CGDB Gene Information

Tag Content
CGDB ID CGD-MaE-047600
Ensembl Accession ENSMEUP00000003801.1
Protein Name PER2
Ensembl Information ENSMEUG00000004137; ENSMEUT00000004179
Organism Macropus eugenii
NCBI Taxa ID 9315
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 21 ZT 9 LD 6 duodenum Predicted from orthologs Q8QGQ8
ZT 2 ZT 18 LD 3.17 embryos Predicted from orthologs Q8QGQ8
ZT 6 ZT 18 LD 8 embryos Predicted from orthologs Q8QGQ8
CT 12 CT 0 DD1 3 granulosa cells Predicted from orthologs Q8QGQ8
ZT 3 ZT 18 LD 84.29 pineal glands Predicted from orthologs Q8QGQ8
ZT 23 ZT 11 LD 2.25 spleen Predicted from orthologs Q8QGQ8
CT 4 CT 12 DD2 27 aortic smooth muscle cells Predicted from orthologs O15055
ZT 4 ZT 21 LD 5 human HaCaT keratinocytes Predicted from orthologs O15055
ZT 1 ZT 19 LD 2.67 human hair follicle cells Predicted from orthologs O15055
CT 12 CT 0 LL1 3.43 oral mucosa Predicted from orthologs O15055
CT 3 CT 15 DD2 5 U2OS cells Predicted from orthologs O15055
CT 6 CT 18 DD1 4 SCN Predicted from orthologs O54943
CT 9 CT 3 DD1 3 eye Predicted from orthologs O54943
ZT 19 ZT 7 LD 2.5 amygdala Predicted from orthologs O54943
ZT 12 ZT 4 LD 2 bone Predicted from orthologs O54943
ZT 13 ZT 5 LD 2.4 bone marrow Predicted from orthologs O54943
ZT 18 ZT 6 LD 1.89 brain Predicted from orthologs O54943
ZT 15 ZT 23 LD 3 cortex Predicted from orthologs O54943
ZT 13 ZT 2 LD 10 heart Predicted from orthologs O54943
ZT 13 ZT 1 LD 2.5 hippocampus Predicted from orthologs O54943
ZT 16 ZT 0 LD 25 jejunum Predicted from orthologs O54943
ZT 15 ZT 23 LD 6 kidney Predicted from orthologs O54943
CT 15 CT 3 DD1 4 liver Predicted from orthologs O54943
ZT 16 ZT 4 LD 7 liver Predicted from orthologs O54943
CT 18 CT 6 DD2 10 MEFs Predicted from orthologs O54943
ZT 17 ZT 1 LD 6 megakaryocytes Predicted from orthologs O54943
ZT 18 ZT 6 LD 3 n primary visualcortex (V1) Predicted from orthologs O54943
CT 0 CT 12 DD2 10 NIH-3T3 cells Predicted from orthologs O54943
CT 12 CT 0 DD3 4.79 ovary Predicted from orthologs O54943
ZT 12 ZT 4 LD 5 pituitary gland Predicted from orthologs O54943
CT 12 CT 20 DD3 5 retina Predicted from orthologs O54943
ZT 12 ZT 16 LD 5 retina Predicted from orthologs O54943
CT 12 CT 20 DD3 6 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
ZT 0 ZT 16 LD 2 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
CT 9 CT 21 DD1 6 SCN Predicted from orthologs O54943
CT 8 CT 16 DD1 20 SCN Predicted from orthologs O54943
