CGDB Gene Information

Tag Content
CGDB ID CGD-OrA-038635
Ensembl Accession ENSOANP00000004842.2
Protein Name PER2
Ensembl Information ENSOANG00000003059; ENSOANT00000004843
Organism Ornithorhynchus anatinus
NCBI Taxa ID 9258
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 12 ZT 0 LD >10 Predicted from orthologs Q65ZG8
ZT 6 ZT 18 LD 5 skeletal muscle Predicted from orthologs F6ZZH0
ZT 21 ZT 9 LD 6 duodenum Predicted from orthologs Q8QGQ8
ZT 2 ZT 18 LD 3.17 embryos Predicted from orthologs Q8QGQ8
ZT 6 ZT 18 LD 8 embryos Predicted from orthologs Q8QGQ8
CT 12 CT 0 DD1 3 granulosa cells Predicted from orthologs Q8QGQ8
ZT 3 ZT 18 LD 84.29 pineal glands Predicted from orthologs Q8QGQ8
ZT 23 ZT 11 LD 2.25 spleen Predicted from orthologs Q8QGQ8
CT 4 CT 12 DD2 27 aortic smooth muscle cells Predicted from orthologs O15055
ZT 4 ZT 21 LD 5 human HaCaT keratinocytes Predicted from orthologs O15055
ZT 1 ZT 19 LD 2.67 human hair follicle cells Predicted from orthologs O15055
CT 12 CT 0 LL1 3.43 oral mucosa Predicted from orthologs O15055
CT 3 CT 15 DD2 5 U2OS cells Predicted from orthologs O15055
CT 6 CT 18 DD1 4 SCN Predicted from orthologs O54943
CT 9 CT 3 DD1 3 eye Predicted from orthologs O54943
ZT 19 ZT 7 LD 2.5 amygdala Predicted from orthologs O54943
ZT 12 ZT 4 LD 2 bone Predicted from orthologs O54943
ZT 13 ZT 5 LD 2.4 bone marrow Predicted from orthologs O54943
ZT 18 ZT 6 LD 1.89 brain Predicted from orthologs O54943
ZT 15 ZT 23 LD 3 cortex Predicted from orthologs O54943
ZT 13 ZT 2 LD 10 heart Predicted from orthologs O54943
ZT 13 ZT 1 LD 2.5 hippocampus Predicted from orthologs O54943
ZT 16 ZT 0 LD 25 jejunum Predicted from orthologs O54943
ZT 15 ZT 23 LD 6 kidney Predicted from orthologs O54943
CT 15 CT 3 DD1 4 liver Predicted from orthologs O54943
ZT 16 ZT 4 LD 7 liver Predicted from orthologs O54943
CT 18 CT 6 DD2 10 MEFs Predicted from orthologs O54943
ZT 17 ZT 1 LD 6 megakaryocytes Predicted from orthologs O54943
ZT 18 ZT 6 LD 3 n primary visualcortex (V1) Predicted from orthologs O54943
CT 0 CT 12 DD2 10 NIH-3T3 cells Predicted from orthologs O54943
CT 12 CT 0 DD3 4.79 ovary Predicted from orthologs O54943
ZT 12 ZT 4 LD 5 pituitary gland Predicted from orthologs O54943
CT 12 CT 20 DD3 5 retina Predicted from orthologs O54943
