CGDB Gene Information

Tag Content
CGDB ID CGD-GaM-045447
Ensembl Accession ENSGMOP00000015053.1
Protein Name PER2 (1 of many)
Ensembl Information ENSGMOG00000014046; ENSGMOT00000015440
Organism Gadus morhua
NCBI Taxa ID 8049
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 6 ZT 18 LD 5 skeletal muscle Predicted from orthologs F6ZZH0
ZT 21 ZT 9 LD 6 duodenum Predicted from orthologs Q8QGQ8
ZT 2 ZT 18 LD 3.17 embryos Predicted from orthologs Q8QGQ8
ZT 6 ZT 18 LD 8 embryos Predicted from orthologs Q8QGQ8
CT 12 CT 0 DD1 3 granulosa cells Predicted from orthologs Q8QGQ8
ZT 3 ZT 18 LD 84.29 pineal glands Predicted from orthologs Q8QGQ8
ZT 23 ZT 11 LD 2.25 spleen Predicted from orthologs Q8QGQ8
CT 4 CT 12 DD2 27 aortic smooth muscle cells Predicted from orthologs O15055
ZT 4 ZT 21 LD 5 human HaCaT keratinocytes Predicted from orthologs O15055
ZT 1 ZT 19 LD 2.67 human hair follicle cells Predicted from orthologs O15055
CT 12 CT 0 LL1 3.43 oral mucosa Predicted from orthologs O15055
CT 3 CT 15 DD2 5 U2OS cells Predicted from orthologs O15055
CT 6 CT 18 DD1 4 SCN Predicted from orthologs O54943
CT 9 CT 3 DD1 3 eye Predicted from orthologs O54943
ZT 19 ZT 7 LD 2.5 amygdala Predicted from orthologs O54943
ZT 12 ZT 4 LD 2 bone Predicted from orthologs O54943
ZT 13 ZT 5 LD 2.4 bone marrow Predicted from orthologs O54943
ZT 18 ZT 6 LD 1.89 brain Predicted from orthologs O54943
ZT 15 ZT 23 LD 3 cortex Predicted from orthologs O54943
ZT 13 ZT 2 LD 10 heart Predicted from orthologs O54943
ZT 13 ZT 1 LD 2.5 hippocampus Predicted from orthologs O54943
ZT 16 ZT 0 LD 25 jejunum Predicted from orthologs O54943
ZT 15 ZT 23 LD 6 kidney Predicted from orthologs O54943
CT 15 CT 3 DD1 4 liver Predicted from orthologs O54943
ZT 16 ZT 4 LD 7 liver Predicted from orthologs O54943
CT 18 CT 6 DD2 10 MEFs Predicted from orthologs O54943
ZT 17 ZT 1 LD 6 megakaryocytes Predicted from orthologs O54943
ZT 18 ZT 6 LD 3 n primary visualcortex (V1) Predicted from orthologs O54943
CT 0 CT 12 DD2 10 NIH-3T3 cells Predicted from orthologs O54943
CT 12 CT 0 DD3 4.79 ovary Predicted from orthologs O54943
ZT 12 ZT 4 LD 5 pituitary gland Predicted from orthologs O54943
CT 12 CT 20 DD3 5 retina Predicted from orthologs O54943
ZT 12 ZT 16 LD 5 retina Predicted from orthologs O54943
CT 12 CT 20 DD3 6 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
ZT 0 ZT 16 LD 2 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
