CGDB Gene Information

Tag Content
CGDB ID CGD-MeG-052536
Ensembl Accession ENSMGAP00000004057.2
Protein Name PER2
Ensembl Information ENSMGAG00000004187; ENSMGAT00000004768
Organism Meleagris gallopavo
NCBI Taxa ID 9103
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
CT 4 CT 12 DD2 27 aortic smooth muscle cells Predicted from orthologs O15055
ZT 4 ZT 21 LD 5 human HaCaT keratinocytes Predicted from orthologs O15055
ZT 1 ZT 19 LD 2.67 human hair follicle cells Predicted from orthologs O15055
CT 12 CT 0 LL1 3.43 oral mucosa Predicted from orthologs O15055
CT 3 CT 15 DD2 5 U2OS cells Predicted from orthologs O15055
CT 6 CT 18 DD1 4 SCN Predicted from orthologs O54943
CT 9 CT 3 DD1 3 eye Predicted from orthologs O54943
ZT 19 ZT 7 LD 2.5 amygdala Predicted from orthologs O54943
ZT 12 ZT 4 LD 2 bone Predicted from orthologs O54943
ZT 13 ZT 5 LD 2.4 bone marrow Predicted from orthologs O54943
ZT 18 ZT 6 LD 1.89 brain Predicted from orthologs O54943
ZT 15 ZT 23 LD 3 cortex Predicted from orthologs O54943
ZT 13 ZT 2 LD 10 heart Predicted from orthologs O54943
ZT 13 ZT 1 LD 2.5 hippocampus Predicted from orthologs O54943
ZT 16 ZT 0 LD 25 jejunum Predicted from orthologs O54943
ZT 15 ZT 23 LD 6 kidney Predicted from orthologs O54943
CT 15 CT 3 DD1 4 liver Predicted from orthologs O54943
ZT 16 ZT 4 LD 7 liver Predicted from orthologs O54943
CT 18 CT 6 DD2 10 MEFs Predicted from orthologs O54943
ZT 17 ZT 1 LD 6 megakaryocytes Predicted from orthologs O54943
ZT 18 ZT 6 LD 3 n primary visualcortex (V1) Predicted from orthologs O54943
CT 0 CT 12 DD2 10 NIH-3T3 cells Predicted from orthologs O54943
CT 12 CT 0 DD3 4.79 ovary Predicted from orthologs O54943
ZT 12 ZT 4 LD 5 pituitary gland Predicted from orthologs O54943
CT 12 CT 20 DD3 5 retina Predicted from orthologs O54943
ZT 12 ZT 16 LD 5 retina Predicted from orthologs O54943
CT 12 CT 20 DD3 6 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
ZT 0 ZT 16 LD 2 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
CT 9 CT 21 DD1 6 SCN Predicted from orthologs O54943
CT 8 CT 16 DD1 20 SCN Predicted from orthologs O54943
CT 15 CT 3 DD1 3 skeletal muscle Predicted from orthologs O54943
CT 14 CT 2 DD3 12 suprachiasmatic nucleus (SCN) Predicted from orthologs O54943
ZT 16 ZT 4 LD 9 abdominal adipose tissue Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 anterior cingulate Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 2.05 area postrema Predicted from orthologs Q9Z301
ZT 18 ZT 2 LD 6.38 AV3V Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 14 basolateral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 10 ZT 6 LD 2 caudal ventrolateral medulla Predicted from orthologs Q9Z301
