CGDB Gene Information

Tag Content
CGDB ID CGD-LeO-053401
Ensembl Accession ENSLOCP00000005318.1
Protein Name per2
Ensembl Information ENSLOCG00000004441; ENSLOCT00000005326
Organism Lepisosteus oculatus
NCBI Taxa ID 7918
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 6 ZT 18 LD 5 skeletal muscle Predicted from orthologs F6ZZH0
ZT 21 ZT 9 LD 6 duodenum Predicted from orthologs Q8QGQ8
ZT 2 ZT 18 LD 3.17 embryos Predicted from orthologs Q8QGQ8
ZT 6 ZT 18 LD 8 embryos Predicted from orthologs Q8QGQ8
CT 12 CT 0 DD1 3 granulosa cells Predicted from orthologs Q8QGQ8
ZT 3 ZT 18 LD 84.29 pineal glands Predicted from orthologs Q8QGQ8
ZT 23 ZT 11 LD 2.25 spleen Predicted from orthologs Q8QGQ8
CT 4 CT 12 DD2 27 aortic smooth muscle cells Predicted from orthologs O15055
ZT 4 ZT 21 LD 5 human HaCaT keratinocytes Predicted from orthologs O15055
ZT 1 ZT 19 LD 2.67 human hair follicle cells Predicted from orthologs O15055
CT 12 CT 0 LL1 3.43 oral mucosa Predicted from orthologs O15055
CT 3 CT 15 DD2 5 U2OS cells Predicted from orthologs O15055
CT 6 CT 18 DD1 4 SCN Predicted from orthologs O54943
CT 9 CT 3 DD1 3 eye Predicted from orthologs O54943
ZT 19 ZT 7 LD 2.5 amygdala Predicted from orthologs O54943
ZT 12 ZT 4 LD 2 bone Predicted from orthologs O54943
ZT 13 ZT 5 LD 2.4 bone marrow Predicted from orthologs O54943
ZT 18 ZT 6 LD 1.89 brain Predicted from orthologs O54943
ZT 15 ZT 23 LD 3 cortex Predicted from orthologs O54943
ZT 13 ZT 2 LD 10 heart Predicted from orthologs O54943
ZT 13 ZT 1 LD 2.5 hippocampus Predicted from orthologs O54943
ZT 16 ZT 0 LD 25 jejunum Predicted from orthologs O54943
ZT 15 ZT 23 LD 6 kidney Predicted from orthologs O54943
CT 15 CT 3 DD1 4 liver Predicted from orthologs O54943
ZT 16 ZT 4 LD 7 liver Predicted from orthologs O54943
CT 18 CT 6 DD2 10 MEFs Predicted from orthologs O54943
ZT 17 ZT 1 LD 6 megakaryocytes Predicted from orthologs O54943
ZT 18 ZT 6 LD 3 n primary visualcortex (V1) Predicted from orthologs O54943
CT 0 CT 12 DD2 10 NIH-3T3 cells Predicted from orthologs O54943
CT 12 CT 0 DD3 4.79 ovary Predicted from orthologs O54943
ZT 12 ZT 4 LD 5 pituitary gland Predicted from orthologs O54943
CT 12 CT 20 DD3 5 retina Predicted from orthologs O54943
ZT 12 ZT 16 LD 5 retina Predicted from orthologs O54943
CT 12 CT 20 DD3 6 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
ZT 0 ZT 16 LD 2 retinal pigment epithelium)圧PE) Predicted from orthologs O54943
CT 9 CT 21 DD1 6 SCN Predicted from orthologs O54943
CT 8 CT 16 DD1 20 SCN Predicted from orthologs O54943
CT 15 CT 3 DD1 3 skeletal muscle Predicted from orthologs O54943
CT 14 CT 2 DD3 12 suprachiasmatic nucleus (SCN) Predicted from orthologs O54943
