CGDB Gene Information

Tag Content
CGDB ID CGD-PrC-038136
Ensembl Accession ENSPCAP00000016003.1
Protein Name PER2
Ensembl Information ENSPCAG00000017101; ENSPCAT00000017101
Organism Procavia capensis
NCBI Taxa ID 9813
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 21 ZT 9 LD 6 duodenum Predicted from orthologs Q8QGQ8
ZT 2 ZT 18 LD 3.17 embryos Predicted from orthologs Q8QGQ8
ZT 6 ZT 18 LD 8 embryos Predicted from orthologs Q8QGQ8
CT 12 CT 0 DD1 3 granulosa cells Predicted from orthologs Q8QGQ8
ZT 3 ZT 18 LD 84.29 pineal glands Predicted from orthologs Q8QGQ8
ZT 23 ZT 11 LD 2.25 spleen Predicted from orthologs Q8QGQ8
CT 4 CT 12 DD2 27 aortic smooth muscle cells Predicted from orthologs O15055
ZT 4 ZT 21 LD 5 human HaCaT keratinocytes Predicted from orthologs O15055
ZT 1 ZT 19 LD 2.67 human hair follicle cells Predicted from orthologs O15055
CT 12 CT 0 LL1 3.43 oral mucosa Predicted from orthologs O15055
CT 3 CT 15 DD2 5 U2OS cells Predicted from orthologs O15055
CT 6 CT 18 DD1 4 SCN Predicted from orthologs O54943
CT 9 CT 3 DD1 3 eye Predicted from orthologs O54943
ZT 19 ZT 7 LD 2.5 amygdala Predicted from orthologs O54943
ZT 12 ZT 4 LD 2 bone Predicted from orthologs O54943
ZT 13 ZT 5 LD 2.4 bone marrow Predicted from orthologs O54943
ZT 18 ZT 6 LD 1.89 brain Predicted from orthologs O54943
ZT 15 ZT 23 LD 3 cortex Predicted from orthologs O54943
ZT 13 ZT 2 LD 10 heart Predicted from orthologs O54943
ZT 13 ZT 1 LD 2.5 hippocampus Predicted from orthologs O54943
ZT 16 ZT 0 LD 25 jejunum Predicted from orthologs O54943
ZT 15 ZT 23 LD 6 kidney Predicted from orthologs O54943
CT 15 CT 3 DD1 4 liver Predicted from orthologs O54943
ZT 16 ZT 4 LD 7 liver Predicted from orthologs O54943
CT 18 CT 6 DD2 10 MEFs Predicted from orthologs O54943
ZT 17 ZT 1 LD 6 megakaryocytes Predicted from orthologs O54943
ZT 18 ZT 6 LD 3 n primary visualcortex (V1) Predicted from orthologs O54943
CT 0 CT 12 DD2 10 NIH-3T3 cells Predicted from orthologs O54943
CT 12 CT 0 DD3 4.79 ovary Predicted from orthologs O54943
ZT 12 ZT 4 LD 5 pituitary gland Predicted from orthologs O54943
CT 12 CT 20 DD3 5 retina Predicted from orthologs O54943
ZT 12 ZT 16 LD 5 retina Predicted from orthologs O54943
CT 12 CT 20 DD3 6 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
ZT 0 ZT 16 LD 2 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
CT 9 CT 21 DD1 6 SCN Predicted from orthologs O54943
CT 8 CT 16 DD1 20 SCN Predicted from orthologs O54943
CT 15 CT 3 DD1 3 skeletal muscle Predicted from orthologs O54943
CT 14 CT 2 DD3 12 suprachiasmatic nucleus (SCN) Predicted from orthologs O54943
