CGDB Gene Information

Tag Content
CGDB ID CGD-CaP-043134
Ensembl Accession ENSCPOP00000010189.2
Protein Name PER2
Ensembl Information ENSCPOG00000011333; ENSCPOT00000011439
Organism Cavia porcellus
NCBI Taxa ID 10141
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 12 ZT 0 LD >10 Predicted from orthologs Q65ZG8
ZT 6 ZT 18 LD 5 skeletal muscle Predicted from orthologs F6ZZH0
ZT 21 ZT 9 LD 6 duodenum Predicted from orthologs Q8QGQ8
ZT 2 ZT 18 LD 3.17 embryos Predicted from orthologs Q8QGQ8
ZT 6 ZT 18 LD 8 embryos Predicted from orthologs Q8QGQ8
CT 12 CT 0 DD1 3 granulosa cells Predicted from orthologs Q8QGQ8
ZT 3 ZT 18 LD 84.29 pineal glands Predicted from orthologs Q8QGQ8
ZT 23 ZT 11 LD 2.25 spleen Predicted from orthologs Q8QGQ8
CT 4 CT 12 DD2 27 aortic smooth muscle cells Predicted from orthologs O15055
ZT 4 ZT 21 LD 5 human HaCaT keratinocytes Predicted from orthologs O15055
ZT 1 ZT 19 LD 2.67 human hair follicle cells Predicted from orthologs O15055
CT 12 CT 0 LL1 3.43 oral mucosa Predicted from orthologs O15055
CT 3 CT 15 DD2 5 U2OS cells Predicted from orthologs O15055
CT 6 CT 18 DD1 4 SCN Predicted from orthologs O54943
CT 9 CT 3 DD1 3 eye Predicted from orthologs O54943
ZT 19 ZT 7 LD 2.5 amygdala Predicted from orthologs O54943
ZT 12 ZT 4 LD 2 bone Predicted from orthologs O54943
ZT 13 ZT 5 LD 2.4 bone marrow Predicted from orthologs O54943
ZT 18 ZT 6 LD 1.89 brain Predicted from orthologs O54943
ZT 15 ZT 23 LD 3 cortex Predicted from orthologs O54943
ZT 13 ZT 2 LD 10 heart Predicted from orthologs O54943
ZT 13 ZT 1 LD 2.5 hippocampus Predicted from orthologs O54943
ZT 16 ZT 0 LD 25 jejunum Predicted from orthologs O54943
ZT 15 ZT 23 LD 6 kidney Predicted from orthologs O54943
CT 15 CT 3 DD1 4 liver Predicted from orthologs O54943
ZT 16 ZT 4 LD 7 liver Predicted from orthologs O54943
CT 18 CT 6 DD2 10 MEFs Predicted from orthologs O54943
ZT 17 ZT 1 LD 6 megakaryocytes Predicted from orthologs O54943
ZT 18 ZT 6 LD 3 n primary visualcortex (V1) Predicted from orthologs O54943
CT 0 CT 12 DD2 10 NIH-3T3 cells Predicted from orthologs O54943
CT 12 CT 0 DD3 4.79 ovary Predicted from orthologs O54943
ZT 12 ZT 4 LD 5 pituitary gland Predicted from orthologs O54943
CT 12 CT 20 DD3 5 retina Predicted from orthologs O54943
ZT 12 ZT 16 LD 5 retina Predicted from orthologs O54943
CT 12 CT 20 DD3 6 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
ZT 0 ZT 16 LD 2 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
CT 9 CT 21 DD1 6 SCN Predicted from orthologs O54943
CT 8 CT 16 DD1 20 SCN Predicted from orthologs O54943
CT 15 CT 3 DD1 3 skeletal muscle Predicted from orthologs O54943
CT 14 CT 2 DD3 12 suprachiasmatic nucleus (SCN) Predicted from orthologs O54943
