CGDB Gene Information

Tag Content
CGDB ID CGD-DiO-057828
Ensembl Accession ENSDORP00000010587.1
Protein Name Per2
Ensembl Information ENSDORG00000011263; ENSDORT00000011267
Organism Dipodomys ordii
NCBI Taxa ID 10020
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 12 ZT 0 LD >10 Predicted from orthologs Q65ZG8
ZT 6 ZT 18 LD 5 skeletal muscle Predicted from orthologs F6ZZH0
ZT 21 ZT 9 LD 6 duodenum Predicted from orthologs Q8QGQ8
ZT 2 ZT 18 LD 3.17 embryos Predicted from orthologs Q8QGQ8
ZT 6 ZT 18 LD 8 embryos Predicted from orthologs Q8QGQ8
CT 12 CT 0 DD1 3 granulosa cells Predicted from orthologs Q8QGQ8
ZT 3 ZT 18 LD 84.29 pineal glands Predicted from orthologs Q8QGQ8
ZT 23 ZT 11 LD 2.25 spleen Predicted from orthologs Q8QGQ8
CT 4 CT 12 DD2 27 aortic smooth muscle cells Predicted from orthologs O15055
ZT 4 ZT 21 LD 5 human HaCaT keratinocytes Predicted from orthologs O15055
ZT 1 ZT 19 LD 2.67 human hair follicle cells Predicted from orthologs O15055
CT 12 CT 0 LL1 3.43 oral mucosa Predicted from orthologs O15055
CT 3 CT 15 DD2 5 U2OS cells Predicted from orthologs O15055
CT 6 CT 18 DD1 4 SCN Predicted from orthologs O54943
CT 9 CT 3 DD1 3 eye Predicted from orthologs O54943
ZT 19 ZT 7 LD 2.5 amygdala Predicted from orthologs O54943
ZT 12 ZT 4 LD 2 bone Predicted from orthologs O54943
ZT 13 ZT 5 LD 2.4 bone marrow Predicted from orthologs O54943
ZT 18 ZT 6 LD 1.89 brain Predicted from orthologs O54943
ZT 15 ZT 23 LD 3 cortex Predicted from orthologs O54943
ZT 13 ZT 2 LD 10 heart Predicted from orthologs O54943
ZT 13 ZT 1 LD 2.5 hippocampus Predicted from orthologs O54943
ZT 16 ZT 0 LD 25 jejunum Predicted from orthologs O54943
ZT 15 ZT 23 LD 6 kidney Predicted from orthologs O54943
CT 15 CT 3 DD1 4 liver Predicted from orthologs O54943
ZT 16 ZT 4 LD 7 liver Predicted from orthologs O54943
CT 18 CT 6 DD2 10 MEFs Predicted from orthologs O54943
ZT 17 ZT 1 LD 6 megakaryocytes Predicted from orthologs O54943
ZT 18 ZT 6 LD 3 n primary visualcortex (V1) Predicted from orthologs O54943
CT 0 CT 12 DD2 10 NIH-3T3 cells Predicted from orthologs O54943
CT 12 CT 0 DD3 4.79 ovary Predicted from orthologs O54943
ZT 12 ZT 4 LD 5 pituitary gland Predicted from orthologs O54943
CT 12 CT 20 DD3 5 retina Predicted from orthologs O54943
ZT 12 ZT 16 LD 5 retina Predicted from orthologs O54943
CT 12 CT 20 DD3 6 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
ZT 0 ZT 16 LD 2 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
CT 9 CT 21 DD1 6 SCN Predicted from orthologs O54943
CT 8 CT 16 DD1 20 SCN Predicted from orthologs O54943
CT 15 CT 3 DD1 3 skeletal muscle Predicted from orthologs O54943
CT 14 CT 2 DD3 12 suprachiasmatic nucleus (SCN) Predicted from orthologs O54943