ZT 16 ZT 4 LD 9 abdominal adipose tissue Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 anterior cingulate Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 2.05 area postrema Predicted from orthologs Q9Z301
ZT 18 ZT 2 LD 6.38 AV3V Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 14 basolateral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 10 ZT 6 LD 2 caudal ventrolateral medulla Predicted from orthologs Q9Z301
CT 12 CT 8 DD17 4.35 colon Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 3.29 dorsal vagal motor nucleus Predicted from orthologs Q9Z301
ZT 2 ZT 14 LD 1.8 dorsomedial nucleus Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 5.5 entral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 5.7 heart Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 15 hippocampus Predicted from orthologs Q9Z301
ZT 16 ZT 3 LD 57 intestinal jejunal mucosa Predicted from orthologs Q9Z301
CT 16 CT 4 DD17 5 liver Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 8.5 liver Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q9Z301
ZT 0 ZT 12 LD 7 nucleus accumbens shell Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.07 nucleus ambiguus Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.63 paraventricular nucleus Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 4 prefrontal cortex Predicted from orthologs Q9Z301
ZT 12 ZT 8 LD 2.5 PVN Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 rostral agranular insula Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 3.92 SCN Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
Descriptionperiod circadian clock 2 [Source:HGNC Symbol;Acc:HGNC:8846](View all)
Protein Sequence
(Fasta)		 MNGYADFPPS PRDPSKSLLA PEHSRALLQE DTEMSSGCSG NESSENCAPG QGSDRDHGKG 60
LEMLVGPPDA HPGSSAFSLM MAKSEHNPST SGCSSEQSGK ADVRRELVKT LRGLKAHLPM 120
DRKAKGRAST LATLEYALRS VKQVKANEEY YQLLMSSDSH LSSVDVPSYT VAELESVTSE 180
HVAKNVDMFA VGVSLVTGKV LYISNQVASI FHCKRDTFTN AKFVELLSPQ DVSVFHSCTS 240
PHRLPSWGAC CGADSFAQEH VEEKSFFCRV SVGKTRENKA HYRPFRMTPY LVKVREPRGP 300
ESQLCCVLLA EKVHSGYEAP RIPPEKRIFT TTHTPNCLFQ DVDERAVPLL GYLPQDLLES 360
PVLLQLHPSD RPLMLAIHRK VLRSGGQPFN YSPLRFRVRN GEYITLDTSW SSFVNPWSRK 420
IAFVIGRHKV RVGPLNEDVF ADQPAVEDKT LHPSTQELTE QIHRLLLQPV PHSGSSGYSS 480
LGSNGSHEPL RSHTSSSDSN GHEDTCQKKP ESCKNGTKTK NKSRSSQGPG EQEKKPVTEL 540
QNYPPVPMKA ATATAKDGPG IGFPKXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 600
XXXXXXXTGP WPSETDSQAD VSTHLASRAA LPGKAESVVS LSSQCSYSST IVHVGDKKPQ 660
PELEMREDAA SGAESLSGPD GPGLSCSLGP EKEPFKRLGL TKEVLAAHTQ KEEQSFLHKF 720
RETHRLRTLR PCCHRSGQER PRGQPSKPTA HGLRQASGVA LSWKKSRKNR KLKSKRAKSR 780