CT 12 CT 8 DD17 4.35 colon Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 3.29 dorsal vagal motor nucleus Predicted from orthologs Q9Z301
ZT 2 ZT 14 LD 1.8 dorsomedial nucleus Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 5.5 entral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 5.7 heart Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 15 hippocampus Predicted from orthologs Q9Z301
ZT 16 ZT 3 LD 57 intestinal jejunal mucosa Predicted from orthologs Q9Z301
CT 16 CT 4 DD17 5 liver Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 8.5 liver Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q9Z301
ZT 0 ZT 12 LD 7 nucleus accumbens shell Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.07 nucleus ambiguus Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.63 paraventricular nucleus Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 4 prefrontal cortex Predicted from orthologs Q9Z301
ZT 12 ZT 8 LD 2.5 PVN Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 rostral agranular insula Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 3.92 SCN Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
Descriptionperiod circadian clock 2 [Source:HGNC Symbol;Acc:HGNC:8846](View all)
Protein Sequence
(Fasta)		 MIAEDSEIQP KPEHSPEVLQ EDIEMSSGSS GNDFSGNETN ENYSSGHDSH GHESDENGKD 60
SAMLMESSDC HKSSSSNAFS LMIANSEHNQ SSSGCSSEQS TKAKTQKELL KTLQELKAHL 120
PAEKRIKGKS SVLTTLKYAL KSIKQVKANE EYYQLLMINE SQPSGLNVSS YTVEEVETIT 180
SEYIMKNADM FAVAVSLITG KIVYISDQAA SILRCKRGYF KNAKFVELLA PQDVSVFYTS 240
TTPYRLPSWN ICSRAESSTQ DCMEEKSFFC RISAGKEREN EICYHPFRMT PYLIKVQDPE 300
VAEDQLCCVL LAEKVHSGYE APRIPPDKRI FTTTHTPTCL FQDVDERAVP LLGYLPQDLI 360
GTPVLVHLHP NDRPLMLAIH KKKVLQYGGQ PFDYSPIRFC TRNGDYITMD TSWSSFINPW 420
SRKVSFIIGR HKVRTGPLNE DVFAAPNYTE DRILHPSVQE ITEQIYRLLL QCLPLFHCIG 480
ISGYSPGNYL HLTAKHDSLK CVKAPVGIYG IFIQTXAFVA QITVNDQTAN NQERSRSPSL 540
ERLGLTVFES RALDLFAQKL FCSSNILRKM SQVSLCCSAA LATYCLFTID SPVLKASGKA 600
SGPPVVGAHL TSLALPGKPE SVVSLTSQCS YSSTIVHVGD KKTQPELEMI EDGPSGAELL 660
DSQLPAPPSS STHVNQEKES FKKLGLTKEV LAVHTQKEEQ SFLNKFKEIK RFNIFQSHCN 720
YYLQDKPKGR PGERGMAMVF LSLCMNPYKN SGDSLALKIG KRIKPQESSD STASGTKFPH 780
RFPLQGLNTT AWSPSDTSQA SYSAMSFPTV MPAYPLPVFP AAAGTVPPAP ETSVSGFNQL 840
PDSGNTCPVQ PSQFSAPLMT PVVALVLPNY VYPEMNNSLP QTLYHSQANF PTHPAFSSQT 900
NPPTEIEKVP VTETRNEPSR SCTPQSVGPQ DQASPPLFQS RCSSPLNLLQ LEENTKTVES 960
GAPAGLHGAL NEEGAIGKIM TTDDGSGKGS LPKLPQQAES PMDAQNSDAL SMSSVLLDIL 1020
LQEDACSGTG SASSGSGVSA AAESLGSGSN GCDMSGSRTG SSETSHTSKY FGSIDSSENH 1080
HKTKMKAEIE ESEHFIKYVL QDPIWLLMAN TDDTVMMTYQ IPSRDLETVL KEDKLKLKQM 1140
