CGDB Gene Information

Tag Content
CGDB ID CGD-PaT-055402
Ensembl Accession ENSPTRP00000040071.5
Protein Name PER2
Ensembl Information ENSPTRG00000013092; ENSPTRT00000045293
Organism Pan troglodytes
NCBI Taxa ID 9598
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 6 ZT 18 LD 5 skeletal muscle Predicted from orthologs F6ZZH0
ZT 21 ZT 9 LD 6 duodenum Predicted from orthologs Q8QGQ8
ZT 2 ZT 18 LD 3.17 embryos Predicted from orthologs Q8QGQ8
ZT 6 ZT 18 LD 8 embryos Predicted from orthologs Q8QGQ8
CT 12 CT 0 DD1 3 granulosa cells Predicted from orthologs Q8QGQ8
ZT 3 ZT 18 LD 84.29 pineal glands Predicted from orthologs Q8QGQ8
ZT 23 ZT 11 LD 2.25 spleen Predicted from orthologs Q8QGQ8
CT 4 CT 12 DD2 27 aortic smooth muscle cells Predicted from orthologs O15055
ZT 4 ZT 21 LD 5 human HaCaT keratinocytes Predicted from orthologs O15055
ZT 1 ZT 19 LD 2.67 human hair follicle cells Predicted from orthologs O15055
CT 12 CT 0 LL1 3.43 oral mucosa Predicted from orthologs O15055
CT 3 CT 15 DD2 5 U2OS cells Predicted from orthologs O15055
CT 6 CT 18 DD1 4 SCN Predicted from orthologs O54943
CT 9 CT 3 DD1 3 eye Predicted from orthologs O54943
ZT 19 ZT 7 LD 2.5 amygdala Predicted from orthologs O54943
ZT 12 ZT 4 LD 2 bone Predicted from orthologs O54943
ZT 13 ZT 5 LD 2.4 bone marrow Predicted from orthologs O54943
ZT 18 ZT 6 LD 1.89 brain Predicted from orthologs O54943
ZT 15 ZT 23 LD 3 cortex Predicted from orthologs O54943
ZT 13 ZT 2 LD 10 heart Predicted from orthologs O54943
ZT 13 ZT 1 LD 2.5 hippocampus Predicted from orthologs O54943
ZT 16 ZT 0 LD 25 jejunum Predicted from orthologs O54943
ZT 15 ZT 23 LD 6 kidney Predicted from orthologs O54943
CT 15 CT 3 DD1 4 liver Predicted from orthologs O54943
ZT 16 ZT 4 LD 7 liver Predicted from orthologs O54943
CT 18 CT 6 DD2 10 MEFs Predicted from orthologs O54943
ZT 17 ZT 1 LD 6 megakaryocytes Predicted from orthologs O54943
ZT 18 ZT 6 LD 3 n primary visualcortex (V1) Predicted from orthologs O54943
CT 0 CT 12 DD2 10 NIH-3T3 cells Predicted from orthologs O54943
CT 12 CT 0 DD3 4.79 ovary Predicted from orthologs O54943
ZT 12 ZT 4 LD 5 pituitary gland Predicted from orthologs O54943
CT 12 CT 20 DD3 5 retina Predicted from orthologs O54943
ZT 12 ZT 16 LD 5 retina Predicted from orthologs O54943
CT 12 CT 20 DD3 6 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