PSSRSTVSGG PLPARAPLTG LDATAWSPSN TSHSCPAVPF PSPTCPLPVF PTPGPVAAAP 840
MAPHTGFAVP VGAQPDLVAQ SLPFTAPLAP VMAFVLPNYP LPAAMAPSLP QSFFPSQTSF 900
PGHPEMIPVS EPVFPSQTPS PTQLYTCPAT PVTPSSTTGP TGRVSPQLFQ SRGSSPLQLN 960
LLQLEEAPEG GPAPAGPDAK PVWSRDHPPK ARPTLEEPLE AQHSDTLSTS SGLLDLLLSE 1020
ALCSASGSAT SESLGSRSLG CTASRSGTGS GDTRHTSQYF GSVDSSEKNH RAKPSAGVGE 1080
SERLMKYVLQ DPIWLLMANT DSSVMMTYQM PARDPKDVLK EDREKLRALR KLQPQFTAAQ 1140
KQELCEVHPW VQVGGLPVAV DVECVYCEDK GNVTFYAPSE EDLPALGLSG ATDTTEQKGC 1200
PLSQEDQGQT
Nucleotide Sequence
(Fasta)		 ATGAATGGAT ATGCTGACTT TCCTCCCAGC CCCAGGGACC CCTCCAAGAG CCTGCTGGCA 60
CCTGAACACA GCCGAGCCCT GCTGCAGGAA GACACCGAGA TGAGCAGTGG CTGCAGCGGA 120
AATGAGTCCA GTGAGAACTG CGCCCCGGGG CAGGGCAGTG ACCGTGACCA CGGCAAGGGG 180
CTGGAGATGC TGGTGGGGCC GCCAGATGCC CACCCGGGCT CAAGTGCCTT CAGCCTGATG 240
ATGGCCAAGT CTGAACACAA CCCGTCGACA AGCGGCTGCA GCAGTGAGCA GTCGGGCAAA 300
GCGGACGTGC GCAGGGAGCT GGTGAAGACC CTGAGGGGGC TGAAGGCCCA CCTCCCGATG 360
GACAGGAAGG CCAAAGGGCG GGCCAGCACA CTGGCCACCC TTGAGTATGC CCTGCGGAGC 420
GTGAAGCAGG TGAAAGCTAA TGAAGAATAT TACCAGCTGT TAATGTCCAG TGACAGCCAC 480
CTGTCCAGCG TGGACGTGCC CTCCTACACC GTTGCGGAGC TCGAGAGTGT GACCTCCGAG 540
CATGTCGCCA AGAACGTGGA CATGTTTGCC GTTGGCGTGT CCTTGGTGAC GGGGAAAGTC 600
CTGTATATCT CCAACCAAGT GGCATCCATC TTTCACTGCA AGAGGGACAC CTTCACCAAC 660
GCCAAATTCG TGGAGCTCTT GTCGCCCCAG GACGTCAGCG TGTTCCACAG CTGCACCAGC 720
CCACACCGGC TGCCGTCCTG GGGCGCCTGC TGTGGAGCAG ATTCTTTTGC TCAGGAGCAC 780
GTGGAGGAGA AGTCTTTCTT TTGTCGTGTC AGTGTCGGGA AGACCCGTGA GAACAAGGCC 840
CACTACCGTC CCTTCCGCAT GACGCCTTAC CTTGTCAAGG TGCGGGAGCC CCGGGGACCC 900
GAGAGCCAGC TGTGCTGCGT CCTGCTGGCC GAGAAGGTGC ACTCCGGCTA CGAAGCCCCC 960
AGAATTCCTC CTGAGAAGAG AATCTTCACC ACCACGCATA CACCCAATTG CTTGTTCCAG 1020
GATGTGGACG AGAGGGCGGT CCCCCTCCTG GGCTACCTGC CTCAGGACCT GTTGGAGAGC 1080
CCGGTTCTGC TGCAGCTGCA CCCGAGTGAC AGGCCTCTGA TGCTGGCCAT CCACAGGAAG 1140
GTTCTGCGGT CGGGTGGGCA GCCTTTCAAC TATTCGCCCC TCCGCTTCCG CGTCCGGAAC 1200
GGCGAATACA TCACCCTGGA CACCAGCTGG TCCAGCTTCG TCAACCCCTG GAGCCGGAAG 1260
ATCGCCTTCG TCATCGGCAG GCACAAAGTC AGGGTGGGCC CCTTGAATGA AGACGTGTTT 1320
GCGGACCAGC CAGCTGTGGA GGACAAGACC CTGCACCCCA GCACCCAGGA GCTCACGGAG 1380
CAGATCCACC GGCTGCTGCT GCAGCCAGTG CCCCACAGCG GCTCTAGTGG CTACAGCAGC 1440
CTGGGCAGCA ACGGGTCCCA CGAGCCCCTC AGGAGCCACA CGTCCTCCAG CGACAGCAAT 1500
GGCCACGAGG ACACCTGCCA GAAGAAGCCT GAAAGTTGTA AAAACGGTAC CAAGACCAAA 1560
AACAAAAGTC GTTCTTCTCA GGGCCCCGGA GAACAAGAGA AAAAACCTGT CACCGAACTG 1620
CAGAACTATC CCCCTGTTCC GATGAAGGCG GCCACAGCCA CAGCCAAGGA TGGCCCGGGC 1680
ATTGGCTTCC CCAAGNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1740
