CGDB Gene Information

Tag Content
CGDB ID CGD-TuB-057033
Ensembl Accession ENSTBEP00000005653.1
Protein Name PER2
Ensembl Information ENSTBEG00000006540; ENSTBET00000006564
Organism Tupaia belangeri
NCBI Taxa ID 37347
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 6 ZT 18 LD 5 skeletal muscle Predicted from orthologs F6ZZH0
ZT 21 ZT 9 LD 6 duodenum Predicted from orthologs Q8QGQ8
ZT 2 ZT 18 LD 3.17 embryos Predicted from orthologs Q8QGQ8
ZT 6 ZT 18 LD 8 embryos Predicted from orthologs Q8QGQ8
CT 12 CT 0 DD1 3 granulosa cells Predicted from orthologs Q8QGQ8
ZT 3 ZT 18 LD 84.29 pineal glands Predicted from orthologs Q8QGQ8
ZT 23 ZT 11 LD 2.25 spleen Predicted from orthologs Q8QGQ8
CT 4 CT 12 DD2 27 aortic smooth muscle cells Predicted from orthologs O15055
ZT 4 ZT 21 LD 5 human HaCaT keratinocytes Predicted from orthologs O15055
ZT 1 ZT 19 LD 2.67 human hair follicle cells Predicted from orthologs O15055
CT 12 CT 0 LL1 3.43 oral mucosa Predicted from orthologs O15055
CT 3 CT 15 DD2 5 U2OS cells Predicted from orthologs O15055
CT 6 CT 18 DD1 4 SCN Predicted from orthologs O54943
CT 9 CT 3 DD1 3 eye Predicted from orthologs O54943
ZT 19 ZT 7 LD 2.5 amygdala Predicted from orthologs O54943
ZT 12 ZT 4 LD 2 bone Predicted from orthologs O54943
ZT 13 ZT 5 LD 2.4 bone marrow Predicted from orthologs O54943
ZT 18 ZT 6 LD 1.89 brain Predicted from orthologs O54943
ZT 15 ZT 23 LD 3 cortex Predicted from orthologs O54943
ZT 13 ZT 2 LD 10 heart Predicted from orthologs O54943
ZT 13 ZT 1 LD 2.5 hippocampus Predicted from orthologs O54943
ZT 16 ZT 0 LD 25 jejunum Predicted from orthologs O54943
ZT 15 ZT 23 LD 6 kidney Predicted from orthologs O54943
CT 15 CT 3 DD1 4 liver Predicted from orthologs O54943
ZT 16 ZT 4 LD 7 liver Predicted from orthologs O54943
CT 18 CT 6 DD2 10 MEFs Predicted from orthologs O54943
ZT 17 ZT 1 LD 6 megakaryocytes Predicted from orthologs O54943
ZT 18 ZT 6 LD 3 n primary visualcortex (V1) Predicted from orthologs O54943
CT 0 CT 12 DD2 10 NIH-3T3 cells Predicted from orthologs O54943
CT 12 CT 0 DD3 4.79 ovary Predicted from orthologs O54943
ZT 12 ZT 4 LD 5 pituitary gland Predicted from orthologs O54943
CT 12 CT 20 DD3 5 retina Predicted from orthologs O54943
ZT 12 ZT 16 LD 5 retina Predicted from orthologs O54943
CT 12 CT 20 DD3 6 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
ZT 0 ZT 16 LD 2 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
CT 9 CT 21 DD1 6 SCN Predicted from orthologs O54943
CT 8 CT 16 DD1 20 SCN Predicted from orthologs O54943
CT 15 CT 3 DD1 3 skeletal muscle Predicted from orthologs O54943
CT 14 CT 2 DD3 12 suprachiasmatic nucleus (SCN) Predicted from orthologs O54943
ZT 16 ZT 4 LD 9 abdominal adipose tissue Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 anterior cingulate Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 2.05 area postrema Predicted from orthologs Q9Z301
ZT 18 ZT 2 LD 6.38 AV3V Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 14 basolateral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 10 ZT 6 LD 2 caudal ventrolateral medulla Predicted from orthologs Q9Z301
CT 12 CT 8 DD17 4.35 colon Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 3.29 dorsal vagal motor nucleus Predicted from orthologs Q9Z301