ZT 16 ZT 4 LD 9 abdominal adipose tissue Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 anterior cingulate Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 2.05 area postrema Predicted from orthologs Q9Z301
ZT 18 ZT 2 LD 6.38 AV3V Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 14 basolateral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 10 ZT 6 LD 2 caudal ventrolateral medulla Predicted from orthologs Q9Z301
CT 12 CT 8 DD17 4.35 colon Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 3.29 dorsal vagal motor nucleus Predicted from orthologs Q9Z301
ZT 2 ZT 14 LD 1.8 dorsomedial nucleus Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 5.5 entral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 5.7 heart Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 15 hippocampus Predicted from orthologs Q9Z301
ZT 16 ZT 3 LD 57 intestinal jejunal mucosa Predicted from orthologs Q9Z301
CT 16 CT 4 DD17 5 liver Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 8.5 liver Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q9Z301
ZT 0 ZT 12 LD 7 nucleus accumbens shell Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.07 nucleus ambiguus Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.63 paraventricular nucleus Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 4 prefrontal cortex Predicted from orthologs Q9Z301
ZT 12 ZT 8 LD 2.5 PVN Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 rostral agranular insula Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 3.92 SCN Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
Descriptionperiod circadian clock 2 [Source:ZFIN;Acc:ZDB-GENE-011220-2](View all)
Protein Sequence
(Fasta)		 MSEDQGTGRY LYSTLEEQTT SPRFAYGDDA PGRSPAPPRH RMSGFADAGR RDAELALHSD 60
GSDSSRDQRA SPRRDPHALH EDVEMKSSDS SANDSHGHES PGSSHGHGKD SALLESSESH 120
KSSNSQSPSP PSSSNAFSLL SASSEPDNPS TSGCSSEQSA KAKTQKELIK TLKELKVHLP 180
PENRSKGKSS TLSTLKYALR CVKQVKANEE YYQLLMINDS QPSGLDVSSY TIEEIDSITS 240
EYTLKNTVSM LYYKEISVEL PVSQIVFFSY ICWGLINCSK SLLRRNLICV IILPFASKRL 300
KNKCMHFHYS VFIFSESSPS DCVQEKSFFC RISGGRERDG DIHYYPFRMT PYLMKVQDTE 360
HTEDQFCCLL LAERVHSGYE GITAPRIPTD KRIFTTTHTP SCVFQDVDER AVPLLGYLPQ 420
DLIGTPVLLH LHPNDRPLML AIHRKILQYA GQPFDHSSIR FCARNGEYVT LDTSWSSFVN 480
PWSRKVSFVI GRHKVRTGPV NEDVFAAPAF TEGKIVDSDI QEITEQIHRL LLQPVHNNGS 540
SGYGSLGSNG SHEHIMSVAS SSESNGNANE DSCKLKPRTF QEICKGVQML KNQGQQVFIT 600
STAKPEGKRA SGESAKSVNT RAKDSPVITG KENVNLDDKT SAHEELSYKD QTVYSYQQMS 660
CLDSVIRYLE SCNIPITVKR KCESSSNTTS SNSDDDKQKV ADDNMQVSEA APPVLEAQAG 720
LPSLKAPKKT ATAAVVGASL TPLALPSKAE SVVSITSQCS YSSTIVHVGD KKPQPESEII 780
EDGPNAADAA ESQPPALAAS TVSPLSQEKE TYKKLGLTKQ VLAAHTQKEE QAFLSRFREL 840
RGAATVESTC GFHLQEKNKR SEGVPGPRVT RQGGRGAEAA AKKSGKNKKT KSKRIKQQES 900