CT 9 CT 21 DD1 6 SCN Predicted from orthologs O54943
CT 8 CT 16 DD1 20 SCN Predicted from orthologs O54943
CT 15 CT 3 DD1 3 skeletal muscle Predicted from orthologs O54943
CT 14 CT 2 DD3 12 suprachiasmatic nucleus (SCN) Predicted from orthologs O54943
ZT 16 ZT 4 LD 9 abdominal adipose tissue Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 anterior cingulate Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 2.05 area postrema Predicted from orthologs Q9Z301
ZT 18 ZT 2 LD 6.38 AV3V Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 14 basolateral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 10 ZT 6 LD 2 caudal ventrolateral medulla Predicted from orthologs Q9Z301
CT 12 CT 8 DD17 4.35 colon Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 3.29 dorsal vagal motor nucleus Predicted from orthologs Q9Z301
ZT 2 ZT 14 LD 1.8 dorsomedial nucleus Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 5.5 entral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 5.7 heart Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 15 hippocampus Predicted from orthologs Q9Z301
ZT 16 ZT 3 LD 57 intestinal jejunal mucosa Predicted from orthologs Q9Z301
CT 16 CT 4 DD17 5 liver Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 8.5 liver Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q9Z301
ZT 0 ZT 12 LD 7 nucleus accumbens shell Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.07 nucleus ambiguus Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.63 paraventricular nucleus Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 4 prefrontal cortex Predicted from orthologs Q9Z301
ZT 12 ZT 8 LD 2.5 PVN Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 rostral agranular insula Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 3.92 SCN Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
Descriptionperiod circadian clock 2 [Source:HGNC Symbol;Acc:HGNC:8846](View all)
Protein Sequence
(Fasta)		 SSGNGKDSAL TETSESNKRS SNSHSPSPPS SSTAFSLLSS EQDHPSTSGC SSEQSAKAKT 60
QKELFKTLKD LKMHLPSEKR SKGKSSTLNT LKYALRCIKQ VKANEEYYQM LMINDSQPPG 120
PDVSSYTIEE INSITSEYTL KNTDIFAVAV SLITGRIVYI SDQAAAILNC KREVFHNAKF 180
VEFLTPQDVG VFYSFTTPYR LPSWSTCTGA ESSPTECMQE KSFFCRISGG KEREGALRYY 240
PFRMTPYLMK VQDAQLAEDQ LCCLLLAERV HSGYEAPRIP ADKRIFTTTH TPNCVFQDVD 300
ERAIPLLGYL PQDLIGTPVL LNLHPSDRPL MLAVHKKILQ FAGQPFDHSS TRFRAKNGEY 360
VTIDTSWSSF VNPWSRKVSF VIGRHKVRMG PVNEDVFDAP AFHGGKIMDS DIQEISEQVH 420