ZT 12 ZT 16 LD 5 retina Predicted from orthologs O54943
CT 12 CT 20 DD3 6 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
ZT 0 ZT 16 LD 2 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
CT 9 CT 21 DD1 6 SCN Predicted from orthologs O54943
CT 8 CT 16 DD1 20 SCN Predicted from orthologs O54943
CT 15 CT 3 DD1 3 skeletal muscle Predicted from orthologs O54943
CT 14 CT 2 DD3 12 suprachiasmatic nucleus (SCN) Predicted from orthologs O54943
ZT 0 ZT 12 LD 2 muscle Predicted from orthologs W5QC67
ZT 4 ZT 0 LD 5 SCN Predicted from orthologs W5QC67
ZT 16 ZT 4 LD 9 abdominal adipose tissue Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 anterior cingulate Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 2.05 area postrema Predicted from orthologs Q9Z301
ZT 18 ZT 2 LD 6.38 AV3V Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 14 basolateral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 10 ZT 6 LD 2 caudal ventrolateral medulla Predicted from orthologs Q9Z301
CT 12 CT 8 DD17 4.35 colon Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 3.29 dorsal vagal motor nucleus Predicted from orthologs Q9Z301
ZT 2 ZT 14 LD 1.8 dorsomedial nucleus Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 5.5 entral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 5.7 heart Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 15 hippocampus Predicted from orthologs Q9Z301
ZT 16 ZT 3 LD 57 intestinal jejunal mucosa Predicted from orthologs Q9Z301
CT 16 CT 4 DD17 5 liver Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 8.5 liver Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q9Z301
ZT 0 ZT 12 LD 7 nucleus accumbens shell Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.07 nucleus ambiguus Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.63 paraventricular nucleus Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 4 prefrontal cortex Predicted from orthologs Q9Z301
ZT 12 ZT 8 LD 2.5 PVN Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 rostral agranular insula Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 3.92 SCN Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
Descriptionperiod circadian clock 2 [Source:HGNC Symbol;Acc:HGNC:8846](View all)
Protein Sequence
(Fasta)		 MNGYAELSHD PSNLAIDDQM KPRQNQDALQ EDIEMSSGSS GNDFSGNEAN ENYFSGRDSH 60