ZT 16 ZT 4 LD 9 abdominal adipose tissue Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 anterior cingulate Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 2.05 area postrema Predicted from orthologs Q9Z301
ZT 18 ZT 2 LD 6.38 AV3V Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 14 basolateral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 10 ZT 6 LD 2 caudal ventrolateral medulla Predicted from orthologs Q9Z301
CT 12 CT 8 DD17 4.35 colon Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 3.29 dorsal vagal motor nucleus Predicted from orthologs Q9Z301
ZT 2 ZT 14 LD 1.8 dorsomedial nucleus Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 5.5 entral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 5.7 heart Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 15 hippocampus Predicted from orthologs Q9Z301
ZT 16 ZT 3 LD 57 intestinal jejunal mucosa Predicted from orthologs Q9Z301
CT 16 CT 4 DD17 5 liver Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 8.5 liver Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q9Z301
ZT 0 ZT 12 LD 7 nucleus accumbens shell Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.07 nucleus ambiguus Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.63 paraventricular nucleus Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 4 prefrontal cortex Predicted from orthologs Q9Z301
ZT 12 ZT 8 LD 2.5 PVN Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 rostral agranular insula Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 3.92 SCN Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
Descriptionperiod circadian clock 2 [Source:HGNC Symbol;Acc:HGNC:8846](View all)
Protein Sequence
(Fasta)		 MDGFVEFPPS PTKEPMEPQA GQASMQEDMD MSSGCSGNEA PENSSTGQDS QGSDFDHRKE 60
LGMIVEPPNP QRFPKTPSAF SLMLVEPEPN LSTSGCSSKG SPKADTHKEL IRTLRELKVH 120
LPADKKAKGK ASTLATLKYA LRSVKQVKAN EEYYQLLMSS ESQPFSVDVP SYTVEQVEGV 180
TSEYMGKNSD MFVVAVSLVS GKILYISSQV ASIFHCKQDT FSDAKFVEFL APHDVSVFHS 240
CTTPCRLPSW SMCSGVDSFT QECMEEKSFF CRVSVGKNHE NEICYQPFRM TPYLVKVQEP 300
LGAESQLCCL LLAERVHSGY EAPRIPPEKR IFTTTHTPNC LFQDVDERAV PLLGYLPQDL 360
IEKPVLLQLH PSDRPLMLAI HKKILQSGGQ PFDYSPLRFR ARNGEYITLD SSWSSFINPW 420
SRKISFIIGR HKVRVGPLNE DVFAVLPCVE EKALHPNIQE LTEQIHRLLL QPVPHSGSSG 480
YGSLGSNGSH EQLMSQTSSS DSTGHEEARH RRAEICKNSN KTKTKGQFPH ESGKQKKKSV 540
TELQSSALAQ VKAVPVAEDS SGASLPKIGF PEELACKDQP TCSYQQISCL DGVMRYLESC 600
TEATTLKRKC EFPANIPSRK ATVSPGLHTG EATSKVSSHA EVSARLSSLA LPGKAESVVS 660
LTSQCSYSST IVHVGDKKLQ PELETVEDAT SGPESLDCLP GGHSQEKGPL QRLGLTKEVL 720
ASHTQKEEQS FLQKFREVRR LGILQAHCQH YLQERTRGQS SERVAPGLRN AAGIDSSWKK 780
TGKNRKLKSK WAKPRDSSES TGSGGPPPPR PPLVGLNATA WSPSDTSQSS CSAVPFPTPV 840
