CGDB Gene Information

Tag Content
CGDB ID CGD-PeS-059572
Ensembl Accession ENSPSIP00000002179.1
Protein Name PER2
Ensembl Information ENSPSIG00000002172; ENSPSIT00000002186
Organism Pelodiscus sinensis
NCBI Taxa ID 13735
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 6 ZT 18 LD 5 skeletal muscle Predicted from orthologs F6ZZH0
ZT 21 ZT 9 LD 6 duodenum Predicted from orthologs Q8QGQ8
ZT 2 ZT 18 LD 3.17 embryos Predicted from orthologs Q8QGQ8
ZT 6 ZT 18 LD 8 embryos Predicted from orthologs Q8QGQ8
CT 12 CT 0 DD1 3 granulosa cells Predicted from orthologs Q8QGQ8
ZT 3 ZT 18 LD 84.29 pineal glands Predicted from orthologs Q8QGQ8
ZT 23 ZT 11 LD 2.25 spleen Predicted from orthologs Q8QGQ8
CT 4 CT 12 DD2 27 aortic smooth muscle cells Predicted from orthologs O15055
ZT 4 ZT 21 LD 5 human HaCaT keratinocytes Predicted from orthologs O15055
ZT 1 ZT 19 LD 2.67 human hair follicle cells Predicted from orthologs O15055
CT 12 CT 0 LL1 3.43 oral mucosa Predicted from orthologs O15055
CT 3 CT 15 DD2 5 U2OS cells Predicted from orthologs O15055
CT 6 CT 18 DD1 4 SCN Predicted from orthologs O54943
CT 9 CT 3 DD1 3 eye Predicted from orthologs O54943
ZT 19 ZT 7 LD 2.5 amygdala Predicted from orthologs O54943
ZT 12 ZT 4 LD 2 bone Predicted from orthologs O54943
ZT 13 ZT 5 LD 2.4 bone marrow Predicted from orthologs O54943
ZT 18 ZT 6 LD 1.89 brain Predicted from orthologs O54943
ZT 15 ZT 23 LD 3 cortex Predicted from orthologs O54943
ZT 13 ZT 2 LD 10 heart Predicted from orthologs O54943
ZT 13 ZT 1 LD 2.5 hippocampus Predicted from orthologs O54943
ZT 16 ZT 0 LD 25 jejunum Predicted from orthologs O54943
ZT 15 ZT 23 LD 6 kidney Predicted from orthologs O54943
CT 15 CT 3 DD1 4 liver Predicted from orthologs O54943
ZT 16 ZT 4 LD 7 liver Predicted from orthologs O54943
CT 18 CT 6 DD2 10 MEFs Predicted from orthologs O54943
ZT 17 ZT 1 LD 6 megakaryocytes Predicted from orthologs O54943
ZT 18 ZT 6 LD 3 n primary visualcortex (V1) Predicted from orthologs O54943
CT 0 CT 12 DD2 10 NIH-3T3 cells Predicted from orthologs O54943
CT 12 CT 0 DD3 4.79 ovary Predicted from orthologs O54943
ZT 12 ZT 4 LD 5 pituitary gland Predicted from orthologs O54943
CT 12 CT 20 DD3 5 retina Predicted from orthologs O54943
ZT 12 ZT 16 LD 5 retina Predicted from orthologs O54943
CT 12 CT 20 DD3 6 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
ZT 0 ZT 16 LD 2 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
CT 9 CT 21 DD1 6 SCN Predicted from orthologs O54943
CT 8 CT 16 DD1 20 SCN Predicted from orthologs O54943
CT 15 CT 3 DD1 3 skeletal muscle Predicted from orthologs O54943
CT 14 CT 2 DD3 12 suprachiasmatic nucleus (SCN) Predicted from orthologs O54943
ZT 0 ZT 12 LD 2 muscle Predicted from orthologs W5QC67
ZT 4 ZT 0 LD 5 SCN Predicted from orthologs W5QC67