ZT 0 ZT 16 LD 2 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
CT 9 CT 21 DD1 6 SCN Predicted from orthologs O54943
CT 8 CT 16 DD1 20 SCN Predicted from orthologs O54943
CT 15 CT 3 DD1 3 skeletal muscle Predicted from orthologs O54943
CT 14 CT 2 DD3 12 suprachiasmatic nucleus (SCN) Predicted from orthologs O54943
ZT 16 ZT 4 LD 9 abdominal adipose tissue Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 anterior cingulate Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 2.05 area postrema Predicted from orthologs Q9Z301
ZT 18 ZT 2 LD 6.38 AV3V Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 14 basolateral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 10 ZT 6 LD 2 caudal ventrolateral medulla Predicted from orthologs Q9Z301
CT 12 CT 8 DD17 4.35 colon Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 3.29 dorsal vagal motor nucleus Predicted from orthologs Q9Z301
ZT 2 ZT 14 LD 1.8 dorsomedial nucleus Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 5.5 entral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 5.7 heart Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 15 hippocampus Predicted from orthologs Q9Z301
ZT 16 ZT 3 LD 57 intestinal jejunal mucosa Predicted from orthologs Q9Z301
CT 16 CT 4 DD17 5 liver Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 8.5 liver Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q9Z301
ZT 0 ZT 12 LD 7 nucleus accumbens shell Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.07 nucleus ambiguus Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.63 paraventricular nucleus Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 4 prefrontal cortex Predicted from orthologs Q9Z301
ZT 12 ZT 8 LD 2.5 PVN Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 rostral agranular insula Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 3.92 SCN Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
Descriptionperiod circadian clock 2 [Source:HGNC Symbol;Acc:HGNC:8846](View all)
Protein Sequence
(Fasta)		 DSFTQECMEE KSFFCRVSVR KSHENEIRYH PFRMTPYLVK VRDQQGAESQ LCCLLLAERV 60
HSGYEAPRIP PEKRIFTTTH TPNCLFQDVD ERAVPLLGYL PQDLIETPVL VQLHPSDRPL 120
MLAIHKKILQ SGGQPFDYSP IRFRARNGEY ITLDTSWSSF INPWSRKISF IIGRHKVRVG 180
PLNEDVFAAH PCTEEKALHP SIQELTEQIH RLLLQPVPHS GSSGYGSLGS NGSHEHLMSQ 240
TSSSDSNGHE DSRRRRAEIC KNGNKTKNRS HYSHESGEQK KKSVAEMQTN PPAEKKAVPA 300
MEKDSLGVSF PEELACKNQP TCSYQQISCL DSVIRYLESC NEAATLKRKC EFPANVPALR 360
