMGPVNEDV FAAPAFHGGK MMDSDIQEIS 540
EQIHRLLLQP VHNVGSSGYG SYGSNGSHEQ QVSISSSSES NGNIPVGNTA EETSKTKPSR 600
TFQEICKGVH MLKNHDSQVC MRSSSVWQPK TEQRKTGDGS SAAQRSSGVR VRDSAPPSQV 660
RDNTGTNMDD FICKDQTVCS YQQISCLDSV IRYLESCNVP ITVKRKYQFS SNTTSSNSDD 720
DKRGSEDGMQ VPQGTHPDPL MLDTQPGLSN MKAPKKPPTG AAAVVGGTLA PLTLPSKAES 780
VVSITSQCSY SSTIVHVGDK KPQPESEIIE DVAESPAPPA VPVSMVSPPS QEKEAYKRLG 840
LTKEVLAAHT QKEEQAFLNR CRELHNARSF QKECSSCLHN QRGLTNAEDS AGQQGVAKQG 900
PTRPETTTKK CNRNRKSKKP RMKHPDSSDS AVSNRKPRPP LQGLNQTSWS PSEASQSAFN 960
VSYPTMVPAY PLYPPTPAAP AQGSRPDASQ SSAFGEGQNA QAPPTSTPFP PPIVTPVVAL 1020
VLPNYLFPHM GQLNQMSQLC ATPRPTLFTE QSQPPPTYST QQAFQTPPAA YPMQTQLSFT 1080
PQQPFPVQTA FSPQHLFQAA QAPYATQQPF TAQPSFPVQT PFVAQTPYPA QPFPYTIASE 1140
PPKTLTAEPR EGAASRSSTP ASAAREPTTS PPLFESRCSS PLQLNLLSME EGQRSLERQD 1200
STAVQAGGPG SGAAVVSGAT GDKGGAATKT DNHQQLEPRG RGAHSDGNSS SCDLLDILLQ 1260
EQEDAHSGTG SATSGSMGSG LGSGSTSGSG SNDCRTSASG ASGSRTGSSN TSKYFGSIDS 1320
LEHDLKEKGK MRSEGGSESS KSQPKVSAQG EGEHLIKYVL QEPLWLLMAN ADDKVMMTYQ 1380
MPSRDIQRVL REDKERLRQM QKSQPHFTSE QRRELVEEHP WMRRGGLPAA INVKECVYCE 1440
DAAAGPIEED LPDMDMGELG EDLGRDTERG QSQSEEPKPQ PDPGF 1485
Nucleotide Sequence
(Fasta)
CTGATTGGCT GGTGGGTTGC TGTCTTAGAA AGCCGGGGAG GAACCGACCG CTACCGTGTC 60
AGTCAGTCAG TCTGAAGCTG CTTTCCCATT GAGGAATACT GGTGGCCTTA AACCTATGTT 120
TTTTTCTACT GCAGGTTTGG CTTTTTTTTT TTACCTTGGA CACGAGAGGA AAAGAAATTT 180
TCACATCAAC AGCACAGATT GCACCTCAGC TGCTCATACA TCAACTCTAT TTCCATCCCA 240
ATGCCATGCA CCTCATGGTA TCGCCATGTG GAAAGTAACC TAGTCTTGCA TTTCCTGCCA 300
ATTCATGTCT GAGGACAGCA ACCCAAAGCT CTATCGGTTC TCCACTCTGG ACGGCTGCGA 360
ACAGAACCGC GAAGACCAAC GCCCCCGGCG TGGCTCTATG AGCAAACTCC ACCGCATGGC 420
CAGCAGCTAC AGCGACGGTT GCGGCCGGCA GGACCGGGTG GAACTAGGAT CCGAGCTGGG 480
GCTGGCGTCC GAGGGCAGCG ACAGCAGCCA TGAGCACCCA GCGTGTCTCG GCTCCCCGCA 540
CGACGACAGG AAGCGTCAGC GCACGCCTCT CCACGAGGAC GTAGAGATGG GCGGCAGCGG 600
CTGGAGCGGC AGCGGCACAG AATCCCACGG CAACGAATCG CACGGCAATG AGTCCCACGG 660