ZT 16 ZT 4 LD 9 abdominal adipose tissue Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 anterior cingulate Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 2.05 area postrema Predicted from orthologs Q9Z301
ZT 18 ZT 2 LD 6.38 AV3V Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 14 basolateral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 10 ZT 6 LD 2 caudal ventrolateral medulla Predicted from orthologs Q9Z301
CT 12 CT 8 DD17 4.35 colon Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 3.29 dorsal vagal motor nucleus Predicted from orthologs Q9Z301
ZT 2 ZT 14 LD 1.8 dorsomedial nucleus Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 5.5 entral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 5.7 heart Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 15 hippocampus Predicted from orthologs Q9Z301
ZT 16 ZT 3 LD 57 intestinal jejunal mucosa Predicted from orthologs Q9Z301
CT 16 CT 4 DD17 5 liver Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 8.5 liver Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q9Z301
ZT 0 ZT 12 LD 7 nucleus accumbens shell Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.07 nucleus ambiguus Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.63 paraventricular nucleus Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 4 prefrontal cortex Predicted from orthologs Q9Z301
ZT 12 ZT 8 LD 2.5 PVN Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 rostral agranular insula Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 3.92 SCN Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
Descriptionperiod circadian clock 2 [Source:HGNC Symbol;Acc:HGNC:8846](View all)
Protein Sequence
(Fasta)		 QLEIGENISQ QPYSLKQQYK MSGYSALAND HTHIIAEETD IQVKPEQHPD TLQKAIEMNS 60
GSSGNVISGN DMNENYSNSH DSHGNESSEN GKEMAVLMES LDCHKSSSVF SLLIVDSEHN 120
PSTSGCSSEQ STKAKTQKEL RKTLQELKAR LPPEKRIKGK SCVLATLKYA LKSIKQVKAN 180
EEYYQLLMIN ESHPSGLDVS SYTVEEVENI TSEYIMKNAD MFAVAVSLIT GKILYISDQA 240
ASILRCKRDF FKKAKFVEFL APQDVSVFYS STTPYKLPSW SICNGVETST QDCMEEKSFF 300
CRISISAGKE HEYFICYHPF RMTPYLIRIQ DTENAEDQLC CVLLAEKVHS GYEAPRIPPD 360
KRIFTTTHTP NCLFQDIDER AVPLLGYLPQ DLIGTPILLH LHPSDRPLML AIHKKILQYG 420
GQPFDYSPIR FCTRNGEYIT MDTSWSSFIN PWSRKVSFII GRHKVRTGPL NEDVFAAPNY 480
TEDKILHPSI QEITEQIYRL LLQPVHNSGS SGYGSLGSNG SHEHLMSVAS SSDSNGNNNE 540
EAQKEKHVTC HDAHMVRNEI QHIYTNRRVK LEHKKKAFGE KKNCPSVWIE DTTEKDTSAI 600
AAHKDVVPEK LAWKEQPVYS YQQISCLDGV IRYLESCSLP GTLKRKCEPS SNAASLDSND 660
HKQKTADNSI KSSADPAVLK TSDKSNGPPV VGAHLTSLAL PGKPESVVSF TSQCSYSSTI 720
VHVGDKKPQP ELEIIEDGPS GTELLDSHLL VPLSRTTHAN QEKEPFKKLG LTKEILAVHT 780
QKEEQSFLNK FKEIKRFNIF QSRCNYYLRD RPRGRPGKHG TRGQRNGIFG VDHSWRKSGK 840
NRKSKSKRIK PKESSDSTTS ETNPSHRFPL QGLNSTAWSS PSDTSQASHS AMSFPAVMPA 900
YPLPVFSTVP PDPEACLSGF SDLPDSGNNC PLQLSQFSAP LLTPVVAVVL PNYMYTQLNN 960
