CGDB Gene Information

Tag Content
CGDB ID CGD-AsM-058639
Ensembl Accession ENSAMXP00000001488.1
Protein Name per2
Ensembl Information ENSAMXG00000001431; ENSAMXT00000001488
Organism Astyanax mexicanus
NCBI Taxa ID 7994
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 6 ZT 18 LD 5 skeletal muscle Predicted from orthologs F6ZZH0
ZT 21 ZT 9 LD 6 duodenum Predicted from orthologs Q8QGQ8
ZT 2 ZT 18 LD 3.17 embryos Predicted from orthologs Q8QGQ8
ZT 6 ZT 18 LD 8 embryos Predicted from orthologs Q8QGQ8
CT 12 CT 0 DD1 3 granulosa cells Predicted from orthologs Q8QGQ8
ZT 3 ZT 18 LD 84.29 pineal glands Predicted from orthologs Q8QGQ8
ZT 23 ZT 11 LD 2.25 spleen Predicted from orthologs Q8QGQ8
CT 4 CT 12 DD2 27 aortic smooth muscle cells Predicted from orthologs O15055
ZT 4 ZT 21 LD 5 human HaCaT keratinocytes Predicted from orthologs O15055
ZT 1 ZT 19 LD 2.67 human hair follicle cells Predicted from orthologs O15055
CT 12 CT 0 LL1 3.43 oral mucosa Predicted from orthologs O15055
CT 3 CT 15 DD2 5 U2OS cells Predicted from orthologs O15055
CT 6 CT 18 DD1 4 SCN Predicted from orthologs O54943
CT 9 CT 3 DD1 3 eye Predicted from orthologs O54943
ZT 19 ZT 7 LD 2.5 amygdala Predicted from orthologs O54943
ZT 12 ZT 4 LD 2 bone Predicted from orthologs O54943
ZT 13 ZT 5 LD 2.4 bone marrow Predicted from orthologs O54943
ZT 18 ZT 6 LD 1.89 brain Predicted from orthologs O54943
ZT 15 ZT 23 LD 3 cortex Predicted from orthologs O54943
ZT 13 ZT 2 LD 10 heart Predicted from orthologs O54943
ZT 13 ZT 1 LD 2.5 hippocampus Predicted from orthologs O54943
ZT 16 ZT 0 LD 25 jejunum Predicted from orthologs O54943
ZT 15 ZT 23 LD 6 kidney Predicted from orthologs O54943
CT 15 CT 3 DD1 4 liver Predicted from orthologs O54943
ZT 16 ZT 4 LD 7 liver Predicted from orthologs O54943
CT 18 CT 6 DD2 10 MEFs Predicted from orthologs O54943
ZT 17 ZT 1 LD 6 megakaryocytes Predicted from orthologs O54943
ZT 18 ZT 6 LD 3 n primary visualcortex (V1) Predicted from orthologs O54943
CT 0 CT 12 DD2 10 NIH-3T3 cells Predicted from orthologs O54943
CT 12 CT 0 DD3 4.79 ovary Predicted from orthologs O54943
ZT 12 ZT 4 LD 5 pituitary gland Predicted from orthologs O54943
CT 12 CT 20 DD3 5 retina Predicted from orthologs O54943