CAACGGGTCA GTGGGCAGTT CGAATGGCAA CGGGAAGGAT TCTGCTCTGA TGGAGTCGTC 720
GGGGAGCAAC AAGAGCTCCA ACTCTCACAG TCCTTCACCC CCAAGCAGCT CCAACGCCTT 780
CAGCCTGATG AGCTCTGAGC AGGACAACCC TTCAACCAGC GGCTGCAGCA GCGAACAGTC 840
GGCCAAAGCC AAGACTCAGA AGGAGCTCTT CAAGACTCTC AAGGAGCTCA AGATGCACCT 900
GCCTCCAGAA AAGAGGAGTA AGGGCAAATC CAACACTGTG AACACGCTCA AATATGCTTT 960
GCGGTGTATC AAACAGGTGA AAGCTAATGA GGAATACTAC CAGATGCTGA TGATTAATGA 1020
CAGTCAGCCT CCTGGCTTCG ACGTGTCTTC ATACACCATT GAAGAAATTA ACACCATCAC 1080
TTCAGAATAC ACCCTGAAAA ACACAGACAT TTTTGCCGTA GCGGTGTCTC TCATCACCGG 1140
GAAGATTGTT TACATCTCTG ACCAGGCTGC CTCCATACTG AACTGCAAGC GGGAAGTTTT 1200
CAACAACGCC AAGTTTGTGG AGTTCCTGAC GCCTCAGGAC GTCAGCGTGT TCTACAGCTT 1260
CACCACGCCG TACCGCCTGC CCTCGTGGAG CATGTGCACC GGCGCAGAGT CGTCTCCCAC 1320
AGAGTGCATG CAGGAGAAAT CCTTCTTCTG CCGCATCAGT GGTGGGAAGG AGCGTGAGGG 1380
GGATCTGCAG TACTATCCTT TCCGGATGAC TCCGTACCTC ATGAAGGTTC AAGATGCTGA 1440
GCTGTCTGAA GAGCAGTTCT GCTGCCTCCT GCTGGCTGAG AGGGTGCACT CTGGATATGA 1500
AGCTCCCAGG ATTCCTCCAG ATAAACGGAT TTTTACCACC ACACACACTC CTAACTGTGT 1560
GTTCCAGGAT GTCGATGAGA GGGCGGTCCC TCTGCTGGGA TACCTCCCCC AAGACCTGAT 1620
CGGGACACCC ATTCTGCTCA ACCTGCACCC GAGTGACCGG CCTTTAATGC TGGCTGTGCA 1680
TCGCAGAATT CTGCAGTGCG CCGGACAGCC GTTCGATCAT TCCTCGATCC GTTTCTGTGC 1740
GAGAAACGGC GAGTATATCA CCATCGACAC CAGCTGGTCC AGCTTTGTGA ATCCCTGGAG 1800
CCGCAAGGTG TCTTTTGTCA TCGGGAGGCA CAAAGTGCGC ATGGGGCCAG TAAACGAAGA 1860
TGTTTTCGCA GCACCAGCTT TCCACGGAGG GAAAATGATG GATTCAGACA TCCAGGAAAT 1920
TAGCGAGCAG ATCCACAGAC TGCTGCTCCA ACCGGTCCAC AACGTGGGCT CCAGCGGCTA 1980
TGGCAGCTAC GGCAGCAACG GTTCCCACGA GCAACAGGTG AGCATCAGCT CATCCAGCGA 2040
AAGCAACGGG AACATCCCAG TAGGGAACAC GGCGGAGGAG ACGAGTAAGA CCAAACCGTC 2100
CAGGACCTTC CAGGAAATTT GTAAGGGAGT CCACATGCTG AAGAATCATG ACTCTCAGGT 2160
CTGCATGCGC TCCTCGTCGG TGTGGCAGCC CAAAACCGAG CAGAGGAAGA CCGGCGACGG 2220
CTCGTCTGCA GCCCAGAGGA GTTCAGGTGT GCGTGTACGG GACTCCGCCC CCCCCTCACA 2280