RALLQPVHHM GSSGYGSHGS KGSHEQLLSA GSTSDSAGAL AGGPATATEE ETARAKPRTF 480
QEICKGVTML KNQDPQVCLQ PPAPWTPRPE QRLKAADGEW QSTDESPGPS EPGASMEDLP 540
CKDQSVYSYQ QISCLDSVIR YLENCNTPGT VKRKYQFSSH TPSSSDEEKK GSENGFQGPH 600
DTHQGSTLAQ GPPSRAPRSL AALPLACKAE SVVSITSQCS YSSTIVHVGD KKLQPESEII 660
EDVVESPAPP PPPASVVESP PSQEKEAYRR LGLTKQVLAA HTQKEEQAFL GDAHTFQKDC 720
STYLHRHRRA TNAEERHTRP WFRVTRSRVP AAPARSACPE TSLSGGFAEV QSSQAPPTAT 780
PFAAPIVAPV VTLVLPNYLF PQMAPXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 840
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXSPEDEAQ 900
SDASSSDLLD LLLQEDSRSG TGSASSGSMG SGSGGQAPGR LSTGSRNTSK YFGSVDSLGP 960
DLQEPLWFLG ANTGDKVMMT YQMPSRDIQK VLREDKERLR LMQKSQPCFS SEQWRELVED 1020
HPWMRRGGLP STINVKECVY CEDTATHPSA EEDHPEMDLG DRVEEKGRQ 1069
Nucleotide Sequence
(Fasta)		 TCCAGCGGAA ACGGCAAAGA CTCCGCCCTG ACAGAGACTT CAGAAAGCAA CAAGCGCAGC 60
TCCAACTCCC ACAGCCCGTC TCCGCCCAGC AGCTCCACCG CCTTCAGCCT GCTGAGCTCT 120
GAACAGGACC ACCCGTCCAC CAGCGGCTGC AGTAGCGAAC AGTCGGCCAA AGCCAAGACG 180
CAGAAGGAGC TGTTCAAGAC GCTGAAGGAC CTGAAGATGC ACCTGCCGTC TGAGAAGAGG 240
AGCAAGGGGA AGTCCAGCAC GCTCAACACG CTGAAGTACG CGCTGCGATG CATCAAGCAG 300
GTCAAAGCCA ACGAGGAGTA CTACCAGATG CTGATGATCA ACGACAGCCA GCCCCCCGGG 360
CCTGACGTTT CATCTTACAC CATCGAGGAG ATCAACAGCA TCACCTCGGA GTACACACTG 420
AAGAACACGG ATATCTTCGC GGTGGCGGTG TCGCTCATCA CAGGGAGGAT CGTGTACATC 480
TCGGACCAGG CGGCCGCCAT CCTCAACTGC AAGCGGGAGG TGTTCCACAA CGCCAAGTTC 540
GTGGAGTTCC TGACGCCGCA GGACGTGGGC GTGTTCTACA GCTTCACCAC GCCGTACCGC 600
CTCCCCTCGT GGAGCACGTG CACCGGTGCA GAGTCGTCTC CCACAGAGTG TATGCAGGAG 660
AAGTCCTTCT TCTGCCGCAT TAGTGGGGGT AAGGAGCGCG AGGGGGCCCT GCGCTACTAC 720
CCGTTCCGCA TGACGCCCTA CCTGATGAAG GTGCAGGATG CCCAGCTGGC TGAGGACCAG 780
CTCTGCTGCC TCCTGCTGGC CGAGAGGGTG CACTCCGGCT ACGAAGCGCC ACGAATCCCT 840
GCCGACAAGC GCATCTTCAC CACCACACAC ACGCCCAACT GTGTGTTCCA GGACGTGGAT 900
GAGAGGGCCA TCCCTCTGCT TGGCTACCTG CCCCAGGACC TGATCGGGAC CCCCGTGTTG 960
CTCAACCTGC ACCCCAGCGA CCGGCCTCTC ATGTTGGCTG TACATAAAAA GATCCTGCAG 1020
TTCGCCGGCC AGCCCTTCGA CCACTCGTCC ACGCGCTTCC GCGCCAAGAA TGGCGAGTAC 1080
GTGACCATCG ACACCAGCTG GTCCAGCTTC GTCAACCCCT GGAGCCGCAA GGTGTCCTTT 1140
GTGATCGGCC GCCATAAAGT CCGCATGGGT CCCGTGAATG AGGACGTGTT TGATGCACCG 1200
GCGTTCCACG GAGGAAAGAT CATGGACTCT GACATCCAGG AAATCAGTGA GCAGGTCCAT 1260
CGAGCGCTGC TGCAGCCGGT GCACCACATG GGCTCCAGCG GCTACGGGAG CCACGGGAGC 1320
AAAGGCTCCC ATGAGCAGCT GCTGAGCGCG GGCTCGACCA GCGACAGCGC GGGGGCCCTT 1380
GCTGGAGGCC CCGCCACCGC CACAGAGGAA GAGACGGCGC GGGCCAAGCC GCGCACCTTC 1440