DLPQTLYNCQ PNFSADPAFS SQTMLSAQPT LAAPNPFPQP TFFPAQPFHY KIPAESEKAP 1020
AMESQNDASH SSMPQFLGPQ DQASPPLFQS RCSSPLQLNL LQLEETPKSA GSGNVAGGHR 1080
ATIEVGATGK SITDDSSRKG SSPIDSPMEA QNSDALSMSS DILDILLQED ACSGTGSASS 1140
GSGVSAAAES LGSGSNGCVM SESRTGSSET SHTSKYFGSI DSSENNHHMK KNAEVGNSEH 1200
FIKYVLQDPI WLLMANTDDA VMMTYQIPSR NVEVVLKEDK QKLKQIQKLQ PKFTEEQKKE 1260
LIEVHPWIQK GGLPKAIANS ECIYCEENTR NSFYIPYEEE VHEMELNEMI EASEENNLAI 1320
LKIGEEQT 1328
Nucleotide Sequence
(Fasta)		 CAACTTGAAA TCGGTGAAAA TATTTCTCAG CAGCCATACT CTCTAAAGCA GCAATACAAA 60
ATGAGTGGGT ATTCTGCACT TGCAAACGAC CATACCCACA TTATTGCTGA GGAGACTGAT 120
ATTCAGGTAA AACCTGAACA ACATCCAGAT ACTCTTCAGA AGGCCATTGA AATGAACAGT 180
GGATCCAGTG GTAATGTCAT CAGTGGAAAT GATATGAATG AAAACTACTC TAATAGTCAT 240
GATTCTCATG GCAATGAATC TAGTGAAAAT GGGAAAGAGA TGGCAGTGCT GATGGAGTCT 300
TTAGATTGTC ATAAAAGCTC AAGTGTATTT AGCCTGTTGA TTGTAGACTC TGAACATAAT 360
CCATCTACCA GTGGATGCAG CAGTGAGCAA TCTACTAAAG CCAAAACACA AAAGGAATTG 420
AGGAAAACAT TGCAGGAACT GAAAGCACGC CTTCCTCCTG AGAAAAGAAT CAAAGGAAAA 480
TCTTGTGTGC TGGCAACATT GAAATACGCA CTTAAAAGTA TTAAACAAGT TAAAGCCAAT 540
GAAGAATATT ACCAGCTACT GATGATTAAT GAAAGCCATC CTTCTGGTCT CGATGTGTCA 600
TCCTATACAG TAGAGGAAGT TGAGAACATT ACTTCTGAAT ACATCATGAA AAATGCAGAC 660
ATGTTTGCTG TAGCAGTTTC CCTGATTACT GGGAAAATCT TGTACATCTC TGATCAAGCT 720
GCCTCTATTC TCCGCTGTAA GAGGGATTTC TTTAAAAAAG CCAAATTTGT GGAGTTTTTG 780
GCACCTCAGG ATGTCAGTGT TTTCTACAGT TCCACTACCC CTTACAAATT GCCATCTTGG 840
AGTATTTGTA ATGGAGTTGA AACTTCAACA CAAGACTGCA TGGAGGAGAA ATCATTTTTC 900
TGTCGCATTA GTATTAGTGC AGGAAAGGAA CATGAGTATT TCATCTGCTA CCACCCATTT 960
CGCATGACTC CTTACCTCAT CAGAATACAA GACACTGAGA ATGCTGAAGA TCAGCTTTGC 1020
TGTGTGTTGC TTGCAGAAAA GGTTCATTCT GGCTATGAAG CACCTAGAAT TCCTCCTGAC 1080
AAGAGAATTT TTACAACTAC GCATACACCA AATTGTTTGT TCCAGGATAT AGACGAAAGA 1140
GCTGTACCTC TTTTGGGATA CCTGCCTCAG GACTTAATAG GAACCCCTAT TTTATTGCAT 1200
CTTCACCCAA GTGACAGACC TCTAATGCTA GCAATTCACA AAAAAATACT TCAATATGGT 1260
GGACAGCCTT TTGACTATTC ACCAATCAGG TTCTGCACTA GAAATGGAGA ATACATAACA 1320
ATGGATACCA GCTGGTCTAG TTTCATTAAT CCTTGGAGCC GAAAGGTCTC ATTTATAATT 1380
GGAAGACACA AAGTTAGGAC TGGCCCCTTA AATGAAGATG TATTTGCTGC TCCCAACTAC 1440
ACAGAAGATA AAATCCTTCA TCCTAGCATT CAGGAAATCA CAGAACAAAT ATACCGGCTG 1500
TTGTTACAGC CTGTACACAA CAGTGGATCT AGTGGCTATG GAAGCTTGGG TAGCAATGGA 1560
TCACATGAAC ATTTAATGAG TGTAGCATCA TCCAGTGACA GCAATGGAAA CAACAATGAA 1620
GAGGCCCAAA AGGAGAAGCA TGTGACATGT CATGATGCAC ATATGGTCAG AAATGAAATA 1680
CAACACATTT ACACTAATAG AAGAGTGAAG CTGGAACATA AAAAAAAGGC TTTTGGAGAA 1740
AAAAAAAATT GTCCCAGTGT TTGGATTGAA GATACAACTG AAAAGGATAC TTCTGCCATT 1800
GCTGCTCATA AGGATGTGGT TCCTGAGAAA CTGGCCTGGA AGGAACAGCC TGTGTATTCC 1860
TATCAACAGA TTAGTTGTTT AGATGGTGTC ATCAGGTACT TGGAGAGTTG CAGCCTACCT 1920
GGTACACTAA AGAGAAAATG TGAACCTTCA TCAAATGCTG CTTCACTGGA TTCTAATGAT 1980
