CGDB Gene Information

Tag Content
CGDB ID CGD-OrC-065009
Ensembl Accession ENSOCUP00000000190.3
Protein Name PER2
Ensembl Information ENSOCUG00000000215; ENSOCUT00000000216
Organism Oryctolagus cuniculus
NCBI Taxa ID 9986
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 6 ZT 18 LD 5 skeletal muscle Predicted from orthologs F6ZZH0
ZT 21 ZT 9 LD 6 duodenum Predicted from orthologs Q8QGQ8
ZT 2 ZT 18 LD 3.17 embryos Predicted from orthologs Q8QGQ8
ZT 6 ZT 18 LD 8 embryos Predicted from orthologs Q8QGQ8
CT 12 CT 0 DD1 3 granulosa cells Predicted from orthologs Q8QGQ8
ZT 3 ZT 18 LD 84.29 pineal glands Predicted from orthologs Q8QGQ8
ZT 23 ZT 11 LD 2.25 spleen Predicted from orthologs Q8QGQ8
CT 4 CT 12 DD2 27 aortic smooth muscle cells Predicted from orthologs O15055
ZT 4 ZT 21 LD 5 human HaCaT keratinocytes Predicted from orthologs O15055
ZT 1 ZT 19 LD 2.67 human hair follicle cells Predicted from orthologs O15055
CT 12 CT 0 LL1 3.43 oral mucosa Predicted from orthologs O15055
CT 3 CT 15 DD2 5 U2OS cells Predicted from orthologs O15055
CT 6 CT 18 DD1 4 SCN Predicted from orthologs O54943
CT 9 CT 3 DD1 3 eye Predicted from orthologs O54943
ZT 19 ZT 7 LD 2.5 amygdala Predicted from orthologs O54943
ZT 12 ZT 4 LD 2 bone Predicted from orthologs O54943
ZT 13 ZT 5 LD 2.4 bone marrow Predicted from orthologs O54943
ZT 18 ZT 6 LD 1.89 brain Predicted from orthologs O54943
ZT 15 ZT 23 LD 3 cortex Predicted from orthologs O54943
ZT 13 ZT 2 LD 10 heart Predicted from orthologs O54943
ZT 13 ZT 1 LD 2.5 hippocampus Predicted from orthologs O54943
ZT 16 ZT 0 LD 25 jejunum Predicted from orthologs O54943
ZT 15 ZT 23 LD 6 kidney Predicted from orthologs O54943
CT 15 CT 3 DD1 4 liver Predicted from orthologs O54943
ZT 16 ZT 4 LD 7 liver Predicted from orthologs O54943
CT 18 CT 6 DD2 10 MEFs Predicted from orthologs O54943
ZT 17 ZT 1 LD 6 megakaryocytes Predicted from orthologs O54943
ZT 18 ZT 6 LD 3 n primary visualcortex (V1) Predicted from orthologs O54943
CT 0 CT 12 DD2 10 NIH-3T3 cells Predicted from orthologs O54943
CT 12 CT 0 DD3 4.79 ovary Predicted from orthologs O54943
ZT 12 ZT 4 LD 5 pituitary gland Predicted from orthologs O54943
CT 12 CT 20 DD3 5 retina Predicted from orthologs O54943
ZT 12 ZT 16 LD 5 retina Predicted from orthologs O54943
