CGDB Gene Information

Tag Content
CGDB ID CGD-EqC-040235
Ensembl Accession ENSECAP00000011691.1
Protein Name PER2
Ensembl Information ENSECAG00000013247; ENSECAT00000014614
Organism Equus caballus
NCBI Taxa ID 9796
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 12 ZT 0 LD >10 Predicted from orthologs Q65ZG8
CT 6 CT 18 DD1 4 SCN Predicted from orthologs O54943
CT 9 CT 3 DD1 3 eye Predicted from orthologs O54943
ZT 19 ZT 7 LD 2.5 amygdala Predicted from orthologs O54943
ZT 12 ZT 4 LD 2 bone Predicted from orthologs O54943
ZT 13 ZT 5 LD 2.4 bone marrow Predicted from orthologs O54943
ZT 18 ZT 6 LD 1.89 brain Predicted from orthologs O54943
ZT 15 ZT 23 LD 3 cortex Predicted from orthologs O54943
ZT 13 ZT 2 LD 10 heart Predicted from orthologs O54943
ZT 13 ZT 1 LD 2.5 hippocampus Predicted from orthologs O54943
ZT 16 ZT 0 LD 25 jejunum Predicted from orthologs O54943
ZT 15 ZT 23 LD 6 kidney Predicted from orthologs O54943
CT 15 CT 3 DD1 4 liver Predicted from orthologs O54943
ZT 16 ZT 4 LD 7 liver Predicted from orthologs O54943
CT 18 CT 6 DD2 10 MEFs Predicted from orthologs O54943
ZT 17 ZT 1 LD 6 megakaryocytes Predicted from orthologs O54943
ZT 18 ZT 6 LD 3 n primary visualcortex (V1) Predicted from orthologs O54943
CT 0 CT 12 DD2 10 NIH-3T3 cells Predicted from orthologs O54943
CT 12 CT 0 DD3 4.79 ovary Predicted from orthologs O54943
ZT 12 ZT 4 LD 5 pituitary gland Predicted from orthologs O54943
CT 12 CT 20 DD3 5 retina Predicted from orthologs O54943
ZT 12 ZT 16 LD 5 retina Predicted from orthologs O54943
CT 12 CT 20 DD3 6 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
ZT 0 ZT 16 LD 2 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
CT 9 CT 21 DD1 6 SCN Predicted from orthologs O54943
CT 8 CT 16 DD1 20 SCN Predicted from orthologs O54943
CT 15 CT 3 DD1 3 skeletal muscle Predicted from orthologs O54943
CT 14 CT 2 DD3 12 suprachiasmatic nucleus (SCN) Predicted from orthologs O54943
ZT 16 ZT 4 LD 9 abdominal adipose tissue Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 anterior cingulate Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 2.05 area postrema Predicted from orthologs Q9Z301
ZT 18 ZT 2 LD 6.38 AV3V Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 14 basolateral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 10 ZT 6 LD 2 caudal ventrolateral medulla Predicted from orthologs Q9Z301
