CGDB Gene Information

Tag Content
CGDB ID CGD-TaR-049995
Ensembl Accession ENSTRUP00000016744.1
Protein Name PER2 (1 of many)
Ensembl Information ENSTRUG00000006817; ENSTRUT00000016817
Organism Takifugu rubripes
NCBI Taxa ID 31033
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 21 ZT 9 LD 6 duodenum Predicted from orthologs Q8QGQ8
ZT 2 ZT 18 LD 3.17 embryos Predicted from orthologs Q8QGQ8
ZT 6 ZT 18 LD 8 embryos Predicted from orthologs Q8QGQ8
CT 12 CT 0 DD1 3 granulosa cells Predicted from orthologs Q8QGQ8
ZT 3 ZT 18 LD 84.29 pineal glands Predicted from orthologs Q8QGQ8
ZT 23 ZT 11 LD 2.25 spleen Predicted from orthologs Q8QGQ8
CT 4 CT 12 DD2 27 aortic smooth muscle cells Predicted from orthologs O15055
ZT 4 ZT 21 LD 5 human HaCaT keratinocytes Predicted from orthologs O15055
ZT 1 ZT 19 LD 2.67 human hair follicle cells Predicted from orthologs O15055
CT 12 CT 0 LL1 3.43 oral mucosa Predicted from orthologs O15055
CT 3 CT 15 DD2 5 U2OS cells Predicted from orthologs O15055
CT 6 CT 18 DD1 4 SCN Predicted from orthologs O54943
CT 9 CT 3 DD1 3 eye Predicted from orthologs O54943
ZT 19 ZT 7 LD 2.5 amygdala Predicted from orthologs O54943
ZT 12 ZT 4 LD 2 bone Predicted from orthologs O54943
ZT 13 ZT 5 LD 2.4 bone marrow Predicted from orthologs O54943
ZT 18 ZT 6 LD 1.89 brain Predicted from orthologs O54943
ZT 15 ZT 23 LD 3 cortex Predicted from orthologs O54943
ZT 13 ZT 2 LD 10 heart Predicted from orthologs O54943
ZT 13 ZT 1 LD 2.5 hippocampus Predicted from orthologs O54943
ZT 16 ZT 0 LD 25 jejunum Predicted from orthologs O54943
ZT 15 ZT 23 LD 6 kidney Predicted from orthologs O54943
CT 15 CT 3 DD1 4 liver Predicted from orthologs O54943
ZT 16 ZT 4 LD 7 liver Predicted from orthologs O54943
CT 18 CT 6 DD2 10 MEFs Predicted from orthologs O54943
ZT 17 ZT 1 LD 6 megakaryocytes Predicted from orthologs O54943
ZT 18 ZT 6 LD 3 n primary visualcortex (V1) Predicted from orthologs O54943
CT 0 CT 12 DD2 10 NIH-3T3 cells Predicted from orthologs O54943
CT 12 CT 0 DD3 4.79 ovary Predicted from orthologs O54943
ZT 12 ZT 4 LD 5 pituitary gland Predicted from orthologs O54943
CT 12 CT 20 DD3 5 retina Predicted from orthologs O54943
ZT 12 ZT 16 LD 5 retina Predicted from orthologs O54943
CT 12 CT 20 DD3 6 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
ZT 0 ZT 16 LD 2 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
CT 9 CT 21 DD1 6 SCN Predicted from orthologs O54943
CT 8 CT 16 DD1 20 SCN Predicted from orthologs O54943
CT 15 CT 3 DD1 3 skeletal muscle Predicted from orthologs O54943
CT 14 CT 2 DD3 12 suprachiasmatic nucleus (SCN) Predicted from orthologs O54943