ZT 12 ZT 16 LD 5 retina Predicted from orthologs O54943
CT 12 CT 20 DD3 6 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
ZT 0 ZT 16 LD 2 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
CT 9 CT 21 DD1 6 SCN Predicted from orthologs O54943
CT 8 CT 16 DD1 20 SCN Predicted from orthologs O54943
CT 15 CT 3 DD1 3 skeletal muscle Predicted from orthologs O54943
CT 14 CT 2 DD3 12 suprachiasmatic nucleus (SCN) Predicted from orthologs O54943
ZT 16 ZT 4 LD 9 abdominal adipose tissue Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 anterior cingulate Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 2.05 area postrema Predicted from orthologs Q9Z301
ZT 18 ZT 2 LD 6.38 AV3V Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 14 basolateral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 10 ZT 6 LD 2 caudal ventrolateral medulla Predicted from orthologs Q9Z301
CT 12 CT 8 DD17 4.35 colon Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 3.29 dorsal vagal motor nucleus Predicted from orthologs Q9Z301
ZT 2 ZT 14 LD 1.8 dorsomedial nucleus Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 5.5 entral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 5.7 heart Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 15 hippocampus Predicted from orthologs Q9Z301
ZT 16 ZT 3 LD 57 intestinal jejunal mucosa Predicted from orthologs Q9Z301
CT 16 CT 4 DD17 5 liver Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 8.5 liver Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q9Z301
ZT 0 ZT 12 LD 7 nucleus accumbens shell Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.07 nucleus ambiguus Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.63 paraventricular nucleus Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 4 prefrontal cortex Predicted from orthologs Q9Z301
ZT 12 ZT 8 LD 2.5 PVN Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 rostral agranular insula Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 3.92 SCN Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
Descriptionperiod circadian clock 2 [Source:ZFIN;Acc:ZDB-GENE-011220-2](View all)
Protein Sequence
(Fasta)		 SSNSHSPSPP SSSNAFSLLS ASSEQDNPST SGCSCSSEES AKAKTQKELI KTLKELKLHL 60