ZT 16 ZT 4 LD 9 abdominal adipose tissue Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 anterior cingulate Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 2.05 area postrema Predicted from orthologs Q9Z301
ZT 18 ZT 2 LD 6.38 AV3V Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 14 basolateral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 10 ZT 6 LD 2 caudal ventrolateral medulla Predicted from orthologs Q9Z301
CT 12 CT 8 DD17 4.35 colon Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 3.29 dorsal vagal motor nucleus Predicted from orthologs Q9Z301
ZT 2 ZT 14 LD 1.8 dorsomedial nucleus Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 5.5 entral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 5.7 heart Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 15 hippocampus Predicted from orthologs Q9Z301
ZT 16 ZT 3 LD 57 intestinal jejunal mucosa Predicted from orthologs Q9Z301
CT 16 CT 4 DD17 5 liver Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 8.5 liver Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q9Z301
ZT 0 ZT 12 LD 7 nucleus accumbens shell Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.07 nucleus ambiguus Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.63 paraventricular nucleus Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 4 prefrontal cortex Predicted from orthologs Q9Z301
ZT 12 ZT 8 LD 2.5 PVN Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 rostral agranular insula Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 3.92 SCN Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
Descriptionperiod circadian clock 2 [Source:MGI Symbol;Acc:MGI:1195265](View all)
Protein Sequence
(Fasta)		 MNGYTDFPRS PSSPAEASKE TQPGQAALQE DVDMSSGSSG NETNGNCSTG RGSQASDCED 60
SGKELGMLVE APDSHQSPNA FSLLMAETEH NPSTSTSGCS SEQSSKADTH KELIRTLREL 120
KVHLPADKKA KGKASTLATL KYALRSVKQV KANEEYYQLL MSSESQPCSV DVPSYTVEQV 180
EGTTSEYIMQ NADMFAVAVS LVTGKILYIS NQVASIFHCK RDAFSDTKFV EFLAPHDVSV 240
FHSSTTPYKL PSWSVCGVVD SFSQECMEEK SFFCRVSVGK RHEHEIHYQP FRMTPYLAKV 300
QEQRAPESQL CCLLLAERVH SGYEAPRIPP EKRIFTTTHT PNCLFQDVDE RAVPLLGYLP 360
QDLIETPLLM QIHPSDRPLM LAIHKKILQS GGQPFDYSPI RFRARNGEYI TLDTSWSSFI 420
NPWSRKISFI IGRHRVRVGP LNEDVFAAPP GVEEKAPHPS IQELTEQIHR LLLQPIPHSG 480
SSGYGSLGSN GSHEHLMSQT SSSDSNGHEE ARRRRSEISK NGSKSKTKSH FSHEAGAQKK 540
TSVPEIQSSP PATQVKVVPA TEESPGVSSP KAGFPEELAC KNQPACSYQQ ISCLDSVIRY 600
LESCSEASTL KRKCEFPAHI PSRKATVSPG LHPGEASAPC KVNSHAEVSA HLTSLTLPSK 660
AESVVSLTSQ CSYSSTIVHV GDKKPQPELE TVEDAASGPE SLDGLLGLNQ EKGPLQKLGL 720
TKEVLAAHTQ REEQGFLQRF REVRRLGALQ AHCQYYLQER SRAQSGERAA PGLKNSSGLE 780
SSWKKAGKNR KLKSKRAKPQ DSSDSTGSGG PWPHRPPLVG LNTTAWSPSD TSQSSCSAVP 840
FPAPVSAYSL PVFPAPGAVA APPAVPQASF AVPVVPVDAQ HEFAVQPLQL AAPLAPVMAL 900
