CGDB Gene Information

Tag Content
CGDB ID CGD-OrL-045650
Ensembl Accession ENSORLP00000019352.1
Protein Name PER2 (1 of many)
Ensembl Information ENSORLG00000015456; ENSORLT00000019353
Organism Oryzias latipes
NCBI Taxa ID 8090
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 21 ZT 9 LD 6 duodenum Predicted from orthologs Q8QGQ8
ZT 2 ZT 18 LD 3.17 embryos Predicted from orthologs Q8QGQ8
ZT 6 ZT 18 LD 8 embryos Predicted from orthologs Q8QGQ8
CT 12 CT 0 DD1 3 granulosa cells Predicted from orthologs Q8QGQ8
ZT 3 ZT 18 LD 84.29 pineal glands Predicted from orthologs Q8QGQ8
ZT 23 ZT 11 LD 2.25 spleen Predicted from orthologs Q8QGQ8
CT 6 CT 18 DD1 4 SCN Predicted from orthologs O54943
CT 9 CT 3 DD1 3 eye Predicted from orthologs O54943
ZT 19 ZT 7 LD 2.5 amygdala Predicted from orthologs O54943
ZT 12 ZT 4 LD 2 bone Predicted from orthologs O54943
ZT 13 ZT 5 LD 2.4 bone marrow Predicted from orthologs O54943
ZT 18 ZT 6 LD 1.89 brain Predicted from orthologs O54943
ZT 15 ZT 23 LD 3 cortex Predicted from orthologs O54943
ZT 13 ZT 2 LD 10 heart Predicted from orthologs O54943
ZT 13 ZT 1 LD 2.5 hippocampus Predicted from orthologs O54943
ZT 16 ZT 0 LD 25 jejunum Predicted from orthologs O54943
ZT 15 ZT 23 LD 6 kidney Predicted from orthologs O54943
CT 15 CT 3 DD1 4 liver Predicted from orthologs O54943
ZT 16 ZT 4 LD 7 liver Predicted from orthologs O54943
CT 18 CT 6 DD2 10 MEFs Predicted from orthologs O54943
ZT 17 ZT 1 LD 6 megakaryocytes Predicted from orthologs O54943
ZT 18 ZT 6 LD 3 n primary visualcortex (V1) Predicted from orthologs O54943
CT 0 CT 12 DD2 10 NIH-3T3 cells Predicted from orthologs O54943
CT 12 CT 0 DD3 4.79 ovary Predicted from orthologs O54943
ZT 12 ZT 4 LD 5 pituitary gland Predicted from orthologs O54943
CT 12 CT 20 DD3 5 retina Predicted from orthologs O54943
ZT 12 ZT 16 LD 5 retina Predicted from orthologs O54943
CT 12 CT 20 DD3 6 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
ZT 0 ZT 16 LD 2 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
CT 9 CT 21 DD1 6 SCN Predicted from orthologs O54943
CT 8 CT 16 DD1 20 SCN Predicted from orthologs O54943
CT 15 CT 3 DD1 3 skeletal muscle Predicted from orthologs O54943
CT 14 CT 2 DD3 12 suprachiasmatic nucleus (SCN) Predicted from orthologs O54943
ZT 16 ZT 4 LD 9 abdominal adipose tissue Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 anterior cingulate Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 2.05 area postrema Predicted from orthologs Q9Z301
ZT 18 ZT 2 LD 6.38 AV3V Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 14 basolateral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 10 ZT 6 LD 2 caudal ventrolateral medulla Predicted from orthologs Q9Z301
CT 12 CT 8 DD17 4.35 colon Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 3.29 dorsal vagal motor nucleus Predicted from orthologs Q9Z301