CT 15 CT 3 DD1 3 skeletal muscle Predicted from orthologs O54943
CT 14 CT 2 DD3 12 suprachiasmatic nucleus (SCN) Predicted from orthologs O54943
ZT 16 ZT 4 LD 9 abdominal adipose tissue Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 anterior cingulate Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 2.05 area postrema Predicted from orthologs Q9Z301
ZT 18 ZT 2 LD 6.38 AV3V Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 14 basolateral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 10 ZT 6 LD 2 caudal ventrolateral medulla Predicted from orthologs Q9Z301
CT 12 CT 8 DD17 4.35 colon Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 3.29 dorsal vagal motor nucleus Predicted from orthologs Q9Z301
ZT 2 ZT 14 LD 1.8 dorsomedial nucleus Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 5.5 entral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 5.7 heart Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 15 hippocampus Predicted from orthologs Q9Z301
ZT 16 ZT 3 LD 57 intestinal jejunal mucosa Predicted from orthologs Q9Z301
CT 16 CT 4 DD17 5 liver Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 8.5 liver Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q9Z301
ZT 0 ZT 12 LD 7 nucleus accumbens shell Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.07 nucleus ambiguus Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.63 paraventricular nucleus Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 4 prefrontal cortex Predicted from orthologs Q9Z301
ZT 12 ZT 8 LD 2.5 PVN Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 rostral agranular insula Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 3.92 SCN Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
Descriptionperiod circadian clock 2 [Source:HGNC Symbol;Acc:HGNC:8846](View all)
Protein Sequence
(Fasta)		 MNECSEVASD HCSGTEGQRK PRPNAAALQD IEMSSGSSGN EINENDFSGQ ESPGNDSDEN 60
GKDSAMLVES SESHKSSNAF SLMIVNSDRN LSTSGCSSEQ SAKAKTQKEL IKTLKELKGH 120
LPLDRKTKGK SSMLATLKYA LRSIKQIKAN EEYYQLLMTS DNHSADLDVP SYTVQEIETL 180
TSEYIMKNVD MFAMAVSLVT GKIVYVSDQA TSILPCKKDT FHNAKFVEFL APHDVSVFHG 240
STAPSRLPAW RVCRRAXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 300
XXXXXXXXXX XXXXXXXXXX XXPRIPPDKR IFTTTHTPNC LFQDVDERAV PLLGYLPQXX 360
XXXXXXXXXX XXXXXXXXXX XXXXLQYGGQ PFDYSPIRFC TRNGEYITMD TSWSSFINPW 420
NRKVSFIIGR HKVRTGPLNE DVFAVHSCTE EKTPHPSVQE ITEQIYRLLL QPVHNSGSSG 480
YGSLGSNGSH EHLMSQTSSS DSNGHLHEDL RKRRPSQTHL IGQTKTVLAP EKDEAGLPKN 540
VMTEELACRN QSAYSYQQIS CLDSVIRYLE SCSVAGPLKR KCESXXXXPS KANGRPAVGA 600