CT 12 CT 20 DD3 6 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
ZT 0 ZT 16 LD 2 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
CT 9 CT 21 DD1 6 SCN Predicted from orthologs O54943
CT 8 CT 16 DD1 20 SCN Predicted from orthologs O54943
CT 15 CT 3 DD1 3 skeletal muscle Predicted from orthologs O54943
CT 14 CT 2 DD3 12 suprachiasmatic nucleus (SCN) Predicted from orthologs O54943
ZT 16 ZT 4 LD 9 abdominal adipose tissue Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 anterior cingulate Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 2.05 area postrema Predicted from orthologs Q9Z301
ZT 18 ZT 2 LD 6.38 AV3V Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 14 basolateral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 10 ZT 6 LD 2 caudal ventrolateral medulla Predicted from orthologs Q9Z301
CT 12 CT 8 DD17 4.35 colon Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 3.29 dorsal vagal motor nucleus Predicted from orthologs Q9Z301
ZT 2 ZT 14 LD 1.8 dorsomedial nucleus Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 5.5 entral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 5.7 heart Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 15 hippocampus Predicted from orthologs Q9Z301
ZT 16 ZT 3 LD 57 intestinal jejunal mucosa Predicted from orthologs Q9Z301
CT 16 CT 4 DD17 5 liver Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 8.5 liver Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q9Z301
ZT 0 ZT 12 LD 7 nucleus accumbens shell Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.07 nucleus ambiguus Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.63 paraventricular nucleus Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 4 prefrontal cortex Predicted from orthologs Q9Z301
ZT 12 ZT 8 LD 2.5 PVN Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 rostral agranular insula Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 3.92 SCN Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
Descriptionperiod circadian clock 2 [Source:HGNC Symbol;Acc:HGNC:8846](View all)
Protein Sequence
(Fasta)		 MQMRRSRDQW RAGGRARRAR SRFPLCDSGG SGRRRRRRGL RAGLGGGGGG RGPGERADWP 60
AEGPATAGRL APEPNMNGYV EFAPSAGHPR VEPLDPRPGK APVQEDVDMS SGSSGNEANE 120