QKLQPKFTED QKRELIEVHP WIQQGGLPKT VANSECIFCE DNIQSNFYTS YDEEIHEMDL 1200
NEMIEDSGEN NLVSLNQVSE EQT 1223
Nucleotide Sequence
(Fasta)		 AGGAATATAT TGATGACCCT TTCATATGGG GAAAGACTAA GCGTGTTCAT TAAGGTGTGA 60
CTTCATTTCT CTTCAGAAAT TGTGCTTGCT TGGGATCGTG TAATACAGAG GTGTCCGGAC 120
TCTGTAATGG TCAAAGATTT CCAGTAGAAG AGGATGAGAC AAGAACTGAA TGCATGTGGG 180
AGACTCTGGA CCTAGGTGCT TCATGCTTTT GATGCTAGCT GGGAGGGAAC TTGATAAACA 240
TTTTCACAAA CTTTTCATAG GAAAAAACAG ATATCTTGCA TATTTCTTTG GCCAAAGGAG 300
GAGAAGTGCA GTTTTTTCTT CTGAAAAATT TGAAATAAAT GTAGAATGTC TGGAAAAACA 360
GCAATTAAAA GGAGCAACAG AAAATGAGTG AGTATTCTGG ACTTGCAAGT AACCATAGCC 420
AGATGATTGC TGAAGATTCT GAAATTCAGC CAAAACCAGA ACACTCTCCT GAAGTTCTTC 480
AGGAAGATAT TGAGATGAGC AGTGGATCCA GTGGAAATGA CTTCAGTGGA AATGAGACGA 540
ATGAAAACTA CTCCAGTGGA CATGATTCTC ATGGCCATGA GTCTGATGAA AATGGGAAAG 600
ATTCAGCAAT GCTCATGGAA TCTTCAGACT GTCATAAAAG TTCAAGCTCA AATGCATTTA 660
GTCTGATGAT TGCAAACTCT GAACACAATC AGTCTAGCAG TGGATGCAGC AGCGAGCAGT 720
CTACTAAAGC CAAAACACAA AAGGAATTGT TGAAGACATT ACAAGAGCTG AAAGCTCACC 780
TTCCTGCTGA AAAGAGAATT AAAGGCAAAT CTAGTGTCCT AACAACATTG AAGTATGCCC 840
TTAAAAGCAT TAAACAAGTT AAAGCCAATG AGGAATATTA CCAATTGCTG ATGATTAATG 900
AATCCCAGCC TTCTGGACTC AATGTGTCAT CTTATACAGT GGAAGAAGTT GAGACTATAA 960
CCTCAGAATA CATCATGAAA AATGCAGATA TGTTTGCTGT AGCTGTATCT TTGATTACTG 1020
GGAAAATTGT GTACATCTCT GATCAAGCTG CTTCGATTCT TCGGTGTAAG AGGGGTTATT 1080
TTAAAAATGC CAAATTTGTG GAGTTATTGG CACCTCAGGA TGTCAGTGTT TTCTATACTT 1140
CTACTACCCC ATACAGATTA CCATCTTGGA ATATTTGCAG CAGAGCTGAG TCTTCCACCC 1200
AGGATTGCAT GGAAGAGAAA TCTTTTTTCT GTCGCATCAG TGCAGGAAAG GAGCGTGAAA 1260
ATGAGATTTG CTATCACCCA TTTCGGATGA CTCCTTACCT TATCAAAGTA CAAGATCCAG 1320
AAGTAGCAGA GGACCAACTT TGCTGTGTGC TGCTTGCAGA AAAAGTGCAT TCTGGTTATG 1380
AAGCACCCAG AATTCCTCCA GACAAAAGAA TTTTTACAAC AACGCACACA CCAACCTGTT 1440
TGTTCCAGGA TGTAGATGAG AGAGCTGTAC CTCTGTTGGG ATACCTACCT CAGGATTTAA 1500
TAGGAACACC AGTTTTGGTG CATCTTCACC CAAATGACAG ACCCTTAATG CTAGCAATTC 1560
ACAAAAAAAA AGTACTTCAA TATGGTGGTC AGCCTTTTGA CTATTCACCA ATCAGGTTTT 1620
GCACTAGAAA TGGAGATTAT ATAACCATGG ACACGAGCTG GTCCAGTTTC ATCAATCCTT 1680
GGAGTCGAAA GGTTTCATTT ATCATTGGAA GACACAAAGT TAGGACGGGT CCCTTAAATG 1740
AAGATGTTTT TGCTGCTCCC AACTATACAG AGGACAGAAT TCTTCACCCC AGCGTTCAGG 1800
AGATCACAGA GCAAATATAT CGGCTATTAC TACAGTGTCT TCCACTGTTC CACTGCATTG 1860
GGATTTCTGG CTACAGTCCT GGAAACTACT TGCATTTGAC TGCCAAGCAT GACTCACTTA 1920
AGTGTGTTAA AGCTCCAGTT GGTATCTATG GTATCTTCAT ACAAACAANA GCTTTTGTTG 1980
CACAGATAAC TGTGAATGAC CAGACAGCTA ATAACCAGGA AAGATCAAGA AGTCCTTCAC 2040
TGGAAAGACT TGGCTTAACT GTGTTTGAGA GTAGAGCATT AGATTTATTT GCTCAGAAGT 2100
TATTCTGTTC CTCAAACATT CTTCGTAAAA TGTCACAAGT AAGCCTTTGC TGTTCTGCAG 2160