PAEKRNKGSK STTLNTLKYA LRCVKQVEAN EEYYQLLMIN DSQPSGLDVS SYTIDEIDSI 120
TSEYTLKNTD IFAVAVSLIT GKIVYISDQA ASILNCKPDV FKNAKFVEFL TPQDVSVFYS 180
FTTPYRLPSW SMCTGAESSP SDCMQEKSFF CRISGGKECE GDLQYYPFRM TPYRMKVQDT 240
VHTEDQFCCL LLAERVHSGY EAPRIPTDKR IFTTTHTPNC VFQDVDERAV PLLGYLPQDL 300
IGTPVLLHLH PKDRPIMLGI HRKILQYAGQ PFDHSSIRFC TRNGEYITID TSWSSFVNPW 360
SRKVSFVIGR HKVRMGPVNE DVFAAPPTAE GKVMDSDIQE ITEQIHRLLL QPVHNNGSSG 420
YGSLGSNDHL MSVASSSESN GNGTRPHFED EENSRAKPRT FQEICKGVHM QKNQEQQTRK 480
APGKSLQKSP AVRPKDSAYP TTWRENEEAQ QAPVQEELTF KDQTVYSYQQ ISCLDSVIRY 540
LESCNVPITV KRKCQSSSNT TSSNSDEDKQ KAAERSMQVS EDSSHLKSQA GLTSLDVSKK 600
PGGSGVVSTS LTPLALPSKA ESVVSITSQC SYSSTIVHVG DKKPQPESEI IEDGPGAGDT 660
GDGPAVAVTP ATVSPPSQER EAYKKLGLTK QVLAAHTQNE EQAFLNRFRE LRGVHAFKAD 720
CSHYLERQRG QVTSDAVPTR VAKQGGVTEP VARRGSRNKK TKSKRIKQNE SSDSTISHRK 780
QLSRQELQGL NQTSWSPSET SQSTYPMAYP AVMPAYPLQV YPGTNTMAPR VDASLSGFGG 840
SQCSQDPRCP IQPIQAPFSA PLVTPMVALV LPNYMFPQIG SAPRQPFYPE QGTFAAQPSF 900
PPQTVFPPQT SFQPQTTVQF PVQTQFTTQN PFPPPTTFPT QPFQFPLPND PPKPMEPELR 960
EAQSRSSTPQ SMGGRDQPSP PLFQSRCSSP LQLNLLQLEE SQRSMERQDS SAPSTGAQGN 1020
TSTAAEKTLA KTDKEQSIKN VLQDEGSTAD GHHCDALSSS SDMLDILLLE DSRSGTGSAT 1080
SGSMGSGSNG CGTSACGTSA SGGSASGTGS SHTSNNSSNY FGSVDSSQKS HKANGGVSGS 1140
MEMEESESLI KYELQDPLWL LTANVDKTVM MTYQLPSRDF QRVLREDREK LRHMQKSQPR 1200
FSEEQKRELA EVHPWLRRGG LPKSIDVKAC VGCEGVTEML IEEELPDLHM GESEHSDVTV 1260
PPSNHEQ 1267
Nucleotide Sequence
(Fasta)		 AGCTCAAACT CTCACAGTCC CTCTCCTCCA AGCAGCTCCA ATGCCTTCAG CCTGCTGAGT 60
GCCAGTTCTG AACAGGACAA CCCGTCCACC AGTGGCTGCA GCTGCAGTAG TGAAGAGTCT 120
GCCAAGGCCA AGACACAGAA GGAGCTGATC AAAACTCTCA AAGAACTGAA GCTCCATTTG 180
CCAGCGGAAA AGAGGAACAA GGGCAGCAAG TCCACAACTC TCAACACCCT GAAATACGCT 240
CTGCGCTGCG TTAAACAGGT TGAAGCCAAT GAAGAGTACT ACCAGTTGCT TATGATCAAT 300
GACAGCCAGC CATCTGGCCT GGATGTGTCG TCATATACAA TAGATGAGAT CGACAGCATC 360
ACATCAGAAT ACACCCTCAA AAATACAGAT ATCTTTGCGG TGGCTGTGTC TCTGATCACT 420
GGGAAGATCG TGTACATCTC GGATCAGGCA GCGTCCATTC TCAACTGCAA GCCTGACGTG 480
TTCAAGAACG CCAAATTTGT GGAGTTCCTG ACGCCGCAGG ATGTCAGCGT GTTCTACAGC 540
TTCACCACTC CTTACAGGCT GCCTTCCTGG AGCATGTGCA CCGGAGCAGA ATCCTCACCC 600
TCTGACTGCA TGCAGGAAAA GTCCTTCTTC TGTCGGATCA GTGGTGGGAA GGAGTGTGAG 660