PSYSLPVFPA PGIVPAPGAT PPAVPHASFP VPTVAMGTQH EFAVQPLPFP APMAPVVAFM 900
LPSYPFPATT SLPQAFFPGH PTLPSEMTPA SQPECPSQTS LPQQPCSCPA TPATPPAATL 960
ATSRASPPLF QSRGSSPLQL NLLQLEEAPE GSTGATGTVT AGPDCTPAHD RQPKAPPTHD 1020
EPSDAQNSDA LSTSSDLLNL LLSEDLCSAT GSALSGSGAS ATSDSLGSSS LGCDASRNGA 1080
GSSDTSHTSK YFGSIDSSEN NHKAKVNADA EESKHLIKYV LQDPIWLLMA DTNDSVMMTY 1140
QLPSRDLESV LKEDREKLQL LQRSQPRFTE GQRRELREVH PWVQTGGLPA AIDVAECVYC 1200
ENEEKGNLCV LYDEDVPSMG LSDALDTKEE EKGHPVGHKE EQL 1243
Nucleotide Sequence
(Fasta)		 ATGGATGGAT TCGTGGAATT TCCTCCCAGC CCCACCAAGG AGCCCATGGA GCCCCAGGCC 60
GGCCAGGCCT CGATGCAGGA GGACATGGAC ATGAGCAGCG GCTGCAGTGG AAACGAGGCC 120
CCTGAGAACA GCTCCACGGG GCAGGACTCT CAGGGCAGCG ACTTCGACCA CAGGAAGGAG 180
CTGGGGATGA TAGTGGAGCC GCCCAACCCC CAGAGATTCC CAAAAACTCC CAGCGCCTTT 240
AGCCTGATGC TGGTGGAGCC TGAGCCCAAC TTATCTACCA GTGGCTGCAG CAGCAAAGGG 300
TCTCCCAAAG CAGACACACA CAAGGAACTG ATCCGAACAC TGCGGGAACT GAAGGTCCAC 360
CTCCCAGCTG ACAAGAAGGC CAAGGGCAAG GCCAGCACGC TGGCCACCCT GAAGTACGCC 420
CTGCGGAGCG TAAAGCAGGT GAAAGCTAAT GAGGAGTATT ACCAGCTGCT GATGTCCAGC 480
GAGAGCCAGC CCTTCAGTGT GGATGTGCCC TCCTATACCG TGGAGCAGGT GGAGGGCGTC 540
ACCTCCGAGT ATATGGGGAA GAACTCAGAT ATGTTTGTCG TGGCCGTGTC CCTGGTTTCG 600
GGGAAGATCC TGTACATCTC TAGCCAGGTG GCGTCCATAT TTCACTGCAA GCAGGACACC 660
TTCAGCGATG CCAAGTTTGT GGAGTTCCTG GCGCCCCATG ATGTCAGCGT GTTCCACAGC 720
TGCACCACCC CCTGCAGGCT TCCGTCCTGG AGTATGTGCA GTGGAGTCGA TTCCTTCACT 780
CAGGAATGCA TGGAGGAGAA GTCTTTCTTT TGCCGTGTCA GCGTCGGGAA GAACCATGAG 840
AATGAGATCT GCTACCAGCC ATTCCGCATG ACGCCCTACC TGGTCAAGGT GCAGGAGCCA 900
CTGGGGGCTG AGAGTCAGCT GTGCTGTCTG CTGCTGGCGG AGAGAGTGCA CTCCGGCTAT 960
GAGGCCCCTA GGATTCCTCC TGAGAAGAGG ATTTTTACAA CTACACACAC GCCGAATTGC 1020
TTGTTCCAGG ATGTGGATGA GAGGGCAGTT CCCCTCCTGG GCTACTTACC TCAAGACCTG 1080
ATTGAGAAGC CTGTACTCCT GCAGCTGCAT CCCAGCGACA GGCCACTGAT GCTGGCCATC 1140
CATAAGAAGA TCCTGCAGTC CGGTGGACAG CCCTTTGACT ATTCTCCTCT CCGGTTCCGC 1200
GCCCGGAACG GGGAGTACAT CACACTGGAC AGCAGCTGGT CCAGCTTCAT CAACCCCTGG 1260
AGCCGGAAGA TCTCCTTCAT CATCGGGAGG CACAAAGTCA GGGTGGGCCC TTTGAATGAG 1320
GATGTGTTCG CGGTGCTCCC TTGTGTGGAG GAGAAGGCCC TGCACCCCAA CATCCAGGAG 1380
CTGACGGAGC AGATACACAG GCTGCTGCTG CAGCCTGTGC CCCACAGCGG CTCCAGTGGC 1440
TACGGGAGCC TGGGCAGCAA TGGATCCCAC GAGCAGCTCA TGAGTCAGAC CTCATCCAGC 1500
GACAGCACTG GCCATGAGGA GGCCCGGCAC CGGAGAGCCG AGATTTGTAA GAACAGTAAC 1560
AAGACCAAAA CCAAAGGTCA ATTTCCCCAT GAGTCTGGAA AACAAAAGAA AAAGTCTGTT 1620
ACAGAACTGC AAAGTAGTGC CTTGGCTCAG GTGAAAGCAG TGCCTGTCGC AGAGGACAGC 1680
TCTGGGGCCA GCTTGCCCAA GATAGGCTTC CCTGAGGAGC TGGCTTGCAA GGACCAGCCC 1740
ACCTGTTCCT ACCAGCAGAT CAGCTGCCTG GATGGCGTCA TGAGGTATTT GGAGAGCTGC 1800
ACTGAGGCCA CCACCCTGAA GAGGAAGTGC GAGTTCCCTG CAAATATCCC TTCCCGCAAG 1860