GGTCAGAGAC AACACTGGAA CCAACATGGA CGACTTCATC TGCAAAGACC AGACTGTGTG 2340
CTCATACCAG CAGATCAGCT GTCTCGACAG CGTCATTAGG TATCTGGAGA GTTGTAACGT 2400
CCCCATCACA GTGAAAAGGA AGTACCAGTT CTCATCCAAC ACCACGTCGT CCAACTCGGA 2460
TGACGACAAG AGGGGGTCGG AAGATGGTAT GCAAGTGCCT CAGGGGACAC ACCCAGATCC 2520
TTTGATGCTC GACACCCAGC CAGGCTTGTC AAACATGAAA GCACCTAAGA AGCCACCAAC 2580
TGGGGCAGCT GCTGTGGTGG GGGGCACTCT GGCGCCCCTC ACTCTGCCCA GTAAGGCTGA 2640
AAGTGTTGTC TCCATCACCT CACAGTGTAG CTACAGCAGC ACCATCGTTC ATGTGGGAGA 2700
CAAGAAGCCT CAACCAGAGT CTGAGATCAT CGAAGATGTT GCAGAGAGCC CAGCTCCCCC 2760
CGCTGTGCCG GTCAGTATGG TGTCTCCACC CAGCCAGGAG AAGGAGGCCT ACAAGAGGCT 2820
GGGGCTCACG AAGGAGGTTC TGGCAGCCCA CACCCAGAAG GAGGAGCAGG CCTTCCTGAA 2880
CCGCTGCCGA GAGCTCCACA ATGCCAGGAG CTTCCAGAAG GAATGTTCCT CATGTTTGCA 2940
CAACCAGAGA GGCCTGACTA ACGCCGAAGA TTCAGCTGGT CAACAGGGAG TTGCCAAACA 3000
AGGCCCAACC CGGCCAGAGA CGACCACCAA GAAATGCAAC CGCAACAGGA AGTCCAAGAA 3060
ACCGCGGATG AAGCATCCTG ACTCGTCTGA CAGCGCCGTG TCCAATCGCA AACCCCGGCC 3120
CCCTCTTCAG GGTCTCAACC AGACGTCTTG GTCCCCGTCT GAAGCATCCC AGTCAGCTTT 3180
TAACGTCTCC TACCCCACCA TGGTGCCTGC ATATCCGCTG TACCCGCCAA CGCCTGCTGC 3240
GCCAGCTCAG GGGTCCCGCC CCGATGCGTC TCAGTCCTCT GCCTTTGGGG AGGGGCAGAA 3300
CGCCCAAGCC CCCCCCACCA GCACTCCGTT CCCCCCTCCG ATTGTTACAC CGGTGGTGGC 3360
TCTGGTGCTG CCCAACTACC TTTTCCCCCA TATGGGACAG TTGAATCAGA TGAGCCAGCT 3420
CTGCGCCACG CCCAGACCAA CGTTATTCAC AGAGCAGAGC CAGCCCCCAC CGACTTACTC 3480
TACCCAGCAG GCCTTTCAGA CGCCACCGGC GGCGTACCCA ATGCAGACCC AGCTCTCCTT 3540
CACCCCCCAG CAGCCATTCC CAGTGCAGAC TGCCTTTTCC CCCCAGCACC TGTTTCAAGC 3600
TGCGCAGGCC CCCTACGCTA CCCAGCAGCC CTTCACCGCC CAGCCGTCTT TCCCAGTGCA 3660
GACACCCTTT GTGGCTCAAA CCCCCTACCC AGCTCAGCCT TTCCCCTACA CCATAGCCTC 3720
CGAGCCCCCC AAAACTCTCA CAGCAGAGCC CAGAGAAGGG GCGGCTTCTC GCTCCTCCAC 3780
CCCCGCCTCG GCGGCCCGGG AGCCCACCAC TTCCCCTCCC CTGTTTGAGT CGCGCTGCAG 3840
CTCCCCGCTG CAACTCAACC TGCTGAGCAT GGAGGAGGGG CAGCGCTCAC TGGAGCGGCA 3900