MLPSYPFPPA TPNLPQAFFP NQAHFPDHPM LPSEMTATPQ PEFPSQTSLL RQPCTCPATP 960
ATPPLSATAA TGRASPPLFQ SRGSSPLQLN LLQLEEAPEV SAGATGAPGT AGLDSIPGAS 1020
QDWQPKAPPT HKEPSDPPNS DALSTSSDLL NLLLNEDLCS ATGSATSDSL GSSSLGCDAS 1080
RSGAGSSDTS HTSKYFGSID SSENNHKAKL HADMEESEHF IKYVLQDPIW LLMADTDDSI 1140
MMTYQLPSRD LETVLKEDRE KLRLLQGSQP QFTESQRREL LEVHPWVQTG SLPSAIDVTE 1200
CVYCESEERD NACVPYEEGI SSLGLSDMSD TKEEESRGPL SPRKEEQT 1248
Nucleotide Sequence
(Fasta)		 ATGAATGGCT ACACAGACTT TCCCCGCAGC CCCAGCAGTC CTGCTGAGGC GTCCAAGGAG 60
ACCCAGCCGG GTCAGGCTGC GCTCCAGGAA GATGTGGACA TGAGCAGTGG CTCAAGTGGA 120
AATGAAACCA ATGGCAACTG CTCCACAGGC CGTGGCTCCC AGGCCAGCGA CTGTGAGGAC 180
AGTGGGAAGG AGCTGGGGAT GTTGGTGGAG GCTCCCGACT CGCATCAGAG TCCCAATGCC 240
TTCAGCCTGC TCATGGCGGA GACTGAGCAC AACCCGTCTA CGTCTACCAG TGGCTGCAGC 300
AGCGAGCAGT CTTCCAAGGC AGACACACAC AAAGAACTGA TAAGAACGCT GAGGGAGCTG 360
AAGGTCCACC TCCCTGCAGA CAAGAAGGCG AAAGGCAAGG CCAGCACGCT GGCGACCTTG 420
AAGTATGCCC TGAGGAGTGT GAAGCAAGTG AAAGCTAACG AGGAGTATTA CCAGCTGCTG 480
ATGTCCAGCG AGAGCCAGCC CTGCAGCGTG GACGTGCCCT CTTACACTGT GGAGCAGGTG 540
GAGGGCACCA CCTCCGAGTA CATCATGCAG AACGCGGACA TGTTTGCTGT GGCTGTGTCC 600
CTGGTCACCG GGAAGATCCT GTACATCTCC AACCAAGTTG CCTCCATATT TCACTGTAAG 660
AGAGATGCCT TCAGTGACAC CAAGTTCGTG GAGTTCCTGG CTCCTCACGA CGTCAGCGTG 720
TTCCACAGTT CCACCACCCC TTACAAGCTT CCGTCCTGGA GCGTGTGCGG GGTCGTAGAT 780
TCCTTCTCTC AGGAGTGCAT GGAGGAGAAA TCCTTCTTTT GCCGTGTCAG TGTCGGGAAG 840
CGCCACGAGC ATGAGATCCA CTACCAGCCA TTCCGCATGA CGCCCTACCT GGCCAAGGTA 900
CAGGAGCAGC GGGCACCTGA GAGCCAGCTC TGCTGTCTGC TGCTGGCAGA GAGGGTGCAC 960
TCAGGCTATG AAGCCCCCAG AATTCCTCCG GAGAAGAGAA TCTTCACAAC GACTCATACG 1020
CCGAACTGCT TGTTCCAGGA TGTAGATGAA AGGGCAGTCC CCCTCCTGGG CTATCTACCT 1080
CAGGACCTGA TCGAGACACC CCTACTCATG CAGATCCACC CCAGCGACAG GCCCTTGATG 1140
CTTGCCATCC ACAAAAAGAT CCTGCAGTCC GGTGGGCAGC CTTTCGACTA TTCTCCCATT 1200
CGGTTCCGCG CCCGGAACGG GGAGTACATC ACACTAGACA CCAGCTGGTC CAGCTTCATC 1260
AACCCGTGGA GCAGGAAAAT CTCCTTCATC ATCGGGAGGC ACAGAGTCAG GGTGGGCCCC 1320
TTGAATGAGG ATGTGTTCGC AGCCCCCCCG GGAGTGGAGG AGAAGGCCCC ACACCCCAGC 1380
ATTCAGGAGC TCACAGAGCA GATCCACAGG CTGCTGCTGC AGCCCATCCC CCACAGTGGC 1440
TCCAGTGGCT ACGGCAGCCT GGGCAGCAAT GGGTCCCATG AGCATCTCAT GAGTCAGACC 1500
TCATCCAGTG ACAGCAACGG CCACGAGGAG GCTCGCCGGA GGAGATCCGA AATTTCTAAA 1560
AATGGTAGCA AGAGCAAAAC CAAAAGTCAT TTTTCTCATG AAGCTGGAGC ACAAAAGAAA 1620
ACTTCCGTTC CAGAAATACA GAGTAGCCCT CCAGCTACTC AGGTAAAAGT TGTTCCTGCC 1680
ACAGAGGAGA GCCCCGGGGT GAGCTCACCC AAGGCCGGCT TCCCTGAGGA GCTGGCCTGC 1740
AAGAACCAGC CCGCCTGCTC CTACCAGCAG ATCAGCTGCC TGGACAGTGT CATCAGGTAC 1800
CTGGAGAGCT GCAGTGAGGC CTCCACCCTG AAGAGGAAGT GTGAGTTCCC TGCACACATC 1860
CCGTCGCGGA AGGCCACCGT CAGCCCCGGA CTGCATCCCG GAGAGGCCTC TGCACCCTGC 1920