GCCACGGTCA GCCCCGGGCT GCACACTGGA GAGGCCACCT CCAAGGTGAG CAGCCATGCA 1920
GAGGTGAGCG CCCGCCTGAG CTCACTGGCA CTGCCTGGCA AGGCCGAGAG TGTGGTGTCC 1980
CTCACCAGCC AGTGCAGCTA CAGCAGCACA ATCGTCCACG TCGGGGACAA AAAGCTGCAG 2040
CCAGAGCTGG AGACAGTGGA AGATGCCACC AGTGGGCCTG AGTCCCTGGA TTGCCTGCCA 2100
GGTGGCCACA GCCAGGAGAA GGGGCCCCTT CAGAGGCTGG GTCTTACCAA GGAGGTGCTG 2160
GCCTCACACA CACAGAAGGA GGAGCAGAGC TTCCTGCAGA AGTTCCGTGA GGTACGGCGG 2220
CTGGGCATCC TGCAGGCCCA CTGCCAGCAC TACCTGCAAG AGAGGACCCG GGGGCAGTCA 2280
AGCGAGCGCG TGGCTCCTGG ACTAAGAAAT GCTGCTGGAA TAGATTCTTC TTGGAAAAAA 2340
ACTGGCAAGA ACAGAAAACT GAAGTCCAAA TGGGCCAAGC CTCGTGACTC CTCCGAAAGC 2400
ACGGGATCTG GAGGGCCCCC ACCGCCCCGA CCCCCACTAG TGGGCCTGAA TGCCACTGCC 2460
TGGTCACCAT CAGACACATC TCAGTCCAGC TGCTCTGCGG TGCCCTTCCC TACCCCTGTG 2520
CCCTCTTACT CCCTGCCCGT GTTCCCAGCA CCAGGAATAG TGCCTGCACC AGGGGCAACC 2580
CCGCCAGCAG TGCCCCATGC CAGCTTCCCA GTGCCCACAG TGGCCATGGG CACCCAGCAC 2640
GAGTTTGCAG TGCAGCCCCT GCCTTTTCCC GCCCCCATGG CCCCTGTCGT GGCCTTCATG 2700
CTCCCCAGCT ACCCCTTCCC AGCCACCACA AGCCTGCCCC AGGCCTTCTT TCCAGGCCAC 2760
CCCACGCTCC CCTCTGAGAT GACTCCTGCC TCGCAGCCCG AGTGCCCCAG TCAGACCTCA 2820
CTCCCCCAGC AGCCGTGCTC CTGCCCAGCT ACCCCTGCCA CCCCACCAGC AGCCACTTTG 2880
GCCACAAGCA GAGCTTCCCC ACCGCTCTTC CAGTCCCGTG GCAGCTCGCC CCTGCAGCTC 2940
AACCTGCTGC AGCTAGAAGA GGCACCTGAG GGCAGCACAG GGGCCACAGG GACAGTGACA 3000
GCTGGCCCAG ACTGCACACC TGCTCATGAT CGGCAGCCTA AAGCACCTCC AACACACGAT 3060
GAACCCTCAG ATGCTCAGAA CAGTGATGCC CTTTCCACGT CCAGCGACCT GCTCAACCTC 3120
CTGCTGAGCG AGGACCTCTG CTCGGCCACA GGGTCAGCGC TGTCTGGGAG TGGGGCCTCC 3180
GCCACCTCGG ATTCCCTGGG CTCCAGTTCA CTGGGTTGTG ATGCATCCCG AAACGGGGCA 3240
GGCAGCAGTG ACACAAGTCA CACCAGCAAG TACTTTGGCA GCATCGACTC CTCAGAGAAC 3300
AACCACAAAG CAAAAGTGAA CGCGGACGCG GAGGAGAGCA AGCATCTCAT CAAGTATGTC 3360
CTGCAGGACC CCATCTGGCT GCTGATGGCG GACACCAATG ACAGTGTGAT GATGACGTAC 3420
CAGCTGCCCT CCCGGGACCT GGAGTCGGTG TTAAAGGAGG ACAGAGAGAA GCTGCAGCTG 3480
CTGCAGAGGT CTCAGCCCCG ATTCACGGAG GGCCAGAGGC GGGAGCTGCG AGAGGTGCAC 3540
CCGTGGGTGC AGACAGGTGG TCTGCCTGCA GCCATCGATG TGGCGGAATG TGTTTACTGT 3600
GAAAACGAGG AGAAAGGCAA CTTGTGTGTG CTGTATGACG AGGATGTTCC CTCCATGGGG 3660
CTCAGCGATG CCTTAGACAC CAAAGAGGAA GAGAAGGGAC ATCCTGTGGG TCACAAGGAG 3720
GAGCAGCTGT AA 3732
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-CaE-021686Caenorhabditis elegans24.07 1.50e-17 89.35
CGD-EqC-020992Equus caballus65.52 0.00e+00 1522.3
CGD-GaG-021834Gallus gallus50.12 0.00e+00 1137.9
CGD-HoS-021036Homo sapiens (Human)67.48 0.00e+00 1636.7
CGD-MuM-021066Mus musculus (Mouse)68.46 0.00e+00 1631.3
CGD-RaN-022186Rattus norvegicus68.14 0.00e+00 1624.4
Gene Ontology

GO:0005654--nucleoplasm
GO:0005515--protein binding
GO:0005634--nucleus
GO:0005737--cytoplasm