GGAGATCTGC AGTATTATCC GTTCCGAATG ACTCCCTACC GGATGAAGGT TCAGGATACA 720
GTACACACTG AAGATCAGTT CTGCTGCCTC CTGCTGGCTG AGAGAGTGCA CTCCGGCTAT 780
GAAGCTCCCA GGATCCCCAC TGACAAACGC ATCTTCACCA CCACACACAC ACCCAACTGT 840
GTGTTTCAGG ATGTGGATGA GAGGGCTGTC CCATTGCTAG GCTACCTACC ACAGGATCTT 900
ATTGGTACAC CTGTGCTCCT GCACCTGCAT CCGAAGGATC GACCAATCAT GCTTGGAATT 960
CATAGGAAGA TCCTGCAGTA TGCCGGTCAG CCATTTGACC ACTCCTCCAT CCGGTTCTGT 1020
ACACGGAATG GAGAATACAT CACAATAGAC ACCAGCTGGT CCAGCTTCGT CAATCCCTGG 1080
AGCCGCAAAG TGTCATTCGT CATCGGACGA CACAAAGTTC GCATGGGTCC AGTGAATGAG 1140
GATGTGTTTG CAGCTCCACC AACAGCAGAG GGGAAAGTTA TGGACTCAGA CATCCAGGAA 1200
ATCACTGAGC AGATACATCG GCTACTGCTA CAGCCGGTAC ATAACAACGG CTCGAGCGGC 1260
TACGGCAGCC TAGGCAGTAA TGATCACCTG ATGAGCGTGG CGTCATCCAG CGAGAGTAAC 1320
GGTAACGGAA CTCGCCCGCA CTTCGAGGAC GAGGAGAACA GCAGAGCCAA ACCTAGAACC 1380
TTTCAGGAGA TCTGTAAGGG TGTTCACATG CAGAAGAACC AGGAGCAGCA GACCAGAAAG 1440
GCTCCAGGCA AGTCACTCCA GAAGAGTCCG GCAGTTCGGC CCAAAGACTC TGCCTATCCA 1500
ACAACCTGGC GTGAGAATGA GGAGGCGCAA CAGGCTCCTG TACAGGAGGA GCTCACCTTT 1560
AAGGACCAGA CTGTTTACTC CTACCAGCAG ATCAGCTGCC TGGACAGCGT CATCAGGTAT 1620
CTGGAGAGCT GTAATGTGCC TATCACAGTG AAAAGAAAGT GCCAGTCCTC CTCCAACACC 1680
ACGTCGTCTA ATTCGGACGA GGACAAGCAG AAAGCTGCTG AGCGATCCAT GCAGGTGTCT 1740
GAAGACTCCA GTCATCTGAA ATCGCAAGCA GGCCTCACGT CTCTGGATGT TTCGAAGAAG 1800
CCAGGTGGTT CCGGTGTTGT GAGCACCTCC CTGACCCCGC TGGCTCTACC CAGTAAAGCC 1860
GAGAGTGTGG TGTCCATCAC CAGCCAGTGC AGCTACAGCA GCACCATTGT ACACGTGGGG 1920
GACAAGAAAC CCCAGCCAGA GTCAGAGATC ATCGAAGATG GCCCTGGTGC TGGAGACACA 1980
GGAGATGGTC CTGCTGTAGC TGTTACTCCT GCCACAGTTT CACCTCCCAG CCAGGAACGG 2040
GAGGCCTACA AGAAACTGGG CCTGACCAAG CAGGTGCTGG CAGCCCACAC TCAGAACGAG 2100
GAGCAGGCCT TCCTCAACCG CTTCAGAGAG CTGAGGGGGG TTCACGCTTT CAAAGCAGAC 2160
TGCTCCCATT ACCTGGAGAG GCAGAGGGGT CAGGTCACAT CTGATGCTGT GCCCACTCGT 2220
GTTGCCAAGC AAGGAGGCGT CACGGAACCC GTCGCTCGCC GGGGGAGTCG CAACAAGAAG 2280
ACCAAGTCCA AACGCATCAA GCAGAATGAG TCATCCGACA GCACCATCTC ACACAGGAAG 2340
CAGCTGTCCA GGCAAGAGCT CCAGGGCCTG AACCAAACCT CCTGGTCTCC ATCAGAAACC 2400
TCGCAGTCCA CCTACCCCAT GGCCTACCCA GCTGTAATGC CTGCCTACCC GCTCCAGGTC 2460
TACCCAGGGA CCAACACTAT GGCTCCCAGG GTGGACGCCT CGCTCTCAGG ATTTGGGGGC 2520
AGCCAGTGCA GCCAGGACCC ACGCTGCCCC ATCCAACCCA TCCAAGCCCC CTTTTCAGCC 2580