ZT 16 ZT 4 LD 9 abdominal adipose tissue Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 anterior cingulate Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 2.05 area postrema Predicted from orthologs Q9Z301
ZT 18 ZT 2 LD 6.38 AV3V Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 14 basolateral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 10 ZT 6 LD 2 caudal ventrolateral medulla Predicted from orthologs Q9Z301
CT 12 CT 8 DD17 4.35 colon Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 3.29 dorsal vagal motor nucleus Predicted from orthologs Q9Z301
ZT 2 ZT 14 LD 1.8 dorsomedial nucleus Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 5.5 entral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 5.7 heart Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 15 hippocampus Predicted from orthologs Q9Z301
ZT 16 ZT 3 LD 57 intestinal jejunal mucosa Predicted from orthologs Q9Z301
CT 16 CT 4 DD17 5 liver Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 8.5 liver Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q9Z301
ZT 0 ZT 12 LD 7 nucleus accumbens shell Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.07 nucleus ambiguus Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.63 paraventricular nucleus Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 4 prefrontal cortex Predicted from orthologs Q9Z301
ZT 12 ZT 8 LD 2.5 PVN Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 rostral agranular insula Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 3.92 SCN Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
Descriptionperiod circadian clock 2 [Source:HGNC Symbol;Acc:HGNC:8846](View all)
Protein Sequence
(Fasta)		 LESELGLASE GSDSSHEHAA SHDNRKRTHT PLHEDVEMGG SGLSGSGIES PSNDSHGRES 60
HGNESVGSSN GNGKDSALLE SSGSNKSPSP PSSSNAFSLV SSEQDNPSTS GCSSEQSAKA 120
KTQKELFKTL KELKMHLPSE KRSKGKSSTI NTLKYALRCV KQVKANEEYY QMLMINDSQP 180
PGFDVSSYTI EEINSITSEY TLKNTDIFAV AVSLITGKIV YISEQAASIL NCKREVFHNA 240
KFVEFLTPQD VSVFYSFTTP YRLPSWSMCT GAESSPTECM QEKSFFCRIS GGKEREGDLQ 300
YYPFRMTPYL MKVQDAELNE EQFCCLLLAE RVHSGYEAPR IPPDKRIFTT THTPNCVFQD 360
VDERAVPLLG YLPQDLIGTP VLLNLHPSDR PLMLAVHRKI LQYAGQPFDH SSIRFFARNG 420
EYITVDSSWS SFVNPWSRKV SFVIGRHKVR MGPVNEDVFA APPFHGGKIM DSDIQEISEQ 480
IHRLLLQPIH NMGSSGYGSH GSNGSHEQQV SISSSSENGN AGRTTEETGK AKPTRTFQEI 540
CKGVHMLKNQ DSKLEQKKTS DTHPQKGSVL RPKDALAPLQ VRDSTAGSLE DFPCKDHTVH 600
SYQQISCLDS VIRYLESCNI PVTVKRKYQF SSNTTSSNSD DDPLMLDSQP GLSNIKDPKK 660
PPSGAAAVVG GPLAPLSLPS KAESVVSITS QCSYSSTIVH VGDKKPQPES EIIEDVAESP 720
APSALPISVV SPPSQEKEAY KRLGLTKQVL AAHTQKEEQA FLTRCRELIN TRTFQKDCST 780
YLHKQRGPTI VEESAGPRGA TKQGATRPET TVKRGIRNRK SKKARMKHPD SSDSTVSNRK 840
PRPPLQGLNQ TSWSPSEASQ SAFNVSYPTM VPTYPLYPPA PAAPAQAPLP DPSISAGYGD 900
AQSTQATPNA AAFPAPIVTP VVALVLPNYL FSQMGQQPFQ TAQTPYTTPQ PFQTPQTAYT 960