NSSMGRESQG SDCDDSGKEL GMLVEPPDAR QGPAAFGLTM AEPASDCLSL ESHSSQQAAK 180
ADVHRELIRT LKELKVHLPA DRKAKGKAST LATLKYALRS VKQVKANEEY YQLLMSSESQ 240
PRGVDVPSYS VEEVESVTSE YVVKNGDMFA VAVSLVTGRI LYISEQVASI FHCKRDAFSD 300
AKFVEFLAPH DVSVFHGCTT PCKLPAWSAC SRGDFTQECT EEKSFFCRVS VGKNHENEIR 360
YHPFRMTPYL AKVRERPGAE SQLSCLLLAE RVHSGYEAPR IPPEKRIFTT THTPNCLFQD 420
VDERAVPLLG YLPQDLIESP VLLQLHPSDR PLMLTIHKKI LQAGGQPFDY SPIRFRARNG 480
EYITLDTSWS SFINPWSRRV SFIIGRHKVR VGPLNEDVFT AHPCAEEKAP HPGVQELTEQ 540
IHRLLLQPVP HSGSSGYGSL GSNGSQEHLL SHTSSSDSNG HEDSRQRRPE ICKTDKAKAR 600
GHHSHGPGEQ KKTCVPDLQS GHAAQERAVP AAEDSSADSA SRAGFPEELA CRPQPACSYQ 660
QISCLDGVIR YLESCSEAAT LKRKCEFPAN IATRKTTVSP GLHATEAASP PEVNSHAEVS 720
AHLSSLALPS KAESVVSLTS QCSYSSTIVH VGDKKPQPEL ETVEDAASGP ESLDWLAGPL 780
SQEREPFKPL GLPKEWLPAH TQKKGRSFLT RPRDGGRLGF PHSPCHHSRQ EPPKGRSGER 840
ASPGLRNASG IDSSWKKAGK NRKLKCKRAK PRDSSESTGS GGPAPPRPPL VGLNATAWSP 900
SATSQSSCPA VPAYSLPVFP APMAPHASLT VPTVPLDAQY QLAVQAPLAP VMALVLPSHP 960
LSLPQAFFPS HAVLQSPAAP ASQPEFARPP CACPATPATP PLASGAGGRA SPPLFQSRGS 1020
SPLQLNLLQL EEAPEGGVGA TGTPGTAATG PDCKPATSRD RQLKAPPAQE EPSDTPNSDA 1080
LSTSSDLLDL LLNDALGSAA GSALSGSSAS DSLGCDASRS GAGSSDTSRS SRYFGSIDSS 1140
ENNHRAARPP RLGAGEQLLR CVLQDPLWLL MADTDDSVMM TYQLPARDAD TVLKEDREQL 1200
RLLQKSQPWL TEGQRQELHE VHPWVQTGGL PAALDVAECV YCANKDRGSL CPPCEEDAGP 1260
GGLGEEEEEG PAPSQAREGQ T 1281
Nucleotide Sequence
(Fasta)		 GCGGAAGGGA CCACTCGGCA GGACGAGAGG GGGGACACGA AAGCGCCGCC TCTTCATTGA 60
GGAACCGAAG CAGTGAACAT GGAGTTCCAT GTGCGTCTTA TGTAAAAAGA GCGACGGGCG 120
CCGCCACCAA TGAACGCGCG GCACCCGCAG GCCCGGCCCC CCCGGTATGC AGATGAGGCG 180
CAGCCGCGAC CAATGGCGCG CCGGGGGGCG GGCGCGGCGC GCGCGGTCAC GTTTTCCACT 240
ATGTGACAGC GGCGGGTCGG GGCGGCGGCG GCGGCGCCGC GGGCTACGCG CTGGTCTCGG 300
CGGCGGCGGC GGCGGGCGCG GGCCGGGCGA GCGCGCGGAC TGGCCGGCGG AGGGTCCGGC 360
GACGGCTGGG CGGTTGGCTC CGGAGCCCAA CATGAACGGC TACGTGGAAT TTGCGCCCAG 420
CGCCGGTCAC CCCCGCGTGG AGCCCCTGGA CCCCCGGCCT GGTAAAGCCC CTGTCCAGGA 480
AGACGTGGAC ATGAGCAGTG GCTCCAGCGG GAATGAAGCC AACGAGAACA GCTCCATGGG 540
GCGGGAGTCT CAGGGCAGCG ACTGTGACGA CAGCGGCAAG GAGCTGGGCA TGCTGGTGGA 600
GCCGCCAGAC GCCCGCCAGG GCCCAGCCGC CTTTGGCCTC ACGATGGCAG AGCCAGCATC 660
TGACTGCCTC TCTCTTGAAT CCCACAGCAG CCAGCAGGCT GCCAAAGCGG ACGTGCACAG 720
AGAGCTGATC AGAACGCTGA AGGAGCTGAA AGTCCACCTG CCCGCAGACA GGAAGGCCAA 780