CCTCTGGTCA CGCCCATGGT GGCATTGGTC CTGCCTAACT ATATGTTCCC GCAAATAGGC 2640
AGCGCCCCCC GCCAACCATT CTACCCTGAA CAAGGAACCT TTGCTGCTCA GCCATCATTT 2700
CCCCCACAGA CTGTTTTCCC TCCCCAGACC TCGTTTCAGC CACAGACGAC CGTACAATTT 2760
CCTGTACAGA CTCAGTTCAC CACGCAAAAC CCTTTCCCCC CGCCCACGAC CTTCCCCACC 2820
CAGCCCTTTC AGTTTCCTCT CCCAAACGAT CCTCCAAAGC CCATGGAACC AGAGCTGAGG 2880
GAGGCGCAGT CACGGAGCTC CACCCCTCAG TCTATGGGTG GGCGGGACCA ACCGTCTCCG 2940
CCTCTTTTTC AGTCACGGTG CAGTTCGCCC CTGCAGCTCA ACCTGCTGCA GCTGGAGGAG 3000
AGCCAACGGT CTATGGAGAG ACAGGACAGC TCGGCGCCCT CTACTGGAGC TCAGGGGAAC 3060
ACCAGCACTG CAGCAGAGAA GACTCTGGCC AAGACTGACA AGGAGCAGAG TATAAAAAAT 3120
GTGTTGCAGG ATGAGGGCTC GACGGCTGAC GGTCATCACT GTGACGCTCT CTCATCATCC 3180
AGTGACATGC TGGACATCCT CCTGCTGGAG GACTCTCGCT CAGGGACAGG GTCCGCCACC 3240
TCCGGGTCCA TGGGCTCAGG TTCGAATGGA TGTGGGACCT CAGCCTGCGG GACTTCTGCC 3300
AGCGGAGGGT CTGCAAGTGG AACAGGGAGC AGTCACACAA GCAATAACAG CAGTAACTAC 3360
TTCGGCAGTG TGGACTCTTC ACAGAAGTCC CATAAGGCCA ACGGTGGTGT TTCAGGGTCC 3420
ATGGAGATGG AGGAGAGCGA GAGCTTGATA AAATATGAAC TGCAGGATCC TCTGTGGCTC 3480
CTCACAGCCA ACGTAGACAA GACTGTTATG ATGACGTACC AGCTGCCCTC TCGTGATTTC 3540
CAGCGGGTGT TGCGTGAGGA CCGTGAGAAA CTGAGGCACA TGCAGAAGAG TCAGCCACGT 3600
TTTTCTGAGG AGCAGAAGAG GGAGCTGGCT GAGGTTCATC CCTGGTTGAG GAGGGGAGGC 3660
CTGCCCAAAT CCATAGATGT CAAGGCATGT GTCGGCTGTG AGGGAGTCAC AGAGATGCTT 3720
ATTGAAGAGG AGCTCCCAGA CCTGCACATG GGGGAGTCTG AACACAGCGA TGTCACAGTG 3780
CCCCCCTCAA ACCACGAGCA GTGAAACAGA CACATTTCCA GGGTCCCTAT GTTTCAGTGT 3840
TGGGGATTCC ACTGTGTATT CAGTTAGGTC CTCTAAACAA GAGTGTGTAC ATATGGAATG 3900
TGTGTGTGTG TGTGTGTGTT CATAAAGCCT CCATAAATAT ACGTAAATTC AAATGTGAGA 3960
TTTTATCAGC TGTTTAAAGC TGTTTGCAGA CTTTACGAAT GTTCCCTGTA TATTCATTTT 4020
CTGTTTCTTT GTTGTCATAA TAACATTTTA TTTTGTTATT TTTTATGACA TTCTTTTTTC 4080
TTTTTTTTTT CTTTAAATTG ATGTACAGAA TCATTTCTTT TGCCATGCGT CACATTTTTT 4140
GGAACACTTT TTTTGTTATT TTTTTCTTTC TTTCATTTTT TTCCTTACAG TTCTCCAGAG 4200
AGCAGGGGAG ATGTAGCTCA CGTGTCAAAA GAGGGTCAAT GTATTTTTTT TTTAATTTGA 4260
AGAAGTCACA AATATACAGC ACTGTGCAAA AGTTTTAATT TTAAATTCTA ATGAAAAGCA 4320
CCTTATTTGG GCAGTATATG TTTATTTACA AGGTATTTGT TTATAATAAT ATTAGAATAA 4380
ATCCAAATAA CACTCATACA AAAGCAGTGG TTTTATGTAT TGTCACTGTA AAAATATTGT 4440