HLTPLALPGK AESVVSFTSQ CSYSSTLVHV GDKKLQPESE MIEDPASGVE SLDSAAAPSS 660
HCDSSLEKGP PKKVGLTKEV LAVHTQREEQ SFLHKFKETR RLSTFQSRCH YYLQERSKGR 720
SGERVVRGPR NSISGMDSSC KKSANSKQKS TRIKPHESSD STTSGTHIPP QSLLVGLNST 780
ACSPSDXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 840
XXXXXXXXXX XTPVMAVMLP NYTFPTMNPT GHPPFYPGQS NCSQHPACAS QMVFAAQQDF 900
PVQSLIISDI LPRQSYNYPA SGGPEGPSRS MDRTSPPLFQ SRCSSPLQLN LLQLEEMPKS 960
SETSHTSKYF GSVDSSEDSH RAKVDTGLPG SGHFLKCVLQ DPVWLLMANT NNDVMMTYQL 1020
PARNLEAVLK EDRERLKVMQ KLQPKFTDEQ KRELHAVHTW MPRGGLPRAL DVVMCPDCED 1080
SQRDRVDGPY DEDLPAMELS EMMTTQGEKG VQPTPRGTKE ET 1122
Nucleotide Sequence
(Fasta)		 ATGAATGAGT GTTCTGAAGT GGCTTCTGAC CATTGTAGTG GAACCGAAGG TCAGAGGAAG 60
CCAAGGCCTA ATGCGGCCGC CCTCCAAGAC ATCGAAATGA GCAGTGGATC AAGTGGAAAT 120
GAAATTAATG AGAATGACTT CAGTGGGCAG GAGTCTCCTG GCAATGACTC TGATGAAAAT 180
GGGAAAGATT CTGCCATGTT GGTGGAGAGC TCCGAGAGCC ATAAGAGTTC AAATGCTTTT 240
AGCCTGATGA TTGTAAACTC TGACCGTAAT CTGTCTACCA GTGGATGCAG CAGTGAGCAG 300
TCAGCCAAAG CCAAGACTCA GAAAGAATTG ATTAAAACGT TGAAGGAACT GAAAGGCCAC 360
CTACCTCTGG ACAGGAAGAC CAAAGGCAAG TCCAGCATGT TGGCGACCTT GAAGTATGCC 420
CTGCGCAGCA TTAAACAAAT CAAAGCCAAT GAAGAGTATT ATCAGCTCTT AATGACCAGT 480
GACAACCATT CAGCTGATCT GGATGTGCCT TCTTACACAG TCCAGGAGAT CGAGACCCTG 540
ACGTCAGAAT ACATCATGAA GAATGTGGAT ATGTTTGCTA TGGCTGTTTC CTTGGTTACT 600
GGAAAGATCG TATATGTCTC TGATCAGGCC ACATCAATTC TTCCCTGTAA GAAAGACACA 660
TTTCACAATG CCAAGTTTGT GGAGTTCCTG GCGCCCCATG ACGTGAGCGT GTTTCACGGC 720
TCTACAGCCC CATCCCGCCT CCCAGCTTGG CGTGTTTGCC GCAGAGCTGN NNNNNNNNNN 780
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 840
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 900
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 960
NNNNCACCCA GGATTCCGCC AGATAAGAGA ATATTTACAA CAACGCACAC CCCAAATTGT 1020
TTGTTTCAAG ATGTAGATGA AAGAGCGGTT CCTCTCTTGG GCTACCTACC TCAGNNNNNN 1080
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1140
NNNNNNNNNN TCCTACAGTA TGGTGGACAG CCTTTTGACT ACTCACCAAT CAGATTCTGC 1200
ACTAGAAATG GAGAGTACAT AACAATGGAC ACCAGCTGGT CCAGTTTCAT CAATCCTTGG 1260
AACAGAAAAG TTTCTTTTAT AATTGGAAGA CATAAAGTGA GGACGGGGCC TTTGAATGAA 1320
GATGTCTTTG CTGTTCATTC CTGCACAGAA GAGAAAACCC CTCATCCCAG TGTTCAGGAG 1380
ATCACAGAGC AGATATACAG GCTGTTACTG CAGCCCGTGC ACAACAGCGG CTCCAGCGGC 1440
TACGGCAGCC TGGGCAGTAA CGGCTCCCAT GAGCATCTCA TGAGTCAGAC GTCTTCCAGT 1500
GACAGCAACG GTCACCTCCA CGAGGACTTG CGGAAAAGGA GGCCTAGTCA GACTCATTTG 1560