SQTPFAAQPS FPVQTQFVAQ TPYPAQPFPY SLASEAPKSV VRDGVASRSS TPASGAREPT 1020
TSPPLFESRC SSPLQLNLLS MEEGHRSIER QDSTAPSAGG QGNGTAAGSG SVVTTGEKNR 1080
GAAKTENHQQ VESPGEGAHS DGNSSSCDLL DILLQEQEDS HSGTGSATSG SMGSGSGSGS 1140
GSGSGSGSGS GCGTSASGAS GSSNTSKYFG SVDSLEHDHK AKVKGKTRCE AEGKHFIKYV 1200
LQEPLWLLMA NADDKVMMTY QMPSRDIQKV LREDKERLRQ MQKSQPHFSS DQRRELVEEH 1260
PWMRRGGLPA AINVKDCVYC EDAAAAPIEE DLPDMDMGEL GEETSQESQN KQSQSEKPPS 1320
Nucleotide Sequence
(Fasta)		 CTGGAGTCGG AGCTGGGGTT GGCATCGGAG GGGAGCGACA GCAGCCACGA GCACGCGGCG 60
TCGCACGACA ACAGGAAGCG CACGCACACA CCCTTACACG AGGATGTAGA GATGGGTGGC 120
AGCGGTTTGA GTGGGAGCGG GATAGAATCC CCCAGCAACG ACTCGCACGG CAGAGAGTCC 180
CACGGCAATG AGTCTGTGGG CAGCTCCAAC GGCAATGGCA AAGATTCCGC CCTCCTGGAG 240
TCTTCGGGGA GCAACAAGAG CCCCTCACCG CCAAGCAGCT CAAACGCCTT CAGCCTTGTG 300
AGCTCGGAGC AGGATAACCC CTCCACCAGC GGCTGCAGCA GCGAACAGTC GGCTAAAGCA 360
AAGACCCAGA AGGAGCTCTT CAAGACCCTA AAGGAGCTGA AGATGCACTT GCCTTCAGAA 420
AAAAGGAGCA AGGGAAAGTC GAGCACCATC AACACGCTCA AATATGCACT GCGATGTGTT 480
AAACAAGTCA AAGCTAATGA AGAATATTAC CAGATGCTGA TGATTAATGA CAGTCAGCCA 540
CCAGGCTTTG ATGTCTCATC CTACACCATT GAAGAAATCA ACAGCATCAC CTCTGAATAC 600
ACCCTCAAAA ACACTGATAT CTTTGCCGTG GCCGTCTCCC TCATCACGGG GAAGATCGTT 660
TACATCTCGG AACAGGCGGC GTCCATCTTG AACTGCAAGC GAGAAGTGTT CCACAATGCC 720
AAGTTTGTGG AGTTCCTGAC GCCCCAGGAC GTTAGCGTGT TCTACAGCTT CACCACGCCG 780
TACCGACTGC CCTCGTGGAG CATGTGCACT GGCGCAGAGT CCTCTCCCAC GGAGTGCATG 840
CAGGAGAAAT CCTTCTTTTG CCGCATCAGT GGTGGCAAGG AGCGCGAGGG GGATCTTCAG 900
TACTATCCTT TCCGCATGAC ACCGTACCTG ATGAAAGTCC AGGATGCTGA GCTGAACGAG 960
GAACAGTTTT GCTGCCTCTT GCTTGCTGAG AGGGTGCACT CTGGATATGA AGCTCCCAGA 1020
ATCCCCCCTG ACAAGCGCAT CTTCACCACA ACACACACAC CTAACTGTGT GTTCCAGGAC 1080
GTGGATGAAA GGGCCGTGCC TCTGCTGGGG TACCTCCCTC AGGATCTGAT TGGGACCCCT 1140
GTGCTACTCA ACCTGCACCC CAGCGACCGA CCACTGATGC TCGCTGTTCA TCGCAAGATT 1200
CTGCAGTATG CGGGGCAGCC CTTCGATCAC TCCTCCATCC GTTTCTTTGC GAGAAACGGC 1260
GAGTACATCA CCGTTGACAG CAGCTGGTCC AGCTTTGTCA ACCCGTGGAG TCGCAAAGTC 1320
TCCTTTGTCA TCGGCAGGCA CAAAGTGCGC ATGGGTCCTG TGAATGAAGA CGTTTTTGCT 1380
GCCCCACCAT TCCATGGGGG GAAGATTATG GACTCGGACA TCCAGGAAAT CAGTGAACAG 1440
ATTCACAGGC TTCTACTACA ACCAATCCAT AACATGGGCT CCAGCGGTTA CGGCAGCCAC 1500
GGAAGCAACG GTTCCCATGA GCAGCAGGTG AGCATCAGCT CATCCAGTGA GAATGGGAAC 1560
GCAGGAAGGA CAACAGAAGA AACGGGCAAG GCCAAGCCCA CCAGGACATT CCAGGAGATT 1620
TGTAAAGGGG TCCATATGCT TAAGAACCAG GACTCCAAGC TTGAGCAGAA GAAGACCTCT 1680
GACACACATC CTCAAAAGGG TTCAGTACTG CGGCCAAAGG ACGCGCTGGC GCCCCTGCAG 1740
GTCAGAGACA GTACTGCGGG TAGCCTGGAG GACTTCCCAT GCAAAGACCA CACTGTTCAC 1800
TCCTATCAGC AGATCAGCTG CCTTGACAGT GTTATTAGGT ATCTGGAGAG TTGTAATATT 1860
CCTGTCACAG TGAAGAGAAA GTACCAGTTC TCTTCCAATA CGACCTCGTC CAACTCTGAT 1920