TATATTGTAA TATTGTAATA TTTTCTGGGA CAATTTATCA TCCAAATAAC AGTGTTTGGA 4500
ATCTAGCATA ATTGGTAAAT CAGTGCTTAA TGATGTCATG AAATTGAAAA CATCCAGCAT 4560
AGGGGTGTCT AGCTCATAAG TCTGCTTTCT TTAAAAGAAA GAAATTATTG ACGTTTTTAA 4620
GAGTATTTTT ATTTATCTGC ATATGTTTTA ATGTGAATTA GTATTTCAAG AAGAGACATT 4680
TTATTTCTGA GATAAATGGC AACCTTTAAA TATTGTGCTT AGGAGCCTTA AACTTCTGCA 4740
CAGTTCTATA TATCCTTTTA TTTTTTTAAT GTGAAGCAAG AAATGTATAT AGATTTTTTT 4800
ATATCTGCTG AATCTGGAGA ATTGTATTTA TGTGGAGAGA TTATTTATCA GTCTGCAGTA 4860
ATAGGACAGG AGAAAATGAG AGAAACAAAT GGGGACCAAG CTCCTGCGTT TACCTCTGTT 4920
TACTCTGTTA CACGTGCAAT GAAAAGAATA TAATATATGT TTTATAATAT GTAAGTTATT 4980
TTATATCATA TTTTTTTGGA AAATTACACT CTTAAAATAA AGATGCTATT AAGAATTATT 5040
TGAGTAATGC CATGGTAAAA CCATATTGGT TCTGTAACAA AGACTTTGCG GTACTTTCAC 5100
ATTAAAATGT TACGGTCCTT TACCAGTTTA AAGCAGCATT ATGAGAAAAC TGATGTGTCT 5160
TGTGAATTTG CGTTAGTTTC AGCTACCATT AAAGAAGGAC ACACTTTACA CATGCATTTT 5220
TGGACAAGCC GGGGGACACA GAACAGTCAC TGAAAGTGAG AGAAGCGTGT GAACTGAGCA 5280
CTGAGAAATA TTACTGGATT TTACACGAAT ATGACTCAGC GCTCAGTTTT GCCAAGCACT 5340
GTCCTTTACC AGAGTTAGCA GCATCAGAAT GATTTGAAGC TGAAAATATT ACATAATGCT 5400
GCTTTAAAGG CCTTCAGTCT GAAACATGTA TAGTTCTTCT GTAGCATCAC TCAAAGAACA 5460
ATTTGAAGCA CCTTTATTTT AATAGTGTAC GGTACGAAGC TCTGAAGGCC TTGCTGGCTT 5520
GTGGATGAGA CAATCTTTGA CTTTGGTGTT CAGTTAAAGA CAGTTAAAGT TTTAATTTAA 5580
AAGAAACAGC ACTTAAATGC TGCCTTAAGA GTTTTTTTTC TTTGTAGAAA AGTGTGTTTG 5640
AGTTTTAACT GTAATTTCTA CATTTCCTCT TTCCTCTGTG CTATCGTTCA GCCGAGTTGG 5700
GCTGGAGCCT GACGTCTGAG AGCTGAGACA CTAGGGGGAT GGGGGGGATT TATTGGGGGA 5760
AATTAATTTT ATTTTAGTCT TAATAAGGCT GCAGGTAGAA AAGAGCACAC TCTAAATGTC 5820
ACAATTGAAC GTGTTTACTG TACAATAAAT GTTGTACGTG TTATAATGAC ATTTCTTTGA 5880
AATAAAGTTT TGTTTTATAG AAATAAATCC TGAAGTTGTG AGTATATTAT ATTGTCTATT 5940
AATTTATTAG TATATATTAT TTATATAGA 5969
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-EqC-020992Equus caballus43.13 0.00e+00 871.7
CGD-GaG-021834Gallus gallus53.99 0.00e+00 911.8
CGD-HoS-021036Homo sapiens (Human)44.67 0.00e+00 904.8
CGD-MuM-021066Mus musculus (Mouse)43.73 0.00e+00 864.8
CGD-RaN-022186Rattus norvegicus43.14 0.00e+00 872.1
Gene Ontology

GO:0005515--protein binding
GO:0006355--regulation of transcription, DNA-templated