ZT 2 ZT 14 LD 1.8 dorsomedial nucleus Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 5.5 entral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 5.7 heart Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 15 hippocampus Predicted from orthologs Q9Z301
ZT 16 ZT 3 LD 57 intestinal jejunal mucosa Predicted from orthologs Q9Z301
CT 16 CT 4 DD17 5 liver Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 8.5 liver Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q9Z301
ZT 0 ZT 12 LD 7 nucleus accumbens shell Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.07 nucleus ambiguus Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.63 paraventricular nucleus Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 4 prefrontal cortex Predicted from orthologs Q9Z301
ZT 12 ZT 8 LD 2.5 PVN Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 rostral agranular insula Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 3.92 SCN Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
Descriptionperiod circadian clock 2 [Source:HGNC Symbol;Acc:HGNC:8846](View all)
Protein Sequence
(Fasta)		 EDVEMGGSGS SGSGTESHGN ESHGNESHCN ESVVSSNGNG KDSALLESSG SNKSSNSHSP 60
SPPSSSNAFS LVSSEQDNPS TSGCSSEQSA KAKTQKELFK TLKELKMHLP SEKRNKGKSS 120
TVNTLKYALR CIKQVKANEE YYQMLMINDS QPPGFDVSSY TIEEINTITS EYTLKNTDIF 180
AVAVSLITGK IVYISDQAAS ILNCKREVFK NAKFVEFLTP QDVSVFYSFT TPYRLPSWSM 240
CTGAESSPTE CMQEKSFFCR ISGGKEREGD LQYYPFRMTP YLMKVQDAEL SEEQFCCLLL 300
AERVHSGYEA PRIPPDKRIF TTTHTPNCVF QDVDERRAVP LLGYLPQDLI GTPVLLNLHP 360
SDRPLMLAVH RKILQYAGQA FDHSSIRFCA RNGEYITIDT SWSSFVNPWS RKVSFVIGRH 420
KVRMGPVNED VFAAPAFHEG KMMDSDIQEI SEQIHRLLLQ PVHNMGSSGY GSLGSNGSHE 480
QQVSISSSSE SNGNLPAANA AEETCKTKPS RTFQEICKGV HMLKNQDAQV GLHSSSCSAW 540
PSRHDQRKAA DKNGLLLAVF CGMDVAMLEP DGATPLPLKA GSDQSVCSYQ QISCLDSVIR 600
YLESCNIPIT VKRKYQFSSN TTSSNSDDDK KGSEDGMQGA HPAPVVGGTL APLTLPSKAE 660
SVVSITSQCS YSSTIVHVGD KKPQPESDIT ACFCVAEIIE DVAESPAPPA APVSVVSPPS 720
QEKEAYKRLG LTKQVLAAHT QKEEQAFLNR CRELRSARSL QREGSSHLHR QRSPANAAGA 780
AKQSITKPET ATTTKKGNYR NRKSKKPRMK HPDSSDSAVS NRRPRPPLQG LNQTSWSPSE 840
ASQSAFSVSY PTMVPAYPLY PPTPAAPTQA PRPDPSLPAG FGPTPIVTPV VALVLPNYLF 900
PQIGQPFAPQ PSFAVQTQFV AQAPFPPQPF PYAMAPELPK APAVEPREGA ASRSSTPASG 960
AREPTTSPPL FESRCSSPLQ LNLLIMEEGQ RSVERQDNTA PPAGGQAGTA AGASYMGKNG 1020
GAAKADDPQQ VESPCDGAHS DDKSSSCDLL DLLLQKQEDS HSGTGSATSG SMGSGSGSGC 1080
QTSASEASAS QTGSSNTSKY FGSVDSLEHD PNGKAKMRGE GASGCTKSQV KAAAHEEGEH 1140
FIKCVLQEPL WLLMANADEK VMMTYQMPSR DIQRVLREDK EQLRQMQKSQ PHFTSDQRRE 1200
LVEEHPWMRR GGLPAAINVK ECVYCEDVAA APLEEDLPDM DMGELTEDLS REGRSSHSQS 1260
AETPPQPDSG S 1271
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-GaG-021834Gallus gallus46.93 0.00e+00 993.4
CGD-MuM-021066Mus musculus (Mouse)44.63 0.00e+00 900.6
CGD-RaN-022186Rattus norvegicus44.66 0.00e+00 894.4
Gene Ontology

GO:0007165--signal transduction
GO:0004871--signal transducer activity
GO:0005515--protein binding