CT 12 CT 8 DD17 4.35 colon Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 3.29 dorsal vagal motor nucleus Predicted from orthologs Q9Z301
ZT 2 ZT 14 LD 1.8 dorsomedial nucleus Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 5.5 entral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 5.7 heart Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 15 hippocampus Predicted from orthologs Q9Z301
ZT 16 ZT 3 LD 57 intestinal jejunal mucosa Predicted from orthologs Q9Z301
CT 16 CT 4 DD17 5 liver Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 8.5 liver Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q9Z301
ZT 0 ZT 12 LD 7 nucleus accumbens shell Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.07 nucleus ambiguus Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.63 paraventricular nucleus Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 4 prefrontal cortex Predicted from orthologs Q9Z301
ZT 12 ZT 8 LD 2.5 PVN Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 rostral agranular insula Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 3.92 SCN Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
Descriptionperiod circadian clock 2 [Source:HGNC Symbol;Acc:HGNC:8846](View all)
Protein Sequence
(Fasta)		 DAFSLMMAKS EHNPSTSGCS SEQSAKADTH KELIKTLREL KVHLPADRKA KGKASTLATL 60
KYALRSVKQV KANEEYYQLL MSSENHSSSA DVPSYTIEEI ESATSEFIVK NADMFAAAVS 120
LVTGKILYIS DQVASIFHCK RDTFYDAKFV EFLAPHDVSV FHSSTTPYKL PPWSICGGAD 180
SFTQECMEEK SFFCRVSVGK NHENEIRYHP FRMTPYLVKV RGPHAPESQL CCVLLAERVH 240
SGYEAPRIPP EKRIFTTTHT PNCLFQDVDD RAVPLLGYLP QDLIETPVLV QLHPSDRPLM 300
LAIHKKIVQS GGQPFDYSPI RFRARNGEYI TLDTSWSSFV NPWSRKISFI IGRHRVRVGP 360
LNEDVFSAQP CAEEKALHPS IQELTEQIHR LLLQPVPHSG SSGYGSLGSN GSHEHLMSQT 420
SSSDSNGHED SCPRRAEICK NGNKVKNKSH YPDESGEQKK NSATEMHSRS PAQRTAVPAA 480
EKDSSGASPA KASLPEELAC RNPPAGSYQQ ISCLDGVMRY LESCSEASTL KRKCEFPANA 540
SDKRKATVGP GLRCTETASH PKVNSHADVS AHLTSLTLPG KAESVVSLTS QCSYSSTIVH 600
VGDKKPQPEL ETVEDPASGP ESVDCPVGPA LPCSLGQEKE PFRKLGLTKE VLAAHTQKEE 660
QSFLLKFKEI QKLDLFQSRC HYYLEERSKG QSNERIVPGL RNTSGIDSSW KKTGKSRKLK 720
SKRVKPRDSS ESTGSGGPVP HRAPLGGLNA TAWSPSDASQ SSCPAMPFPA PVPAYSLPVF 780
PTPGIVPAPG SMAAAPLAPH TSFAVPTVPM DTQHEFAVQP PPFATPLGPV MALVVPSYPF 840
SPVTSNLPQA FFTSQPNFPS EVLPASQPEF PGRTSSPRQP CASTTPATPP SVAAPTGRAS 900
PPLFQSRGSS PLQLNLLQLE ETPEGSTAAT ATAGTTVTAG TTGAGPDCKP GASCNQQPKA 960
LSTRHEPADP QSSDALSTSS DLLDLLLHED LCSATGSALS GSGASATSDS LGSGLLACEA 1020
SRSGTGISDT SHTSKYFGSI DSSENNHKAK AKVDVDGSEH FIKYVLQDPV WLLMADTDDS 1080