ZT 2 ZT 14 LD 1.8 dorsomedial nucleus Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 5.5 entral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 5.7 heart Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 15 hippocampus Predicted from orthologs Q9Z301
ZT 16 ZT 3 LD 57 intestinal jejunal mucosa Predicted from orthologs Q9Z301
CT 16 CT 4 DD17 5 liver Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 8.5 liver Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q9Z301
ZT 0 ZT 12 LD 7 nucleus accumbens shell Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.07 nucleus ambiguus Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.63 paraventricular nucleus Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 4 prefrontal cortex Predicted from orthologs Q9Z301
ZT 12 ZT 8 LD 2.5 PVN Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 rostral agranular insula Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 3.92 SCN Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
Descriptionperiod circadian clock 2 [Source:HGNC Symbol;Acc:HGNC:8846](View all)
Protein Sequence
(Fasta)		 MNGYVELPPG PSSPTKELAE PTPGQAPLQE DVDMSSGSSG NENSMGQDSQ GSDCDDSRKE 60
LGMLVEPSDA CQSASAFSLM MAKSEHTPPA SGCSSEQSAK ADTHRELVKT LKELKVHLPA 120
DKKAKGKAST LATLKYALRS VKQVKANEEY YQLLMASESH PCGADVPSYS TDEIESVTSE 180
YLVKNPDMFA VAVSLSTGKV LYISDQVASI FHCKRDAFSD AKFVEFLAPH DVSVFHSSTT 240
PYRLPSWSIC GRVDSFTQEC TEEKSFFCRV SVGKSHENEV RYHPFRMTPY LVKVRDRPAA 300
ESQLCCLLLA ERVHSGYEAP RIPPEKRIFT TTHTPNCLFQ DVDERAVPLL GFLPQDLIQT 360
PVLMQLHPSD RPLMLAIHKK XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 420
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 480
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXM 540
QSRSLMETVP AAEKDSSGGG FPEELACKSQ PACSYQQVSC LDSVIRYLES CSEAATLKRK 600
CEFPANIPTP KSSDRRKATL SPGLRSGXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 660
XXXXXXXXXX XXXXXXXXXX XXXMVEDAAS GTESLDCLAG PSLPCGHGQE KEPFQKLGLT 720
KEILAAHTQK EEQSFLHKFR EARRLSLWQP HCHYLQERAK GQGGERXXXX XXXXXXXXXX 780
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 840
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 900
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XSTSRASNHS QPCGSPATLT 960
TTPPAXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 1020
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 1080
XXXXNVDTVL KEDREKLTLL RKAQPRFTES QKRELREVHP WVQTGGLPTA IEVT 1134
Nucleotide Sequence
(Fasta)		 ATGAACGGGT ACGTGGAGCT TCCCCCCGGC CCCAGCAGCC CCACCAAGGA GCTGGCAGAG 60
CCCACGCCTG GCCAGGCCCC ACTCCAGGAA GACGTGGATA TGAGCAGTGG CTCCAGTGGA 120
AACGAAAACT CCATGGGGCA GGACTCGCAG GGCAGTGACT GCGACGACAG CAGGAAGGAG 180
CTGGGGATGC TGGTAGAGCC GTCAGATGCC TGCCAGAGTG CAAGTGCCTT CAGCCTGATG 240
ATGGCCAAGT CTGAACACAC CCCGCCTGCA AGTGGCTGCA GCAGCGAGCA GTCTGCCAAA 300
GCGGACACAC ACAGGGAGCT GGTGAAGACG CTGAAGGAGC TGAAGGTCCA CCTCCCTGCA 360
GACAAGAAGG CCAAGGGCAA GGCCAGCACG CTGGCCACCT TGAAGTACGC CTTGAGGAGC 420
GTGAAGCAGG TGAAAGCGAA CGAGGAGTAC TACCAGCTGC TGATGGCCAG CGAGAGCCAC 480
CCCTGCGGCG CGGACGTGCC TTCTTACTCC ACGGACGAAA TCGAGAGTGT CACCTCCGAG 540
TACCTCGTGA AGAATCCGGA CATGTTTGCC GTGGCTGTGT CCCTGAGTAC TGGGAAGGTC 600
CTGTACATCT CTGACCAGGT GGCGTCCATA TTCCACTGTA AGAGAGACGC CTTCAGCGAT 660
GCCAAGTTCG TGGAGTTCCT GGCCCCCCAC GACGTCAGCG TGTTCCACAG CTCCACCACG 720
CCCTACAGGC TCCCGTCCTG GAGCATCTGC GGCCGAGTCG ACTCTTTTAC TCAAGAATGC 780