GNESDENGKD SAMLVETLDS HKSSNAFTLM IANCDHNLST SGCSSEQSAK AKTQKELIKT 120
LKELKVHLPP DKKTKGKSST LATLKYALRS IKQVKANEDY YQLLMSNENH PSTLEVSSYT 180
VDEVENITSE YIMKNVDMFA VAVSLVTGKI LYISDQAATV LHCKRDTFHN AKFVEFLAPH 240
DVSVFYSSTT PSRLPSLSIC RGVESSSQEC MEEKSFFCRV SGGKEHENEI CYHPFRMTPY 300
LIKAQDKQAA EEQLCCVLLA EKVHSGYEAP RIPPDKRIFT TTHTPSCLFQ DVDERAVPLL 360
GYLPQDLVGT PVLLHLHPSD RPLMLAIHKK ILQYGGQPFD YSPIRFCTRN GNYITMDTSW 420
SSFINPWSRK VSFIIGRHKV RTGPLNEDVF AVHNCTEEKT LHPSIQEITE QIYRLLLQPV 480
YTSGSSGYGS LGSNGSHEHL MSVTSSSDSN GNVTEDPQKK KLSTLKGSCK DVQMTPNRGQ 540
VYIESGAKQE HKNKPPEKQS NAISWTKDGL VIGKDSLGNN LQKNLTAEDL AYKNQPVCSY 600
QQISCLDSVI RYLESCDVAG TMKKKGESFP SAAILNSGAE KQKSTVKAMR QSGEETVLLK 660
AHLNPTLLKP SKAKGRPGVG AHLTSLALPG KAGSVASFTS QCSYSSTIVH VGDKKPQPEL 720
EMIEDTSGTE PLDGLTAPPS NCNGNQDKEP FKKLGLTKEI LAVHTQKEEQ SFLHKFKEIK 780
RFNIFQSRCN YYLQERSKGR ASERVTRVLR NGASGIDSSW KKNGKNRKQK SKRMKPHESS 840
DSSISCTNLP HRSPLIGLNT TAWSPSENSQ ASYPAIPFPS VMPAYSLPVF SAAGNVQGPE 900
IMPPAPSTSQ TGFNEPLCSQ NNFPMQPPQF ATPVAPVLAL VMPNYTYPQM NPNLPESFYS 960
SQPDFSGQLG FSSQMMFSAQ PQFPVPTPFP SEAVFPPQPL QFNPAESEKP PGIESRDGLS 1020
RSTTPQSPVQ QGHVSLPLFH SRCSSPLQLN LLQLEETPRT TEKGAAALSG MLAGHRVLSE 1080
GPMNKIVKFV DCKRKETPSV DTPMDTHNSD ALSMPSDFLD LLLNEDVCSG TGSASTGSAV 1140
SAASESLGSG SNVCDLSRSG TGSSETSHTS KYFGSVDSSE NNHKVKMITD KEEREHFIKY 1200
VLQDPIWLLM ANADETVMMT YQIPSRNLEA VLKEDREKLK RMQKFQPKFT EEQKRELNEV 1260
HSWIQKGGLP KAVNVSECIY CEDTTKDKIF APYDEEIHSM EPNEVIETDG EKNVNTLNRV 1320
NEEQT 1325
Nucleotide Sequence
(Fasta)		 ATGAATGGAT ATGCAGAACT CTCTCATGAC CCTAGTAACC TGGCCATTGA TGACCAAATG 60
AAACCCAGGC AAAATCAGGA TGCTCTTCAA GAAGATATTG AAATGAGTAG TGGATCGAGT 120
GGCAATGATT TTAGTGGAAA TGAAGCAAAT GAAAACTATT TCAGTGGGCG TGATTCTCAT 180
GGAAACGAAT CTGATGAAAA TGGAAAAGAT TCAGCAATGC TGGTTGAAAC TTTGGACAGT 240
CACAAAAGTT CAAATGCTTT TACACTGATG ATTGCCAACT GTGATCATAA TCTGTCTACA 300
AGTGGATGCA GCAGTGAGCA GTCGGCCAAG GCTAAAACTC AAAAGGAATT GATAAAAACA 360
TTGAAGGAAC TGAAAGTTCA CCTCCCTCCT GACAAGAAGA CTAAAGGCAA ATCCAGCACT 420
TTAGCAACAT TGAAATACGC ACTTAGAAGC ATTAAACAAG TGAAAGCAAA TGAAGACTAT 480
TATCAGTTGT TAATGTCAAA TGAAAACCAT CCCTCCACCC TCGAAGTGTC GTCTTACACA 540
GTGGATGAAG TTGAAAATAT TACTTCCGAA TACATAATGA AAAATGTGGA TATGTTTGCA 600