AAGGTGAACA GCCACGCGGA AGTCAGTGCG CACTTGACCT CCCTAACGCT GCCCAGCAAG 1980
GCCGAGAGCG TGGTGTCCCT CACCAGCCAG TGCAGCTACA GCAGCACCAT CGTTCATGTG 2040
GGGGACAAAA AGCCGCAGCC CGAGTTAGAG ACAGTAGAAG ATGCCGCGAG TGGGCCTGAG 2100
TCCTTGGATG GCCTGCTGGG CCTGAATCAG GAGAAAGGGC CCTTGCAGAA GCTGGGCCTC 2160
ACCAAGGAAG TGCTGGCGGC CCACACACAG AGGGAAGAGC AGGGCTTCCT GCAGAGGTTC 2220
AGGGAGGTGA GGCGGCTGGG TGCTCTCCAG GCCCACTGCC AGTACTACCT GCAGGAGAGA 2280
TCCAGGGCCC AGTCCGGTGA ACGAGCTGCC CCTGGACTAA AAAATAGTTC TGGACTTGAG 2340
TCATCTTGGA AAAAAGCTGG GAAGAATAGA AAACTGAAGT CCAAGAGGGC CAAGCCTCAG 2400
GACTCATCTG ATAGCACGGG TTCTGGGGGG CCTTGGCCCC ATCGGCCCCC ACTTGTGGGC 2460
CTGAACACCA CGGCCTGGTC ACCCTCGGAC ACCTCCCAGT CCAGCTGCTC TGCTGTGCCG 2520
TTCCCCGCCC CAGTGTCAGC TTACTCTCTG CCCGTGTTCC CAGCACCAGG GGCTGTGGCA 2580
GCACCGCCTG CAGTGCCGCA GGCCAGCTTT GCAGTGCCCG TGGTGCCCGT GGATGCCCAG 2640
CACGAGTTTG CAGTCCAGCC CCTGCAGCTC GCGGCTCCCT TGGCCCCAGT CATGGCCTTG 2700
ATGCTACCCA GCTATCCTTT CCCACCCGCG ACCCCAAACC TACCCCAGGC CTTCTTCCCC 2760
AACCAGGCCC ACTTTCCAGA CCACCCCATG CTCCCCTCTG AGATGACCGC CACCCCGCAG 2820
CCAGAGTTCC CCAGCCAGAC CTCACTCCTC AGACAGCCGT GCACTTGCCC CGCCACCCCG 2880
GCCACCCCAC CGCTATCAGC CACGGCGGCC ACGGGCAGGG CCTCCCCGCC ACTCTTCCAG 2940
TCTCGAGGGA GCTCACCCCT GCAACTCAAC CTGCTGCAGC TGGAGGAGGC GCCTGAGGTC 3000
AGCGCCGGCG CCACGGGGGC CCCGGGGACA GCTGGACTGG ACAGCATACC TGGCGCTTCC 3060
CAGGACTGGC AGCCAAAGGC ACCTCCAACA CACAAGGAAC CCTCCGACCC CCCGAACAGC 3120
GATGCTCTCT CCACATCCAG TGACCTGCTC AACCTCCTAC TCAACGAGGA CCTCTGCTCA 3180
GCCACAGGCT CGGCCACCTC GGATTCTCTG GGTTCCAGCT CACTGGGCTG TGATGCATCC 3240
CGCAGTGGGG CAGGCAGTAG TGACACAAGT CATACCAGCA AATACTTTGG AAGCATTGAC 3300
TCTTCAGAGA ATAACCACAA AGCTAAGCTG CATGCAGACA TGGAGGAGAG TGAGCATTTC 3360
ATTAAGTACG TCCTGCAGGA CCCCATCTGG CTACTGATGG CAGACACCGA CGACAGTATC 3420
ATGATGACCT ACCAGCTGCC CTCCCGGGAT CTCGAAACGG TCTTGAAGGA GGACCGAGAG 3480
AAGCTGAGGC TGCTGCAGGG GTCCCAGCCC CAGTTCACAG AAAGCCAGAG GCGGGAGCTG 3540
CTGGAGGTCC ACCCATGGGT CCAGACGGGC AGCCTGCCCT CCGCCATCGA CGTGACGGAA 3600
TGCGTGTACT GTGAAAGCGA AGAGAGAGAC AACGCTTGCG TGCCATACGA GGAAGGCATT 3660
TCTTCCCTGG GACTCAGCGA CATGTCAGAC ACCAAAGAGG AGGAAAGCCG TGGCCCCCTG 3720
AGTCCCAGGA AGGAAGAGCA GACATAA 3747
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-CaE-021686Caenorhabditis elegans24.68 4.30e-20 97.83
CGD-EqC-020992Equus caballus65.17 0.00e+00 1517.3
CGD-GaG-021834Gallus gallus50.39 0.00e+00 1162.9
CGD-HoS-021036Homo sapiens (Human)67.72 0.00e+00 1667.5
CGD-MuM-021066Mus musculus (Mouse)69.69 0.00e+00 1684.5
CGD-RaN-022186Rattus norvegicus69.19 0.00e+00 1676.8
Gene Ontology

GO:0005515--protein binding
GO:0006355--regulation of transcription, DNA-templated
GO:0005654--nucleoplasm
GO:0005634--nucleus
GO:0005737--cytoplasm