CAGGAGATCT GCAAGGGGGT GACCATGCTG AAGAACCAGG ACCCCCAGGT GTGCCTGCAG 1500
CCACCCGCGC CCTGGACCCC CAGGCCCGAG CAGAGGCTGA AGGCCGCTGA TGGTGAGTGG 1560
CAGTCCACTG ACGAATCCCC TGGTCCGTCT GAACCTGGTG CCAGCATGGA GGACCTCCCC 1620
TGTAAAGACC AGAGCGTTTA CTCCTACCAG CAGATCAGCT GCCTCGACAG TGTCATCAGG 1680
TACCTGGAGA ACTGCAACAC TCCCGGTACG GTGAAGAGGA AGTATCAGTT CTCCTCCCAC 1740
ACCCCCTCCT CCTCCGACGA GGAAAAGAAG GGCTCGGAGA ACGGTTTCCA AGGCCCGCAT 1800
GACACCCACC AAGGTTCAAC GCTCGCCCAG GGCCCCCCTT CAAGGGCCCC AAGAAGCCTG 1860
GCGGCCCTCC CCCTGGCCTG CAAGGCGGAG AGCGTGGTGT CCATCACCTC TCAGTGCAGC 1920
TACAGCAGCA CCATCGTCCA CGTGGGGGAC AAGAAGCTCC AGCCCGAATC TGAGATCATC 1980
GAGGACGTGG TGGAGAGCCC TGCGCCCCCT CCCCCGCCCG CCAGCGTGGT GGAGTCCCCG 2040
CCCAGCCAGG AGAAGGAGGC CTACAGGCGC CTCGGCCTCA CCAAGCAGGT GCTGGCGGCG 2100
CACACCCAGA AGGAGGAGCA GGCCTTCCTC GGCGACGCCC ACACCTTCCA GAAGGACTGC 2160
TCCACCTACC TGCACCGCCA CCGCCGCGCC ACCAACGCCG AAGAGCGTCA TACCCGGCCC 2220
TGGTTCCGGG TTACCCGCTC TCGTGTACCC GCCGCCCCAG CCCGGTCGGC CTGCCCGGAA 2280
ACCTCCCTCT CCGGCGGCTT CGCTGAGGTC CAGAGCAGCC AGGCTCCTCC CACCGCCACG 2340
CCCTTCGCGG CTCCCATCGT GGCGCCTGTG GTGACGCTGG TGCTGCCCAA CTACCTGTTC 2400
CCTCAGATGG CTCCGNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2460
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2520
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2580
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2640
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNT CGCCTGAGGA CGAGGCCCAG 2700
AGCGACGCCT CCTCCAGCGA CCTGCTGGAC CTCCTGCTGC AGGAGGACTC CCGCTCCGGG 2760
ACCGGCTCGG CCAGCTCCGG CTCCATGGGC TCCGGGTCAG GGGGTCAGGC TCCCGGTCGG 2820
CTCTCCACAG GAAGCCGCAA CACTAGCAAG TACTTTGGCA GCGTGGACTC CCTGGGGCCC 2880
GACCTGCAGG AACCCCTGTG GTTCCTGGGG GCCAACACTG GCGACAAGGT CATGATGACC 2940
TACCAGATGC CTTCCAGAGA CATCCAGAAG GTTCTGCGGG AGGACAAAGA GCGGCTGAGG 3000
CTGATGCAGA AGAGCCAGCC GTGCTTCTCG TCGGAGCAGT GGAGGGAGCT GGTGGAGGAC 3060
CACCCCTGGA TGAGGAGGGG GGGCCTGCCC TCCACCATCA ATGTCAAGGA GTGTGTGTAC 3120
TGTGAAGACA CAGCCACGCA CCCTTCTGCC GAGGAAGACC ACCCAGAAAT GGACCTTGGG 3180
GACAGGGTAG AGGAGAAGGG CCGACAG 3207
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-EqC-020992Equus caballus53.47 0.00e+00 708
CGD-GaG-021834Gallus gallus55.56 0.00e+00 755.4
CGD-HoS-021036Homo sapiens (Human)54.1 0.00e+00 728
CGD-MuM-021066Mus musculus (Mouse)53.48 0.00e+00 697.2
CGD-RaN-022186Rattus norvegicus52.68 0.00e+00 696
Gene Ontology

GO:0005515--protein binding