GTGGCAGTGT CCTTGGTGAC TGGAAAAATT TTGTACATCT CTGATCAGGC TGCAACAGTA 660
CTTCACTGTA AGAGAGATAC CTTTCACAAT GCCAAATTTG TGGAATTCTT GGCACCTCAT 720
GATGTTAGCG TGTTCTATAG CTCAACTACA CCTTCTAGAT TGCCATCATT GAGTATTTGC 780
AGAGGAGTGG AATCTTCTTC CCAAGAATGC ATGGAGGAGA AATCTTTCTT CTGTCGTGTC 840
AGTGGTGGTA AAGAGCATGA AAATGAGATC TGCTACCATC CATTCCGCAT GACTCCGTAC 900
CTTATCAAAG CACAAGATAA GCAGGCTGCA GAGGAACAGC TTTGTTGTGT TTTGCTTGCT 960
GAAAAGGTGC ACTCTGGTTA TGAAGCACCC AGAATTCCTC CAGATAAGAG AATTTTTACA 1020
ACTACACATA CACCAAGTTG TTTATTCCAA GATGTAGATG AAAGAGCTGT ACCTCTTTTG 1080
GGATACCTTC CTCAGGATTT GGTAGGAACA CCTGTGCTGC TTCATCTCCA CCCAAGTGAC 1140
AGACCTTTAA TGCTCGCTAT TCACAAAAAA ATATTACAGT ATGGTGGACA GCCTTTCGAC 1200
TATTCTCCAA TCCGATTCTG CACTCGAAAT GGGAACTATA TAACAATGGA TACCAGCTGG 1260
TCCAGCTTCA TCAATCCTTG GAGCAGAAAA GTTTCCTTTA TAATCGGAAG ACATAAAGTT 1320
AGGACGGGCC CTTTAAATGA AGATGTGTTT GCTGTTCATA ACTGCACAGA AGAAAAAACC 1380
CTTCATCCGA GCATTCAGGA AATCACAGAA CAGATATACA GATTGTTACT GCAGCCAGTG 1440
TACACCAGTG GATCTAGTGG CTATGGAAGC TTGGGCAGTA ATGGATCACA TGAGCACTTG 1500
ATGAGTGTGA CATCCTCCAG CGACAGCAAT GGCAATGTCA CTGAAGACCC GCAGAAGAAA 1560
AAACTTAGCA CTCTTAAAGG GAGTTGTAAA GATGTCCAAA TGACCCCGAA CAGAGGCCAA 1620
GTTTATATTG AATCTGGAGC AAAACAAGAA CATAAGAACA AACCTCCAGA AAAACAAAGT 1680
AATGCTATTT CCTGGACAAA AGATGGCCTA GTCATTGGAA AGGACAGTTT AGGTAACAAC 1740
TTGCAGAAGA ATCTAACTGC AGAAGATCTG GCTTATAAGA ACCAGCCTGT GTGTTCCTAT 1800
CAACAAATAA GCTGTTTAGA TAGTGTCATT AGGTATTTGG AGAGTTGTGA TGTAGCTGGA 1860
ACCATGAAGA AGAAGGGTGA ATCCTTCCCA AGTGCTGCTA TTTTAAATTC TGGTGCTGAG 1920
AAACAAAAAT CAACAGTTAA AGCAATGCGG CAATCTGGAG AGGAAACGGT GTTGTTGAAA 1980
GCTCACTTAA ATCCCACTCT GTTGAAGCCA TCCAAAGCTA AAGGACGTCC AGGAGTTGGG 2040
GCTCACTTAA CCTCTTTGGC TTTACCCGGC AAAGCTGGAA GCGTCGCATC CTTCACCAGT 2100
CAGTGCAGCT ACAGTAGTAC CATAGTTCAT GTTGGGGACA AAAAGCCGCA GCCGGAATTA 2160
GAAATGATAG AAGATACTAG TGGGACAGAA CCTTTAGACG GTCTCACTGC TCCTCCATCT 2220
AACTGTAACG GTAACCAAGA CAAGGAACCA TTTAAGAAAT TGGGGCTTAC AAAGGAAATT 2280
CTTGCAGTCC ATACGCAAAA AGAGGAGCAA AGTTTTTTGC ACAAATTCAA AGAAATCAAG 2340
AGATTCAACA TCTTTCAATC ACGCTGCAAT TATTACCTGC AAGAAAGGTC CAAAGGTCGT 2400
GCAAGTGAAC GTGTCACTCG TGTACTAAGA AATGGTGCTT CTGGAATAGA TTCATCATGG 2460
AAGAAAAATG GGAAGAACCG CAAACAGAAA TCAAAACGAA TGAAACCGCA TGAGTCCTCA 2520
GACAGCAGTA TTTCATGTAC AAATCTCCCT CATAGGTCTC CCCTAATAGG CCTAAACACA 2580