VMMTYQMPSR NLETVLKEDR EKLKVMQRFQ PRFTEGQKQE LRAVHPWVQA GGLPAAVDVA 1140
GCVYCENKGK GNIFVPYEED IPPLQLSEAT DTKEEENGAP LSHRSKEQS 1189
Nucleotide Sequence
(Fasta)		 GATGCCTTTA GCCTGATGAT GGCGAAGTCT GAACACAACC CGTCCACAAG CGGCTGCAGT 60
AGCGAGCAGT CCGCCAAGGC AGACACGCAC AAAGAACTGA TAAAAACGCT GAGGGAGCTG 120
AAAGTCCACC TGCCCGCAGA CAGGAAGGCC AAGGGGAAGG CCAGCACGCT GGCGACCTTG 180
AAGTACGCCC TGAGGAGTGT GAAGCAAGTG AAAGCCAACG AGGAGTATTA CCAGCTGCTG 240
ATGTCCAGTG AGAACCACTC CAGCAGCGCA GACGTGCCCT CCTACACCAT AGAGGAAATC 300
GAGAGCGCCA CCTCCGAGTT CATCGTGAAG AACGCGGATA TGTTTGCTGC AGCTGTGTCC 360
CTGGTCACTG GGAAAATCCT GTACATCTCT GACCAAGTTG CCTCCATCTT TCACTGTAAG 420
AGAGACACCT TTTACGATGC CAAGTTCGTG GAGTTCTTGG CTCCCCATGA TGTTAGCGTG 480
TTCCACAGCT CCACCACGCC TTACAAGCTT CCCCCGTGGA GCATCTGCGG GGGCGCAGAC 540
TCTTTTACTC AAGAATGCAT GGAGGAGAAG TCGTTCTTCT GCCGCGTCAG TGTCGGGAAG 600
AACCACGAGA ACGAGATTCG CTACCACCCA TTCCGCATGA CGCCTTACCT GGTCAAGGTG 660
CGGGGCCCAC ACGCCCCCGA GAGCCAGCTG TGCTGCGTGC TGCTGGCCGA GAGAGTGCAC 720
TCGGGCTACG AAGCCCCCAG AATTCCTCCT GAAAAGAGAA TTTTTACGAC CACACACACC 780
CCAAATTGCT TGTTCCAGGA CGTGGACGAC AGGGCGGTCC CCCTCCTGGG CTACCTACCT 840
CAGGACCTGA TTGAGACCCC CGTGCTCGTG CAGCTTCACC CCAGTGACAG GCCCTTGATG 900
CTCGCCATCC ACAAGAAGAT CGTGCAGTCT GGTGGGCAGC CTTTTGACTA TTCGCCCATC 960
CGGTTCCGCG CCCGGAATGG GGAGTACATC ACACTGGACA CCAGCTGGTC CAGCTTCGTC 1020
AACCCGTGGA GCAGGAAGAT CTCCTTCATC ATCGGGAGAC ACAGAGTCAG GGTGGGCCCT 1080
TTGAATGAAG ACGTGTTCTC AGCTCAGCCA TGTGCGGAGG AGAAGGCCCT GCACCCCAGC 1140
ATTCAGGAGC TCACAGAGCA GATCCACCGG CTGCTGCTGC AGCCCGTCCC CCACAGCGGC 1200
TCCAGCGGCT ACGGGAGCCT GGGCAGCAAC GGCTCCCACG AGCACCTCAT GAGCCAGACC 1260
TCCTCCAGCG ACAGCAACGG CCACGAGGAC TCCTGCCCAA GGAGAGCCGA AATTTGTAAA 1320
AATGGTAACA AGGTCAAAAA CAAAAGTCAT TATCCTGATG AATCTGGAGA ACAAAAGAAA 1380
AATTCTGCTA CAGAAATGCA CAGTCGTTCC CCTGCTCAGA GGACAGCCGT CCCGGCTGCA 1440
GAAAAGGACA GCTCCGGGGC CAGCCCCGCC AAGGCCAGCC TCCCTGAGGA GCTGGCCTGC 1500
AGGAACCCGC CGGCCGGCTC CTACCAGCAG ATCAGCTGCT TGGACGGTGT CATGAGGTAC 1560
CTGGAGAGCT GCAGCGAGGC CTCCACCCTG AAGAGGAAGT GCGAGTTCCC CGCCAACGCC 1620
AGCGATAAGC GGAAGGCCAC CGTCGGCCCC GGGCTGCGTT GCACAGAGAC GGCATCGCAC 1680
CCCAAGGTCA ACAGCCACGC GGACGTCAGC GCACACTTGA CCTCGCTGAC GCTGCCCGGC 1740
AAGGCGGAGA GCGTGGTGTC CCTCACCAGC CAGTGCAGCT ACAGCAGCAC CATTGTCCAC 1800
GTGGGCGACA AGAAACCACA GCCTGAGCTG GAGACCGTGG AAGACCCTGC AAGTGGGCCC 1860
GAGTCTGTGG ACTGCCCGGT CGGCCCCGCC CTGCCCTGCA GCCTTGGCCA GGAGAAGGAG 1920