ACGGAGGAGA AGTCTTTCTT TTGCCGCGTC AGTGTGGGGA AGAGCCACGA GAACGAGGTT 840
CGCTATCACC CCTTCCGCAT GACGCCCTAC CTGGTCAAGG TCCGGGACCG GCCTGCTGCC 900
GAGAGCCAGC TCTGCTGCCT CCTGCTGGCG GAGAGGGTGC ACTCCGGCTA TGAAGCTCCT 960
CGAATTCCTC CTGAAAAGCG AATTTTTACG ACAACACATA CACCGAATTG TTTGTTCCAG 1020
GACGTGGACG AGAGGGCCGT CCCCCTCCTG GGCTTCCTCC CTCAGGACCT GATCCAGACG 1080
CCTGTGCTCA TGCAGCTTCA CCCCAGCGAC AGGCCCCTGA TGCTCGCCAT CCACAAAAAG 1140
ANNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1200
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1260
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1320
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1380
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1440
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1500
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1560
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNAAATG 1620
CAAAGCCGTT CCTTGATGGA AACTGTCCCT GCAGCGGAGA AGGACAGCTC GGGGGGCGGC 1680
TTCCCCGAGG AGCTGGCCTG CAAAAGTCAG CCTGCCTGCT CCTACCAGCA GGTCAGCTGC 1740
CTGGACAGCG TCATCAGGTA CCTGGAGAGC TGCAGTGAGG CGGCCACGCT CAAGAGGAAG 1800
TGTGAGTTCC CAGCGAACAT CCCCACACCG AAGTCCAGCG ATAGGCGGAA GGCCACGCTC 1860
AGCCCTGGGC TACGCTCTGG AGNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1920
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1980
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2040
NNNNNNNAGA TGGTGGAAGA CGCTGCCAGT GGGACTGAGT CCCTGGACTG TCTGGCAGGC 2100
CCCTCCCTGC CCTGCGGCCA CGGCCAGGAG AAGGAGCCCT TCCAGAAGCT GGGCCTCACC 2160
AAGGAGATCC TGGCCGCGCA CACCCAGAAG GAGGAGCAGA GCTTCCTGCA CAAGTTCAGG 2220
GAGGCCAGGA GGCTCAGCCT CTGGCAGCCC CACTGCCATT ACCTGCAAGA GAGGGCCAAG 2280
GGCCAGGGCG GCGAGCGAGN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2340
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2400
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2460
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2520
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2580
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2640
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2700
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2760
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2820
NAATCCACCA GCCGGGCCTC GAACCACAGT CAGCCATGTG GGAGTCCAGC CACCTTAACC 2880
ACGACACCTC CGGCCNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2940
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 3000
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 3060
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 3120
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 3180
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 3240
NNNNNNNNNN NAAATGTAGA TACGGTTTTG AAGGAGGACA GAGAGAAGCT AACGCTCCTG 3300
CGGAAAGCCC AGCCCCGGTT CACGGAGTCG CAGAAGCGGG AGCTACGTGA GGTCCACCCG 3360
TGGGTGCAGA CGGGCGGCCT GCCCACGGCT ATCGAGGTGA CG 3402
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-EqC-020992Equus caballus86.36 6.00e-156 548.9
CGD-GaG-021834Gallus gallus71.91 8.00e-137 485
CGD-HoS-021036Homo sapiens (Human)78.91 1.00e-175 615.5
CGD-MuM-021066Mus musculus (Mouse)75.39 1.00e-164 578.6
CGD-RaN-022186Rattus norvegicus74.08 2.00e-162 570.5
Gene Ontology

GO:0005737--cytoplasm
GO:0005634--nucleus
GO:0005515--protein binding
GO:0005654--nucleoplasm