GGACAGCACC GCAGTCCAGG CTGGGGGTCC AGGCAGTGGG GCAGCAGTTG TGTCGGGGGC 3960
AACAGGAGAC AAGGGTGGAG CTGCAACCAA GACTGATAAT CACCAACAGC TGGAACCCAG 4020
AGGCAGAGGG GCTCACAGCG ATGGCAACTC CTCGTCCTGT GACCTTCTGG ACATCCTGTT 4080
ACAGGAGCAG GAGGACGCTC ACTCCGGCAC CGGGTCAGCC ACCTCAGGTT CCATGGGCTC 4140
AGGTCTGGGT TCAGGTTCGA CATCAGGCTC CGGATCCAAC GACTGTCGGA CCTCAGCTAG 4200
TGGAGCGTCT GGCAGCAGAA CAGGAAGCAG CAACACCAGC AAGTACTTCG GCAGCATCGA 4260
CTCTCTGGAG CACGACCTGA AGGAAAAAGG CAAGATGAGG AGCGAAGGCG GCTCGGAGAG 4320
CAGCAAGTCT CAGCCCAAAG TGTCCGCTCA GGGGGAAGGG GAACATTTAA TCAAATACGT 4380
TCTGCAGGAG CCTCTTTGGT TGCTCATGGC CAACGCTGAC GACAAGGTCA TGATGACATA 4440
TCAAATGCCA TCCAGGGACA TTCAGAGGGT TCTGAGAGAA GACAAGGAGA GGCTGCGACA 4500
GATGCAGAAG AGTCAGCCTC ACTTCACCTC AGAGCAGCGG CGGGAGCTGG TGGAGGAGCA 4560
TCCCTGGATG AGGAGAGGAG GCCTCCCCGC AGCTATCAAT GTGAAGGAGT GTGTGTACTG 4620
TGAGGACGCT GCTGCTGGAC CCATAGAGGA GGATCTACCC GACATGGACA TGGGCGAACT 4680
GGGCGAGGAT CTGGGCAGAG ACACTGAGAG AGGCCAGAGC CAATCAGAGG AGCCCAAACC 4740
TCAGCCGGAC CCTGGCTTCT GAGGGGCCAA CGAGGGGCGG GGCCACTATG GTTCATGGAC 4800
CTTTTTAGGA ATATACACAC ACTGGACGTG CCTAAAACAC ACACACACAA CAAGAAGAAG 4860
AGCTCAGTGT GGCCACTGTG ATTCTCAAAG AGGTGTGCCA GTTGTGTGTG TGTGTGTGTG 4920
TGTGGATGTT GGACCGTGCA CAATGGCAGT TCCTCATTCC CCCCACATGG GGGGGTAGTA 4980
GAGCTTTATA AGAGTTTTGT AGCTGGGACC TACCTATAGT ATTTTTTCTG TTTCACACAC 5040
ACAAACACAC AGTCTCTACA AAAAAAATCT GTCTCATTTT TTATTGAAAC ATTTTCCTGT 5100
CTTTTGTCAA ACACAGGGCA TTTATTCTGA TACAGGTGAA ACTGATGCTT AGTAATATAT 5160
AAAATTTTTA AAGATGTTAT TTTTACAAAA CAAAAAAAAG TAACTAAAAA AAAACAAAAA 5220
TCCTGTGAAG CTCCACAGCA TTCCTGTTAT GATGCTGTGC TGCTCCACGT CCTGTTTGTG 5280
CTTTCCTTCA GACCCCTTCC CATCAGGATT TATGAGAAAC AGTCGACCTT CGTTGGTTTT 5340
TGTGAGCTGC GAGTCTCACA GTTGTGTGTC ATGAATAAAT TAAGATTTTT CTACATTCTT 5400
TGGACCTGAG CGTGTGAAGT ATGAATGTGT ACAGCAGTAT TAGCACTTGA CTCAAGAGGA 5460
CGATTGGTGG GCTGAGTGAA ACTCGCCTCA GTGGTGACAA TCTGATACAG AGATGATATT 5520
TATTAAAAGA ATACTATTAT TTTTGGTAGG TGGTAGATCC AAAATAAATT TTAAGCTACA 5580