GGGCAAGGCC AGCACCCTGG CCACCCTGAA GTACGCCCTG CGGAGCGTGA AGCAGGTGAA 840
AGCCAATGAG GAGTACTACC AGCTGCTGAT GTCCAGTGAG AGCCAGCCGC GCGGGGTGGA 900
CGTGCCCTCC TACAGCGTGG AGGAGGTCGA GAGTGTCACC TCCGAGTACG TCGTGAAGAA 960
CGGGGATATG TTTGCTGTGG CTGTGTCCCT GGTTACGGGC AGAATCCTGT ACATCTCGGA 1020
GCAGGTCGCC TCCATCTTCC ACTGCAAGAG AGACGCCTTC AGCGACGCCA AGTTCGTGGA 1080
GTTCCTGGCG CCGCACGACG TCAGCGTGTT CCACGGCTGC ACTACGCCTT GCAAGCTCCC 1140
GGCCTGGAGC GCGTGCAGCC GAGGAGATTT CACCCAGGAA TGCACGGAGG AGAAGTCTTT 1200
CTTCTGCAGG GTCAGCGTCG GGAAGAACCA CGAGAACGAG ATCCGCTACC ATCCCTTCCG 1260
CATGACGCCC TACCTGGCCA AGGTGCGGGA GCGGCCCGGG GCCGAGAGCC AGCTCAGCTG 1320
CCTGCTGCTG GCAGAGAGGG TGCACTCCGG CTACGAAGCT CCTAGAATTC CTCCTGAAAA 1380
GAGAATCTTT ACCACCACTC ACACGCCGAA TTGTTTGTTC CAGGACGTGG ATGAGAGGGC 1440
GGTGCCCCTC CTGGGCTACT TACCCCAGGA CCTGATCGAG AGCCCTGTGC TGCTGCAGCT 1500
GCACCCCAGC GACAGGCCGC TGATGCTCAC CATCCACAAA AAGATCCTGC AGGCCGGCGG 1560
GCAGCCCTTC GACTACTCGC CCATTCGGTT CCGGGCCCGG AACGGCGAGT ACATCACGCT 1620
GGACACCAGC TGGTCCAGCT TCATCAACCC GTGGAGCAGG AGGGTCTCCT TCATCATCGG 1680
GAGGCACAAA GTCAGGGTGG GTCCCCTGAA TGAGGACGTG TTCACGGCCC ACCCGTGTGC 1740
AGAGGAGAAG GCCCCTCACC CTGGCGTTCA GGAGCTCACG GAGCAGATCC ATCGGCTGCT 1800
GCTGCAGCCT GTCCCCCACA GTGGCTCCAG TGGCTACGGG AGCCTGGGCA GCAACGGGTC 1860
CCAGGAGCAC CTGCTGAGCC ACACCTCCTC CAGCGACAGC AATGGCCACG AGGACTCTCG 1920
GCAGAGGAGG CCCGAGATCT GCAAGACTGA CAAGGCCAAA GCCAGAGGCC ACCATTCTCA 1980
CGGGCCTGGA GAGCAAAAGA AAACGTGTGT TCCAGACCTG CAGAGTGGTC ATGCGGCCCA 2040
GGAGAGAGCG GTGCCCGCTG CCGAGGACAG CTCAGCGGAC AGCGCGTCCC GGGCGGGCTT 2100
CCCCGAGGAG CTGGCCTGCA GGCCCCAGCC CGCCTGCTCC TACCAGCAGA TCAGCTGCCT 2160
GGACGGCGTC ATCAGGTACC TGGAGAGCTG CAGTGAGGCC GCCACGCTGA AGAGGAAGTG 2220
CGAGTTCCCC GCGAACATCG CCACCCGCAA GACCACGGTC AGCCCCGGGC TGCACGCCAC 2280
AGAGGCTGCG TCGCCCCCCG AGGTGAACAG CCACGCGGAG GTCAGCGCTC ACCTGAGCTC 2340
GCTGGCGCTG CCCAGCAAGG CGGAGAGCGT GGTGTCCCTC ACCAGCCAGT GCAGCTACAG 2400
CAGCACCATC GTGCACGTCG GGGACAAGAA GCCGCAGCCC GAGCTAGAGA CGGTGGAAGA 2460
CGCTGCGAGT GGGCCCGAGT CCCTGGACTG GCTGGCGGGC CCACTCAGCC AGGAGAGGGA 2520
GCCCTTCAAG CCGCTGGGCC TCCCCAAGGA ATGGCTGCCC GCGCACACGC AAAAGAAAGG 2580
CAGGAGTTTC CTCACAAGGC CCAGGGACGG GGGGCGTCTG GGCTTCCCCC ATTCCCCCTG 2640