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1800
NNNNNNNNNN NNNNNNNNNA GACAGGGCCG TGGCCCTCCG AGACAGACAG CCAAGCAGAC 1860
GTCAGCACAC ACCTGGCCTC ACGGGCAGCC CTGCCCGGCA AAGCGGAGAG CGTGGTGTCC 1920
CTCAGCAGCC AGTGCAGCTA TAGCAGCACC ATCGTCCACG TCGGGGACAA GAAGCCGCAG 1980
CCTGAGCTAG AAATGAGGGA GGATGCCGCC AGCGGGGCCG AGTCCCTGAG TGGCCCGGAC 2040
GGCCCAGGGC TGAGCTGCAG CCTGGGCCCC GAGAAAGAGC CTTTCAAGAG GCTGGGCCTC 2100
ACCAAGGAGG TGCTGGCCGC CCACACACAG AAGGAGGAGC AGAGCTTCCT GCACAAGTTC 2160
AGGGAGACGC ACCGACTCCG CACGCTCCGG CCCTGCTGCC ATCGTTCTGG CCAGGAAAGG 2220
CCCAGGGGGC AGCCGAGCAA GCCGACTGCT CATGGACTAA GGCAAGCTTC TGGGGTGGCT 2280
TTATCGTGGA AGAAGTCCAG GAAGAACAGA AAGCTCAAGT CCAAGCGGGC CAAGTCACGC 2340
CCCTCATCCA GGAGCACGGT GTCGGGAGGG CCGCTGCCTG CCCGCGCCCC GCTCACAGGC 2400
CTCGATGCCA CGGCCTGGTC GCCATCCAAC ACGTCCCACT CCTGTCCTGC TGTGCCCTTC 2460
CCCTCCCCCA CCTGCCCCCT GCCTGTGTTT CCCACACCAG GGCCAGTGGC AGCAGCACCC 2520
ATGGCCCCCC ACACTGGCTT TGCAGTGCCC GTGGGTGCCC AGCCTGACTT GGTAGCCCAG 2580
TCCTTGCCGT TTACAGCCCC TCTGGCTCCG GTCATGGCGT TCGTGCTGCC CAACTACCCC 2640
CTCCCCGCTG CCATGGCCCC CAGCCTACCC CAGTCCTTCT TCCCCAGCCA GACCAGCTTT 2700
CCTGGCCACC CCGAGATGAT CCCTGTCTCA GAACCAGTGT TCCCCAGTCA GACCCCATCC 2760
CCCACACAGC TGTACACCTG TCCAGCCACC CCTGTCACCC CGTCGTCAAC CACAGGGCCC 2820
ACGGGCCGAG TCTCACCCCA ACTCTTCCAG TCCCGAGGCA GCTCACCCCT GCAGCTCAAC 2880
CTGCTGCAGC TGGAGGAGGC CCCCGAGGGT GGCCCTGCGC CTGCGGGGCC TGACGCCAAG 2940
CCAGTCTGGT CCAGGGACCA CCCACCAAAG GCACGGCCCA CTCTCGAGGA ACCCTTGGAG 3000
GCTCAGCACA GTGACACCCT CTCCACGTCC AGTGGCCTGC TCGACCTCCT GCTGAGTGAG 3060
GCCCTCTGCT CGGCCTCAGG CTCTGCCACC TCGGAGTCTC TGGGCTCCAG GTCGCTGGGC 3120
TGCACGGCAT CCAGGAGTGG GACAGGCAGC GGTGACACAA GACACACCAG CCAGTATTTT 3180
GGAAGCGTTG ACTCTTCGGA GAAGAATCAC AGAGCAAAGC CAAGTGCGGG TGTGGGCGAG 3240
AGTGAGCGTC TCATGAAATA CGTGCTCCAG GACCCCATCT GGCTGCTGAT GGCCAACACG 3300
GACAGCAGTG TCATGATGAC ATACCAGATG CCTGCCCGAG ATCCCAAGGA CGTCCTGAAG 3360
GAGGACAGAG AGAAGCTGAG AGCGCTGCGC AAGCTCCAGC CGCAGTTCAC GGCAGCCCAG 3420
AAGCAGGAAC TCTGTGAGGT CCACCCCTGG GTGCAGGTGG GCGGCCTGCC TGTGGCTGTG 3480
GATGTGGAAT GTGTTTACTG TGAAGACAAG GGAAACGTTA CCTTTTATGC ACCATCTGAG 3540
GAAGACCTTC CCGCTCTGGG ACTCAGCGGA GCCACAGACA CCACAGAACA GAAGGGGTGC 3600
CCTCTGAGTC AGGAGGACCA AGGGCAGACG TAG 3633
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-GaG-021834Gallus gallus58.53 8.00e-180 627.9
CGD-HoS-021036Homo sapiens (Human)57.54 0.00e+00 1349
CGD-MuM-021066Mus musculus (Mouse)53.3 0.00e+00 1226.1
CGD-RaN-022186Rattus norvegicus52.8 0.00e+00 1216.1
Gene Ontology

GO:0005515--protein binding
GO:0005654--nucleoplasm
GO:0005634--nucleus
GO:0005737--cytoplasm