ATTGGTCAAA CCAAAACTGT ATTGGCTCCT GAGAAGGACG AGGCCGGCTT GCCAAAAAAT 1620
GTGATGACAG AGGAGCTGGC CTGTAGGAAC CAATCTGCGT ACTCCTACCA GCAGATAAGC 1680
TGCTTGGACA GCGTTATCAG GTACTTGGAG AGCTGCAGTG TGGCTGGGCC CCTGAAGCGG 1740
AAGTGTGAGT CCCNNNNNNN NNNGCCATCC AAAGCAAATG GCCGCCCGGC TGTCGGTGCC 1800
CACTTGACCC CCTTGGCTCT CCCTGGCAAG GCTGAGAGTG TGGTCTCCTT CACCAGTCAG 1860
TGCAGCTACA GCAGCACCCT GGTCCACGTC GGCGACAAGA AGCTGCAGCC TGAGTCAGAG 1920
ATGATAGAAG ACCCTGCGAG TGGTGTGGAG TCACTGGACA GTGCAGCTGC CCCGTCCTCT 1980
CACTGTGACT CCAGCCTGGA GAAGGGGCCC CCCAAGAAGG TGGGCCTCAC CAAAGAGGTG 2040
CTCGCAGTGC ACACGCAGAG AGAAGAGCAG AGCTTCTTGC ACAAATTTAA GGAAACAAGA 2100
AGACTCAGCA CATTTCAGTC TCGCTGCCAT TATTACTTGC AGGAGAGATC CAAGGGGCGG 2160
TCTGGAGAAC GTGTTGTTCG AGGACCCAGA AATAGTATTT CTGGAATGGA TTCATCTTGC 2220
AAAAAAAGTG CAAACTCAAA ACAGAAGTCC ACGCGAATTA AGCCACACGA ATCATCAGAT 2280
AGCACAACTT CGGGCACACA CATCCCTCCA CAGTCACTGC TGGTTGGCCT GAATTCTACC 2340
GCATGCTCAC CATCAGATAN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2400
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2460
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2520
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNGACCCCGG TAATGGCCGT GATGTTACCC 2580
AATTACACAT TCCCTACAAT GAACCCTACT GGGCACCCAC CGTTCTACCC TGGCCAAAGT 2640
AACTGTTCCC AGCATCCTGC TTGTGCTTCC CAGATGGTGT TTGCAGCCCA ACAGGACTTC 2700
CCTGTTCAGA GTTTGATCAT ATCAGACATT CTGCCCAGAC AGTCCTATAA TTATCCTGCC 2760
TCCGGGGGCC CTGAAGGGCC ATCAAGATCC ATGGACAGGA CCTCGCCACC GCTGTTCCAG 2820
TCACGCTGTA GTTCCCCCTT ACAGCTCAAT CTGCTCCAGC TGGAAGAAAT GCCCAAGAGC 2880
AGTGAGACGA GCCACACGAG CAAATACTTT GGAAGCGTCG ATTCCTCGGA AGACAGTCAT 2940
CGGGCCAAAG TTGACACCGG CCTCCCGGGC AGTGGGCACT TCCTCAAATG CGTCCTGCAG 3000
GACCCAGTCT GGCTGCTGAT GGCAAACACC AATAATGACG TCATGATGAC CTATCAGCTG 3060
CCTGCCCGAA ATCTAGAAGC TGTTCTGAAG GAAGATCGGG AAAGGTTGAA GGTCATGCAG 3120
AAACTGCAGC CCAAGTTCAC AGACGAGCAG AAGCGAGAAC TGCATGCGGT CCACACGTGG 3180
ATGCCCAGGG GAGGCCTGCC CAGAGCGCTC GACGTGGTGA TGTGCCCTGA CTGTGAGGAC 3240
AGCCAGAGAG ACCGCGTCGA TGGGCCATAT GACGAGGACC TTCCAGCGAT GGAACTCAGT 3300
GAAATGATGA CCACCCAGGG CGAGAAGGGT GTCCAGCCCA CACCTCGAGG GACCAAAGAG 3360
GAGACCTAG 3369
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-GaG-021834Gallus gallus56.8 0.00e+00 819.7
CGD-HoS-021036Homo sapiens (Human)53.03 0.00e+00 802
CGD-MuM-021066Mus musculus (Mouse)55.84 3.00e-141 501.1
CGD-RaN-022186Rattus norvegicus54.88 3.00e-138 490.3
Gene Ontology

GO:0005737--cytoplasm
GO:0005634--nucleus
GO:0005515--protein binding
GO:0005654--nucleoplasm