CCCTTCCGGA AGCTGGGCCT CACCAAGGAA GTGCTGGCCG CCCACACCCA GAAGGAGGAG 1980
CAGAGCTTCC TGCTGAAGTT CAAAGAAATC CAGAAACTCG ACCTTTTCCA GTCTCGCTGC 2040
CATTATTACT TAGAAGAAAG ATCCAAGGGG CAGTCGAATG AAAGAATCGT TCCTGGACTA 2100
AGAAATACCT CTGGAATCGA TTCATCGTGG AAAAAAACTG GGAAGAGCAG AAAATTGAAG 2160
TCCAAACGGG TCAAGCCTCG AGATTCCTCC GAGAGCACTG GGTCTGGGGG GCCTGTGCCC 2220
CACCGGGCCC CACTGGGGGG CCTGAACGCC ACGGCCTGGT CGCCGTCAGA TGCATCCCAG 2280
TCCAGCTGCC CCGCCATGCC CTTCCCCGCC CCTGTGCCGG CTTACTCCCT GCCCGTGTTT 2340
CCAACCCCAG GAATCGTGCC TGCACCAGGG AGCATGGCAG CAGCGCCCCT GGCTCCCCAC 2400
ACCAGCTTCG CGGTGCCCAC GGTGCCCATG GACACCCAGC ACGAGTTTGC CGTCCAGCCC 2460
CCGCCATTCG CCACCCCCTT GGGCCCGGTC ATGGCGCTGG TGGTGCCCAG CTATCCTTTC 2520
TCCCCAGTGA CCTCGAACCT GCCCCAGGCC TTCTTCACCA GCCAGCCCAA CTTCCCATCC 2580
GAGGTGCTCC CTGCCTCGCA GCCCGAGTTC CCTGGTCGGA CCTCATCCCC CAGACAGCCA 2640
TGCGCCTCCA CCACTCCGGC CACCCCACCG TCGGTCGCCG CGCCCACAGG CAGGGCCTCC 2700
CCACCACTCT TCCAGTCCCG TGGCAGCTCA CCCCTGCAGC TCAACCTGCT GCAGCTGGAG 2760
GAGACGCCCG AGGGCAGCAC CGCCGCCACA GCAACCGCGG GGACCACGGT GACTGCGGGG 2820
ACCACAGGGG CGGGGCCGGA CTGCAAACCT GGTGCGTCCT GCAACCAGCA GCCAAAGGCC 2880
CTCTCAACCC GCCACGAGCC CGCAGACCCC CAGAGCAGCG ACGCCCTCTC CACGTCCAGC 2940
GACCTGCTCG ACCTGTTACT GCACGAGGAC CTCTGCTCGG CCACAGGCTC GGCCCTGTCG 3000
GGAAGCGGGG CCTCTGCCAC CTCTGATTCC CTGGGTTCCG GCTTGCTGGC CTGTGAAGCG 3060
TCCAGAAGCG GGACAGGTAT TAGTGACACG AGTCACACCA GCAAATATTT CGGAAGCATC 3120
GACTCTTCGG AGAACAATCA CAAAGCGAAA GCGAAGGTGG ACGTGGACGG AAGTGAGCAC 3180
TTCATCAAAT ACGTCCTGCA GGACCCTGTC TGGCTGCTGA TGGCCGACAC GGACGACAGT 3240
GTCATGATGA CGTACCAGAT GCCTTCCCGA AATCTGGAAA CGGTTTTGAA GGAGGACCGA 3300
GAGAAGCTGA AAGTGATGCA GAGATTCCAG CCCAGGTTCA CGGAGGGCCA GAAGCAGGAA 3360
CTGCGGGCAG TCCACCCGTG GGTCCAGGCG GGCGGCCTGC CTGCGGCCGT CGACGTAGCA 3420
GGATGTGTTT ACTGTGAAAA CAAGGGAAAA GGCAACATTT TTGTACCGTA TGAGGAAGAT 3480
ATCCCTCCTC TGCAACTCAG CGAAGCAACA GACACCAAAG AAGAGGAAAA TGGAGCCCCC 3540
CTCAGTCACA GAAGCAAGGA GCAGTCGTAA CCCCCCTGCC CCCAGCCCGC ACAGCCGCGG 3600
TCTGCGTTAG ATGGTGCTCA GAAGAGAAGA AGGAGCTTCA TTGGTTTCTG AGGAAATGGA 3660
CAGATAGGCT AATGTTGCTT TTCTTTGTTT T 3691
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-CaE-021686Caenorhabditis elegans25.32 1.40e-20 99.37
CGD-MuM-021066Mus musculus (Mouse)68.7 0.00e+00 1594.3
CGD-RaN-022186Rattus norvegicus67.7 0.00e+00 1589.7
Gene Ontology

GO:0005515--protein binding
GO:0006355--regulation of transcription, DNA-templated