SSDKRKATVS PGPHAGEAEP PSRVNSRTGV GTHLTSLALP GKAESVASLT SQCSYSSTIV 420
HVGDKKPQPE LEMVEDAASG PESLDCLAGP ALACGLSQEK EPFKKLGLTK EVLAAHTQKE 480
EQSFLQKFKE IRKLSIFQSH CHYYLQERSK GQPSERTAPG LRNTSGIDSP WKKTGKNRKL 540
KSKRVKPRDS SESTGSGGPV SARPPLVGLN ATAWSPSDTS QSSCPAVPFP APVPAAYSLP 600
VFPAPGTVAA PPAPPHASFT VPAVPVDLQH QFAVQPPPFP APLAPVMAFM LPSYSFPSGT 660
PNLPQAFFPS QPQFPSHPTL TSEMASASQP EFPSRTSIPR QPCACPATQA TPPSAMGRAS 720
PPLFQSRSSS PLQLNLLQLE EAPEGGTGAM GTTGATETAA VGADCKPGTS RDQQPKAPLT 780
RDEPSDTQNS DALSTSSGLL NLLLNEDLCS ASGSAASESL GSGSLGCDAS PSGAGSSDTS 840
HTSKYFGSID SSENNHKAKM NTGMEESEHF IKCVLQDPIW LLMADADSSV MMTYQLPSRN 900
LEAVLKEDRE KLKLLQKLQP RFTESQKQEL REVHQWMQTG GLPAAIDVAE CVYCENKEKG 960
NICIPYEEDI PSLGLSEVLD TKEDENGSPL NHRIEEQT 998
Nucleotide Sequence
(Fasta)		 GATTCTTTTA CTCAAGAATG CATGGAGGAG AAATCTTTCT TTTGCCGTGT CAGTGTCAGG 60
AAAAGCCACG AGAATGAAAT CCGCTACCAC CCCTTCCGCA TGACGCCCTA CCTGGTCAAG 120
GTGCGGGACC AACAAGGTGC TGAGAGTCAG CTTTGCTGCC TTCTGCTGGC AGAGAGAGTG 180
CACTCTGGTT ATGAAGCCCC TAGAATTCCT CCTGAAAAGA GAATTTTTAC AACCACCCAT 240
ACACCAAATT GTTTGTTCCA GGATGTGGAT GAAAGGGCGG TCCCTCTCCT GGGCTACCTA 300
CCTCAGGACC TGATTGAAAC CCCAGTGCTC GTGCAGCTCC ACCCTAGTGA CAGGCCCTTG 360
ATGCTGGCCA TCCACAAAAA GATCCTCCAG TCAGGCGGGC AGCCTTTCGA CTATTCTCCC 420
ATTCGGTTTC GCGCCCGGAA CGGAGAGTAC ATCACGCTGG ACACCAGCTG GTCCAGCTTC 480
ATCAACCCAT GGAGCAGGAA AATCTCCTTC ATCATTGGGA GGCACAAAGT CAGGGTGGGC 540
CCTTTGAATG AGGACGTGTT TGCAGCCCAC CCCTGCACAG AGGAGAAGGC CCTGCACCCC 600
AGCATTCAGG AGCTCACAGA GCAGATCCAC CGGCTCCTGC TGCAGCCCGT CCCCCACAGC 660
GGCTCCAGCG GCTACGGGAG TCTGGGCAGC AACGGGTCCC ACGAGCACCT TATGAGCCAG 720
ACCTCCTCCA GCGACAGCAA CGGCCATGAG GACTCACGCC GGAGGAGAGC CGAAATTTGT 780
AAAAATGGTA ACAAGACCAA AAATAGAAGT CATTATTCTC ATGAATCTGG AGAACAAAAG 840
AAAAAATCCG TTGCAGAAAT GCAAACTAAT CCCCCAGCTG AGAAGAAAGC TGTCCCTGCC 900
ATGGAAAAGG ACAGCCTGGG GGTCAGCTTC CCCGAGGAGT TGGCCTGCAA GAACCAGCCC 960
ACCTGCTCCT ACCAGCAGAT CAGCTGCTTG GACAGCGTCA TCAGGTACTT GGAGAGCTGC 1020
AATGAGGCTG CCACCCTGAA GAGGAAATGC GAGTTCCCAG CAAACGTCCC AGCGCTAAGG 1080
TCCAGTGATA AGCGGAAGGC CACAGTCAGC CCAGGGCCAC ACGCTGGAGA GGCAGAGCCG 1140
CCCTCCAGGG TGAACAGCCG CACGGGAGTA GGCACGCACC TGACCTCGCT GGCACTGCCG 1200
GGCAAGGCAG AGAGTGTGGC GTCGCTCACC AGCCAGTGCA GCTACAGCAG CACCATCGTC 1260
CATGTGGGAG ACAAGAAGCC GCAGCCGGAG TTAGAGATGG TGGAAGATGC TGCGAGTGGG 1320