CCTTAGCAAC ATATTGCTTA TTTACAATAG ACTCTCCTGT GTTGAAGGCA TCTGGTAAAG 2220
CAAGTGGTCC CCCTGTAGTT GGTGCTCACT TAACTTCTTT GGCCTTACCT GGCAAACCTG 2280
AAAGTGTTGT ATCGCTCACA AGTCAGTGCA GCTACAGTAG CACCATTGTT CATGTTGGAG 2340
ACAAAAAAAC ACAACCTGAA TTAGAAATGA TAGAAGATGG TCCAAGTGGA GCAGAACTCT 2400
TAGATAGCCA ACTTCCAGCC CCTCCATCCA GCTCTACGCA TGTAAATCAG GAAAAGGAGT 2460
CATTTAAAAA ACTGGGACTT ACAAAGGAAG TCCTTGCAGT GCATACACAA AAAGAAGAGC 2520
AAAGCTTTTT GAATAAGTTC AAAGAAATCA AGAGATTCAA TATTTTCCAG TCCCACTGCA 2580
ATTACTACTT ACAGGATAAA CCTAAAGGAA GGCCTGGTGA ACGTGGTATG GCAATGGTTT 2640
TTTTGTCTTT GTGTATGAAT CCATATAAGA ATTCTGGTGA CAGCCTTGCC TTGAAGATTG 2700
GAAAACGCAT TAAACCACAG GAGTCTTCGG ACAGTACAGC TTCTGGAACT AAATTCCCCC 2760
ATCGCTTTCC TCTTCAGGGT TTAAATACTA CTGCTTGGTC ACCATCAGAC ACTTCACAAG 2820
CAAGCTATTC AGCGATGTCT TTTCCAACTG TTATGCCTGC ATATCCACTT CCTGTTTTTC 2880
CAGCAGCAGC AGGGACAGTG CCACCAGCTC CTGAGACTTC AGTCTCTGGT TTTAATCAGC 2940
TGCCAGACTC GGGAAATACT TGCCCTGTGC AACCGTCCCA GTTTTCTGCC CCCCTTATGA 3000
CACCTGTTGT AGCTCTTGTG CTCCCCAACT ATGTCTACCC AGAAATGAAC AATAGCTTAC 3060
CTCAAACGCT TTATCACAGC CAAGCCAATT TTCCTACCCA TCCTGCTTTC TCTTCTCAGA 3120
CAAATCCACC GACAGAAATT GAAAAGGTTC CTGTTACAGA GACACGAAAC GAGCCATCCC 3180
GTTCCTGCAC TCCACAGTCA GTGGGTCCTC AAGACCAGGC TTCACCGCCT TTATTTCAAT 3240
CAAGGTGTAG TTCTCCTCTG AATCTTCTAC AGTTAGAAGA AAACACAAAA ACTGTGGAAA 3300
GCGGAGCCCC TGCAGGTTTG CATGGAGCTC TAAATGAGGA AGGAGCCATA GGCAAAATCA 3360
TGACAACTGA TGATGGTAGT GGAAAGGGAT CCCTACCAAA GTTACCCCAG CAGGCTGAGT 3420
CTCCAATGGA TGCTCAAAAT AGCGATGCGC TCTCCATGTC CAGTGTCCTG CTTGACATTT 3480
TACTTCAAGA AGATGCATGC TCAGGCACTG GCTCAGCTTC ATCAGGGAGC GGCGTATCTG 3540
CAGCTGCTGA ATCTCTTGGG TCTGGATCGA ATGGCTGTGA CATGTCAGGG AGCAGAACAG 3600
GCAGTAGTGA AACTAGTCAT ACCAGCAAAT ACTTCGGGAG TATTGATTCT TCAGAAAACC 3660
ATCATAAAAC AAAAATGAAG GCAGAAATAG AAGAAAGTGA GCACTTCATT AAGTATGTTC 3720
TTCAGGATCC GATATGGCTT TTGATGGCAA ACACAGATGA CACCGTTATG ATGACTTACC 3780
AGATACCCTC TAGAGATTTG GAAACAGTTT TAAAAGAAGA TAAGCTGAAA TTAAAGCAAA 3840
TGCAGAAACT ACAACCAAAA TTTACTGAAG ACCAAAAAAG AGAGCTTATT GAAGTTCATC 3900
CATGGATCCA GCAAGGTGGA CTGCCAAAGA CTGTTGCTAA TTCTGAATGT ATTTTTTGTG 3960
AGGACAATAT ACAGAGCAAT TTTTATACAT CATATGATGA AGAAATCCAT GAAATGGACC 4020
TTAATGAAAT GATTGAAGAC AGTGGGGAGA ACAATCTGGT CTCCCTGAAT CAAGTCAGTG 4080
AAGAACAAAC ATAG 4094
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-HoS-021036Homo sapiens (Human)50.94 0.00e+00 1122.5
CGD-MuM-021066Mus musculus (Mouse)49.84 0.00e+00 1078.2
CGD-RaN-022186Rattus norvegicus48.62 0.00e+00 1067
Gene Ontology

GO:0005515--protein binding
GO:0005654--nucleoplasm
GO:0005634--nucleus
GO:0005737--cytoplasm