ACAGCTTGGT CGCCATCAGA AAATTCTCAA GCCAGCTATC CCGCAATTCC TTTTCCATCA 2640
GTTATGCCTG CATATTCTTT GCCAGTTTTT TCAGCAGCAG GAAACGTACA AGGACCTGAA 2700
ATTATGCCAC CAGCCCCGTC AACTTCCCAG ACTGGTTTTA ATGAACCTCT GTGTTCTCAA 2760
AATAATTTTC CTATGCAGCC ACCACAATTT GCTACTCCTG TCGCCCCAGT CCTGGCACTC 2820
GTCATGCCCA ATTACACATA TCCTCAAATG AACCCTAATT TACCGGAGTC ATTTTACTCC 2880
AGCCAGCCTG ATTTCTCTGG ACAACTTGGG TTCTCTTCAC AGATGATGTT CTCAGCACAG 2940
CCTCAGTTCC CTGTTCCGAC TCCTTTCCCA TCAGAGGCTG TGTTCCCCCC GCAGCCACTT 3000
CAGTTCAATC CAGCAGAAAG TGAAAAGCCT CCTGGGATAG AATCACGAGA TGGCCTGTCC 3060
CGCTCCACCA CTCCACAGTC TCCTGTTCAA CAAGGCCACG TCTCACTTCC TTTATTTCAT 3120
TCAAGGTGCA GTTCACCTTT ACAGTTAAAC CTTCTTCAGT TGGAAGAAAC ACCCAGGACT 3180
ACTGAAAAAG GAGCTGCTGC TCTTTCGGGA ATGTTGGCAG GACATAGGGT TTTAAGTGAA 3240
GGTCCGATGA ACAAAATTGT AAAGTTTGTG GACTGCAAAA GAAAAGAAAC TCCGAGCGTG 3300
GACACACCAA TGGATACGCA TAACAGTGAT GCACTCTCCA TGCCAAGTGA CTTTCTTGAT 3360
CTTTTACTGA ATGAAGATGT TTGTTCAGGC ACTGGATCTG CTTCAACTGG GAGTGCAGTT 3420
TCTGCCGCTT CTGAATCTCT GGGATCTGGA TCTAATGTCT GTGACCTATC TAGAAGTGGA 3480
ACCGGCAGTA GTGAGACAAG TCATACCAGC AAATACTTTG GAAGTGTTGA CTCCTCAGAG 3540
AACAATCATA AAGTAAAAAT GATTACAGAC AAAGAGGAAC GTGAGCATTT CATTAAATAT 3600
GTTCTTCAGG ATCCTATTTG GTTATTAATG GCAAATGCAG ATGAAACGGT TATGATGACT 3660
TATCAGATCC CATCCAGAAA CTTGGAAGCT GTTTTGAAAG AAGACAGAGA AAAATTGAAG 3720
CGAATGCAGA AATTCCAGCC CAAGTTTACA GAAGAACAAA AGAGAGAGCT TAACGAAGTT 3780
CATTCATGGA TTCAGAAGGG TGGGCTGCCC AAAGCAGTTA ATGTATCTGA GTGCATTTAC 3840
TGTGAAGATA CCACAAAAGA TAAGATTTTT GCACCGTATG ATGAAGAAAT CCATTCGATG 3900
GAGCCGAATG AAGTGATTGA AACTGATGGA GAGAAAAATG TAAACACCTT AAACCGTGTA 3960
AATGAAGAAC AGACGTAG 3978
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-CaE-021686Caenorhabditis elegans22.01 3.80e-14 78.18
CGD-EqC-020992Equus caballus55.97 0.00e+00 1315.8
CGD-GaG-021834Gallus gallus63.44 0.00e+00 1572.4
CGD-HoS-021036Homo sapiens (Human)57.12 0.00e+00 1406.3
CGD-MuM-021066Mus musculus (Mouse)53.48 0.00e+00 1301.2
CGD-OvA-022197Ovis aries41.33 0.00e+00 846.3
CGD-RaN-022186Rattus norvegicus52.55 0.00e+00 1286.2
Gene Ontology

GO:0005515--protein binding
GO:0007165--signal transduction
GO:0004871--signal transducer activity
GO:0005654--nucleoplasm
GO:0005634--nucleus
GO:0005737--cytoplasm