GCCAAATTAA TACTACTATG AGATAATATA TTAACCTCTT AAGTATGATT GTAAGCACTA 5640
CGGATTGTTT AACTTTGACG CTGAAGCTCA CTCCGTTCAG CGAGAGTTGT CACAGCTTGA 5700
AAAGCTGCCA AAAAATATGT TTGCAATTAG AAACAATCAG CATCTGAAAA ACGATGCTTT 5760
TAAATAAAGG TTTTAAAGAA AGAGGGTCAG TTTACAGGTG AATTTTTTAA AAGTTATATT 5820
TGTGCAAACT CTCAGCCTAC AGCGAAAATT CTTGAGTAAT TTTTTCGTCA TGTTTAAGTG 5880
ATGCATCACT ACAACACTGT GTAAAACAAA GAGGTGGGAG GTTTGGCGTT ATGCACAGCG 5940
ATCTCAGTTC AAAACTCCCG GCTGTCTTTC TCCAAACTGA TTCTAATTAA TGCTATTGTG 6000
ATTTGGCGTG TGCATGTTGC AATTTAGCTA ACTGAGTTCT TTGAGAGCTG CAGTTCAGAT 6060
CAGTGTTTGA CTTTGAGCTG GTGGGAAAAC ATGAACAAGC GTAGCAAATC AGAGGGGCGC 6120
ATTTCCCTCA CGGGAGCCGC TCCTCTCTCC ATCGTTTAAC AGGAAGTCAT AGGAAACTGT 6180
GAGCCACGCA GCTGGAGCAG TAATGGGACC CGGGAACAAC TTTGGTGCTA CAATTCAGAA 6240
CAGCTGGGGG CCTGTGAATG TTACACAGAC TTGGACCAAT AGCTTTGTTC ATGTTTCTTC 6300
AGTTAATTTT CTTATTCTGT TCTTTTTTTT TTATCATCCT ACTTTTCTAT TTTCCTTGTG 6360
CGCGTTTGAG TTTTTTTTTT TATGTGTGTG TGTGTGTCGA CGAAGGTAAA AGCTTTTGGA 6420
GCATCACCAG GGACGTACCC TACCTCTAAG TAAATCCTAG GTTACTGTAA GCAGATGATA 6480
GGATGTGTGT GAATGTGGAG AACAGAGCGA TGAGTGATTC ATGTTAAGAG TCTCTGAACA 6540
TGTGTTTGGA CCCCATCCTT CTTTCCCACT GAGTTGACGC ACAGAAAATA CTAGCAACCA 6600
TGGCAACCAC ACTGTCTCTG TCTCTTTATT GTTAATTTAT TTCTGTTTGG TTTATTTCTA 6660
AAGGGGCCCT CCAACATGTA CCTGTTTGTG AAGAATGCAG GAACATCAGA AGAAACATGA 6720
GAAATGAAGC TGTTCAGTAT CTGGTTGATT GTCGGGGCCC TGCTCCCTTT GCTCTGTAAA 6780
TGCACACATG TGGTACCTGA ACACAATGAT GTTTATAGAG TTTTCCGTAT ATTAAATTAG 6840
CACAGTTCTT TGCATTTTTG TAGCTGAAAA GTTCGAATGT TGAAAACTTG TAATAAAACT 6900
ACAGTAATGG AACCGTTGTG ACTTTTTTTA TTTTTAGTTT CATGTTGTCA TTGCTCAGCT 6960
CATCTCTAAC TATAAGCAG 6979
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-HoS-021036Homo sapiens (Human)51.69 0.00e+00 773.5
CGD-MuM-021066Mus musculus (Mouse)40.38 0.00e+00 849.4
Gene Ontology

GO:0005515--protein binding
GO:0006355--regulation of transcription, DNA-templated