CCACCATTCC CGCCAGGAGC CTCCAAAGGG GCGGTCCGGG GAACGAGCCT CCCCCGGACT 2700
AAGGAACGCT TCGGGAATAG ACTCGTCTTG GAAAAAAGCC GGAAAGAACA GGAAACTGAA 2760
GTGTAAACGG GCCAAGCCCC GGGACTCGTC CGAGAGCACA GGGTCTGGGG GGCCTGCGCC 2820
CCCGCGACCG CCACTCGTGG GCCTCAACGC CACTGCCTGG TCCCCCTCGG CCACATCCCA 2880
GTCCAGCTGT CCTGCCGTGC CCGCCTACTC CCTGCCCGTG TTCCCGGCGC CCATGGCTCC 2940
GCACGCCAGC CTTACGGTGC CCACCGTGCC TCTGGACGCC CAGTACCAGC TCGCAGTGCA 3000
GGCCCCGCTG GCCCCCGTCA TGGCCCTCGT GCTCCCCAGC CATCCCCTCT CTCTGCCCCA 3060
GGCCTTCTTC CCCAGCCACG CCGTACTCCA GTCCCCGGCG GCCCCTGCCT CACAGCCGGA 3120
GTTTGCCAGG CCGCCATGTG CTTGTCCGGC CACCCCAGCC ACGCCTCCAT TGGCCTCCGG 3180
GGCGGGGGGC AGGGCCTCCC CCCCGCTGTT CCAGTCCCGC GGCAGCTCAC CCCTGCAGCT 3240
CAACCTGCTG CAGCTGGAAG AGGCCCCCGA GGGTGGTGTG GGGGCCACAG GGACCCCAGG 3300
GACAGCTGCC ACGGGGCCCG ACTGCAAGCC TGCGACGTCT CGGGACCGGC AGCTGAAGGC 3360
ACCTCCAGCC CAGGAGGAGC CCTCGGACAC CCCGAACAGC GACGCCCTCT CCACGTCCAG 3420
CGACCTGCTC GACCTCCTGC TCAACGACGC CCTGGGCTCG GCCGCGGGCT CTGCCCTTTC 3480
CGGGAGCAGC GCCTCGGACT CACTGGGCTG CGACGCCTCC CGGAGCGGGG CAGGCAGCAG 3540
TGACACGAGC CGGAGCAGCA GGTATTTCGG CAGCATCGAC TCCTCCGAGA ATAACCACAG 3600
GGCAGCGAGG CCCCCGCGGC TGGGGGCCGG CGAGCAGCTC CTCAGGTGCG TCCTGCAGGA 3660
CCCCCTCTGG CTGCTGATGG CCGACACGGA CGACAGCGTC ATGATGACCT ACCAGCTGCC 3720
CGCCCGGGAC GCGGACACGG TTCTGAAGGA GGACAGAGAG CAGCTGAGGC TGCTGCAGAA 3780
GTCCCAGCCG TGGCTCACCG AGGGCCAGAG GCAGGAGCTG CACGAGGTCC ACCCGTGGGT 3840
GCAGACGGGC GGCCTGCCTG CGGCGCTGGA CGTGGCGGAA TGTGTTTACT GCGCGAACAA 3900
GGACAGGGGC AGCTTGTGCC CGCCGTGCGA GGAAGACGCT GGCCCTGGGG GCCTCGGCGA 3960
GGAGGAGGAG GAGGGGCCCG CCCCGAGCCA GGCGCGGGAA GGACAAACAT AGCTCCTGGT 4020
GCCCGCCAGC CCCACGGCCA GTTGACCTCC GCGAGACGGG GCCTGCGGGG ACAGGGCGGG 4080
CCCCCACTTC TGCTTTCCGC TGCAGGGACA GACTGTTTCA TGTAGCTTTG TGAAAGGGGG 4140
CTGGGAGCGT TTGTGCTCCA GCCGCGGGCC CGGGTCCGAA GGCTGAGAGG GGTGGGCCCC 4200
GGGGCAGGCC
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-EqC-020992Equus caballus61.39 0.00e+00 1335.1
CGD-GaG-021834Gallus gallus47.6 0.00e+00 966.1
CGD-HoS-021036Homo sapiens (Human)63.65 0.00e+00 1477.2
CGD-MuM-021066Mus musculus (Mouse)61.58 0.00e+00 1391.7
CGD-RaN-022186Rattus norvegicus61.09 0.00e+00 1373.6
Gene Ontology

GO:0005737--cytoplasm
GO:0005634--nucleus
GO:0005515--protein binding
GO:0005654--nucleoplasm