GATGACCCTT TAATGCTGGA TTCCCAACCT GGCCTGTCAA ACATAAAGGA CCCAAAGAAA 1980
CCTCCCTCTG GTGCAGCTGC TGTGGTGGGA GGACCCCTGG CACCTCTTTC ACTGCCCAGC 2040
AAAGCTGAAA GTGTTGTTTC CATCACCTCA CAGTGCAGCT ATAGCAGCAC CATCGTCCAC 2100
GTGGGAGACA AGAAGCCTCA GCCAGAGTCT GAGATCATCG AGGATGTGGC AGAAAGCCCC 2160
GCACCCTCCG CTCTGCCTAT CAGCGTGGTG TCCCCACCCA GCCAGGAGAA GGAGGCCTAC 2220
AAGCGCCTGG GGTTAACGAA GCAGGTTCTG GCCGCACACA CCCAGAAAGA AGAGCAGGCC 2280
TTCCTAACCC GCTGCCGGGA GCTCATCAAC ACCAGAACAT TCCAGAAGGA CTGTTCCACG 2340
TATCTGCACA AGCAGAGAGG GCCGACCATT GTTGAAGAAT CGGCCGGACC ACGAGGCGCT 2400
ACCAAACAGG GCGCCACCAG GCCAGAGACC ACCGTTAAGA GAGGCATCCG CAACAGGAAA 2460
TCAAAGAAGG CACGAATGAA GCATCCCGAT TCATCAGACA GCACCGTGTC GAACCGTAAA 2520
CCCCGGCCGC CTCTCCAGGG TCTCAACCAA ACGTCCTGGT CTCCATCGGA AGCATCCCAG 2580
TCAGCTTTTA ACGTCTCCTA TCCGACCATG GTGCCTACCT ATCCCCTCTA CCCTCCAGCG 2640
CCTGCTGCCC CCGCTCAGGC CCCCCTCCCA GACCCATCCA TTTCTGCAGG CTATGGAGAT 2700
GCCCAAAGCA CCCAAGCCAC ACCTAACGCA GCTGCATTTC CAGCCCCCAT TGTTACACCT 2760
GTCGTGGCTC TTGTGCTACC CAATTACCTC TTCTCCCAAA TGGGACAGCA GCCGTTCCAA 2820
ACGGCTCAGA CCCCCTACAC CACACCACAG CCTTTCCAGA CCCCTCAGAC GGCGTACACC 2880
TCTCAGACAC CCTTTGCTGC ACAACCCTCT TTCCCAGTCC AGACCCAGTT TGTAGCTCAA 2940
ACCCCATATC CTGCTCAGCC TTTCCCTTAT AGCCTAGCCT CCGAAGCCCC CAAATCAGTG 3000
GTCCGTGATG GGGTGGCATC ACGCTCCTCG ACCCCAGCAT CTGGAGCGAG GGAACCGACG 3060
ACGTCGCCAC CTCTGTTTGA GTCACGGTGC AGCTCCCCGC TTCAGCTCAA TCTGCTGAGC 3120
ATGGAGGAGG GACACCGCTC GATAGAACGT CAGGACAGCA CAGCGCCCTC TGCAGGAGGT 3180
CAGGGCAACG GCACAGCTGC AGGATCTGGG TCAGTCGTAA CAACAGGGGA GAAAAACAGA 3240
GGAGCAGCCA AAACTGAAAA CCACCAACAG GTGGAATCTC CGGGAGAAGG TGCACACAGT 3300
GATGGCAACT CCTCATCGTG TGACTTGCTG GACATTCTTC TGCAAGAACA GGAAGACTCC 3360
CACTCTGGCA CCGGATCTGC CACCTCTGGC TCCATGGGTT CAGGGTCGGG CTCTGGATCA 3420
GGTTCGGGAT CGGGATCAGG ATCAGGCTCA GGCTGCGGAA CATCAGCAAG TGGAGCTTCA 3480
GGAAGTAGCA ACACCAGCAA ATACTTTGGC AGCGTTGACT CCCTGGAACA CGACCACAAG 3540
GCAAAGGTAA AAGGCAAAAC CCGATGTGAA GCAGAAGGCA AACATTTCAT CAAATACGTT 3600
CTGCAGGAGC CCCTCTGGCT GCTCATGGCC AACGCCGACG ACAAGGTCAT GATGACGTAT 3660
CAAATGCCGT CGAGGGACAT TCAGAAAGTT CTGCGAGAGG ACAAAGAGAG GCTGAGGCAG 3720
ATGCAGAAGA GCCAGCCTCA CTTCTCCTCG GACCAGCGAC GGGAGCTGGT GGAGGAGCAC 3780
CCCTGGATGA GGAGGGGGGG GCTCCCCGCC GCCATCAACG TAAAGGACTG CGTGTACTGT 3840
GAGGATGCAG CGGCAGCTCC CATTGAAGAG GACCTGCCTG ATATGGACAT GGGCGAGCTG 3900
GGAGAGGAGA CAAGTCAAGA GAGCCAGAAC AAGCAGAGCC AATCAGAAAA GCCTCCGTCC 3960
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-GaG-021834Gallus gallus47.16 0.00e+00 1068.5
CGD-HoS-021036Homo sapiens (Human)46.17 0.00e+00 964.5
CGD-MuM-021066Mus musculus (Mouse)45.21 0.00e+00 943.3
CGD-RaN-022186Rattus norvegicus45.28 0.00e+00 949.5
Gene Ontology

GO:0005515--protein binding