CCAGAATCCC TGGACTGCCT GGCGGGCCCT GCCCTGGCCT GTGGTCTCAG CCAAGAGAAG 1380
GAGCCCTTCA AGAAGCTGGG CCTCACCAAG GAGGTACTCG CTGCACACAC ACAGAAGGAG 1440
GAGCAGAGCT TCCTGCAGAA GTTCAAAGAA ATAAGAAAAC TCAGCATTTT CCAGTCCCAC 1500
TGCCATTACT ACTTGCAAGA AAGATCCAAG GGGCAGCCAA GTGAACGAAC TGCCCCTGGA 1560
CTAAGAAATA CTTCCGGAAT AGATTCACCT TGGAAAAAAA CAGGAAAGAA CAGAAAATTG 1620
AAGTCCAAGC GGGTCAAACC TCGAGACTCA TCTGAGAGCA CTGGATCTGG GGGGCCCGTG 1680
TCCGCCCGGC CCCCGCTGGT GGGCTTGAAC GCCACAGCCT GGTCACCCTC AGACACGTCC 1740
CAGTCCAGCT GCCCAGCCGT GCCCTTTCCC GCCCCAGTGC CAGCAGCTTA TTCACTGCCC 1800
GTGTTTCCAG CGCCAGGGAC TGTGGCAGCA CCCCCGGCAC CTCCCCACGC CAGCTTCACA 1860
GTGCCTGCTG TGCCCGTGGA CCTCCAGCAC CAGTTTGCAG TCCAGCCCCC ACCTTTCCCT 1920
GCCCCTTTGG CGCCTGTCAT GGCATTCATG CTACCCAGTT ATTCCTTCCC CTCGGGGACC 1980
CCAAACCTGC CCCAGGCCTT CTTCCCCAGC CAGCCTCAGT TTCCGAGCCA CCCCACACTC 2040
ACATCCGAGA TGGCCTCTGC CTCACAGCCT GAGTTCCCCA GCCGGACCTC GATCCCCAGA 2100
CAGCCATGTG CTTGTCCAGC CACCCAGGCC ACCCCACCAT CGGCCATGGG TAGGGCCTCC 2160
CCACCGCTCT TTCAGTCCCG CAGCAGCTCG CCCCTGCAGC TCAACCTGCT GCAGCTGGAG 2220
GAAGCCCCTG AGGGTGGCAC TGGAGCCATG GGGACCACAG GGGCCACAGA GACAGCAGCT 2280
GTAGGGGCGG ACTGCAAACC TGGCACTTCT CGGGACCAGC AGCCGAAGGC GCCTCTGACC 2340
CGTGATGAAC CCTCAGACAC ACAGAACAGT GACGCCCTTT CCACGTCAAG CGGCCTCCTA 2400
AACCTCCTGC TGAATGAGGA CCTCTGCTCA GCCTCGGGCT CTGCTGCTTC GGAGTCTCTG 2460
GGCTCTGGCT CACTGGGCTG CGACGCCTCC CCGAGTGGGG CAGGCAGTAG TGACACAAGT 2520
CATACCAGCA AATATTTTGG AAGCATTGAC TCCTCAGAGA ATAATCACAA AGCAAAAATG 2580
AACACTGGTA TGGAAGAAAG TGAGCATTTC ATTAAGTGCG TCCTGCAGGA TCCCATCTGG 2640
CTGCTGATGG CAGATGCGGA CAGCAGCGTC ATGATGACGT ACCAGCTGCC TTCCCGAAAT 2700
TTAGAAGCGG TTTTGAAGGA GGACAGAGAG AAGCTGAAGC TCCTACAGAA ACTCCAGCCC 2760
AGGTTCACGG AGAGTCAGAA GCAGGAGCTG CGCGAGGTCC ACCAGTGGAT GCAGACGGGC 2820
GGCCTGCCCG CAGCCATCGA CGTGGCAGAA TGTGTTTACT GTGAAAACAA GGAAAAAGGT 2880
AATATTTGCA TACCATATGA AGAAGATATT CCTTCTCTGG GACTCAGCGA AGTGTTGGAC 2940
ACCAAAGAAG ACGAAAATGG ATCCCCCTTG AATCACAGGA TCGAAGAGCA GACG 2994
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-EqC-020992Equus caballus65.46 0.00e+00 1280
CGD-GaG-021834Gallus gallus64.17 0.00e+00 726.5
CGD-HoS-021036Homo sapiens (Human)82.87 0.00e+00 1628.2
CGD-MuM-021066Mus musculus (Mouse)64.31 0.00e+00 1232.6
CGD-RaN-022186Rattus norvegicus63.52 0.00e+00 1221.5
Gene Ontology

GO:0005737--cytoplasm
GO:0005634--nucleus
GO:0005515--protein binding
GO:0005654--nucleoplasm