CACAAGCAAA AAACCGCTGA TAATTCCATA AAATCATCAG CAGACCCTGC TGTGTTGAAG 2040
ACATCTGATA AATCAAATGG TCCTCCAGTA GTTGGTGCTC ACTTAACTTC TTTGGCTTTA 2100
CCTGGGAAAC CAGAAAGTGT TGTATCTTTC ACCAGTCAGT GCAGCTACAG TAGCACCATA 2160
GTTCATGTTG GGGACAAAAA ACCACAACCT GAATTAGAAA TAATAGAAGA TGGTCCTAGT 2220
GGAACAGAAC TTTTAGACAG TCACCTTCTT GTCCCTCTAT CCAGAACTAC CCATGCAAAC 2280
CAAGAAAAGG AGCCTTTTAA GAAACTGGGA CTTACAAAGG AAATCCTTGC AGTGCATACA 2340
CAAAAAGAAG AGCAGAGCTT TTTGAATAAA TTTAAAGAAA TCAAACGATT CAATATTTTT 2400
CAGTCCCGTT GCAATTATTA TTTACGTGAT AGACCCAGAG GACGTCCTGG TAAACATGGT 2460
ACTCGTGGGC AAAGAAATGG TATTTTTGGA GTAGATCACT CCTGGAGGAA AAGTGGAAAA 2520
AACAGGAAAT CAAAATCAAA ACGAATTAAA CCAAAGGAAT CCTCTGATAG TACAACTTCT 2580
GAAACCAATC CCTCTCATCG ATTCCCTCTG CAAGGCCTAA ATAGTACCGC GTGGTCGTCA 2640
CCATCAGATA CTTCTCAAGC TAGCCATTCA GCCATGTCTT TCCCTGCTGT TATGCCTGCA 2700
TATCCACTCC CAGTTTTTTC AACTGTGCCA CCAGATCCTG AGGCTTGCCT TTCTGGTTTT 2760
AGTGATTTAC CAGATTCTGG AAATAATTGT CCTTTGCAGC TGTCACAGTT CTCTGCACCT 2820
CTTCTAACGC CAGTGGTAGC AGTTGTGCTC CCCAACTATA TGTATACCCA ATTGAACAAT 2880
GATTTACCCC AGACACTTTA TAATTGCCAA CCTAACTTTT CCGCTGACCC TGCTTTCTCT 2940
TCACAGACAA TGCTTTCAGC ACAGCCAACA TTAGCTGCCC CAAATCCTTT TCCTCAACCG 3000
ACTTTCTTTC CAGCACAACC ATTTCATTAT AAAATACCAG CAGAAAGTGA AAAGGCACCT 3060
GCCATGGAAT CACAAAATGA TGCATCCCAT TCCTCCATGC CACAGTTTCT TGGTCCTCAA 3120
GATCAGGCCT CACCTCCTTT GTTCCAGTCA CGGTGCAGTT CTCCATTACA GTTAAACCTT 3180
CTGCAATTAG AAGAAACCCC CAAAAGTGCT GGAAGTGGAA ATGTTGCTGG TGGTCATAGA 3240
GCTACAATTG AAGTAGGAGC CACAGGCAAA AGCATAACTG ATGACAGCAG CAGAAAAGGA 3300
TCCTCTCCTA TTGATTCTCC AATGGAAGCT CAAAATAGTG ATGCCCTCTC TATGTCCAGT 3360
GATATACTTG ATATTTTACT TCAAGAGGAT GCATGTTCAG GCACTGGCTC AGCTTCATCA 3420
GGAAGTGGTG TATCAGCAGC TGCTGAGTCA TTAGGATCTG GATCCAATGG CTGTGTCATG 3480
TCAGAGAGCA GAACAGGGAG TAGTGAGACA AGTCATACCA GCAAATATTT TGGAAGCATA 3540
GACTCCTCAG AAAATAATCA TCATATGAAA AAGAACGCTG AAGTGGGAAA CAGTGAACAT 3600
TTCATTAAAT ATGTCCTTCA GGATCCCATC TGGTTACTGA TGGCAAACAC AGATGATGCT 3660
GTTATGATGA CTTACCAGAT ACCATCCCGA AATGTAGAAG TGGTTTTAAA AGAGGACAAA 3720
CAGAAATTAA AGCAAATACA GAAATTGCAG CCAAAGTTTA CGGAAGAACA AAAAAAAGAA 3780
CTTATTGAAG TTCATCCATG GATCCAGAAA GGTGGACTTC CAAAAGCAAT TGCTAATTCA 3840
GAGTGTATTT ATTGTGAGGA AAACACACGT AACAGCTTTT ATATACCATA TGAAGAAGAA 3900
GTCCATGAAA TGGAGCTTAA TGAAATGATT GAAGCCAGTG AAGAAAACAA TTTAGCTATC 3960
CTGAAAATTG GTGAAGAACA AACCTAA 3987
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-EqC-020992Equus caballus50 0.00e+00 1122.1
CGD-GaG-021834Gallus gallus65 0.00e+00 1654.8
CGD-HoS-021036Homo sapiens (Human)50.11 0.00e+00 1159.1
CGD-MuM-021066Mus musculus (Mouse)49.21 0.00e+00 1103.6
CGD-OvA-022197Ovis aries41 0.00e+00 805.8
CGD-RaN-022186Rattus norvegicus47.99 0.00e+00 1093.2
Gene Ontology

GO:0005737--cytoplasm
GO:0005634--nucleus
GO:0005515--protein binding
GO:0005654--nucleoplasm