SDSTASHRKQ PHRPPLVGLN HTSWSPSDTS QSTFPAMPFP TVMPAYPMQV FPAGGAVPPG 960
ADPAMSGFGD GQNTQDIRCP VQPPAYPTPL VTPMVAFVLP NYVFPQMSGS ACQPLYPEQT 1020
SFPAHSAFPG PSQFAPQNPF PVQPPFPGQP FHYGVPPEAP KTPAAAEPRE GPSRSSTPQS 1080
AGARDPASPP LFQSRCSSPL QLNLLQLEEA PRSVERADNA GDKGAASSTA QPDEEPQPVG 1140
SPGDGPNSDA HSTSSDLLDI LLQEDSRSGT GSATSGCGGS ATSGSLGSGS NGCSTSASGT 1200
GSSQTSNTSK YFGSIDSSEN DHKTKKGEGG MELEESDHLI KYVLQEPIWL MMANADEKVM 1260
MTYQIPSRDL QTVLKEDREK LKQMQKRQPR FTEEQRKELL EVHPWMKKGG LPKAIDVTEC 1320
VCCEDGASAL FEVDMPDIEL EAMVDPGEDN HLKALSKGSE EQIPAEESCS TKTDCYLAKE 1380
EKPSV 1385
Nucleotide Sequence
(Fasta)		 ATGTCTGAAG ATCAGGGTAC CGGGAGGTAC CTGTACTCCA CCTTAGAGGA GCAGACCACC 60
AGCCCGCGCT TCGCCTACGG AGACGACGCG CCGGGCCGCT CGCCCGCCCC GCCGCGGCAC 120
AGGATGAGCG GCTTTGCGGA CGCGGGCCGG CGGGACGCGG AGCTGGCCCT CCACTCCGAC 180
GGCAGCGACA GCAGCCGGGA CCAGCGGGCC TCCCCCCGGC GGGACCCGCA CGCCCTGCAC 240
GAGGACGTGG AGATGAAGAG CAGCGACTCC AGCGCCAACG ACTCCCACGG GCACGAGTCG 300
CCGGGGAGCT CCCACGGCCA CGGGAAGGAC TCCGCCCTCC TGGAGTCGTC GGAGAGCCAC 360
AAGAGTTCGA ACTCTCAGAG TCCATCTCCG CCCAGCAGTT CAAATGCCTT CAGTCTCCTC 420
AGTGCCAGTT CGGAGCCTGA CAACCCCTCC ACAAGTGGCT GCAGTAGCGA ACAGTCTGCC 480
AAAGCCAAGA CCCAGAAAGA GTTGATCAAG ACGCTTAAAG AGCTCAAAGT GCACCTCCCT 540
CCAGAGAATA GAAGCAAGGG AAAGTCCAGC ACACTGAGCA CCCTGAAGTA CGCGCTGCGT 600
TGTGTCAAAC AGGTCAAAGC CAATGAAGAG TACTACCAAC TGCTTATGAT AAATGACAGC 660
CAGCCGTCAG GCCTTGATGT TTCCTCTTAC ACAATTGAAG AGATAGACAG CATTACTTCG 720
GAGTACACAT TGAAAAACAC TGTAAGCATG CTGTACTATA AGGAAATATC TGTGGAACTC 780
CCCGTTTCAC AAATAGTGTT TTTTTCATAC ATATGCTGGG GTCTTATTAA CTGTTCTAAA 840
AGCCTGTTGC GCAGAAATTT AATTTGTGTA ATAATATTGC CTTTTGCTTC TAAAAGATTG 900
AAAAATAAAT GCATGCATTT TCATTATTCT GTTTTTATTT TTTCAGAATC CTCTCCTTCA 960
GACTGTGTAC AAGAAAAGTC TTTTTTCTGC CGCATAAGCG GGGGCAGGGA GCGAGACGGG 1020
GACATACACT ACTACCCTTT CCGCATGACT CCATACCTCA TGAAAGTCCA GGACACGGAA 1080
CACACAGAGG ACCAGTTCTG CTGCCTGCTG CTCGCTGAAA GGGTTCACTC TGGCTATGAA 1140
GGCATTACAG CACCCAGAAT TCCAACCGAT AAAAGGATAT TTACCACTAC TCACACCCCA 1200
AGCTGTGTGT TTCAGGATGT GGATGAGAGA GCTGTTCCTC TCTTGGGGTA TCTGCCTCAA 1260
GATTTGATTG GTACACCAGT TCTGCTACAT CTGCACCCCA ATGATCGTCC ACTGATGTTA 1320
GCCATTCACA GAAAAATCCT GCAATATGCT GGCCAGCCCT TTGATCACTC CTCAATCCGG 1380
TTTTGTGCTC GAAATGGAGA ATATGTGACA CTCGACACCA GCTGGTCAAG CTTTGTGAAT 1440
CCCTGGAGCA GGAAGGTGTC CTTCGTTATT GGGAGACATA AAGTCAGAAC AGGCCCTGTC 1500
AACGAGGATG TGTTTGCAGC CCCTGCATTT ACGGAGGGCA AAATCGTTGA TTCAGACATT 1560
CAGGAGATTA CAGAACAGAT TCACCGACTT CTGCTCCAGC CTGTCCACAA TAATGGTTCC 1620
AGTGGCTATG GAAGCTTAGG AAGCAATGGT TCACATGAGC ACATAATGAG TGTGGCGTCT 1680
TCGAGTGAAA GCAACGGGAA TGCCAATGAA GACTCATGCA AGCTGAAGCC TCGAACGTTC 1740
CAAGAGATTT GTAAGGGTGT GCAGATGCTG AAGAATCAAG GGCAGCAAGT GTTCATCACG 1800
TCTACAGCAA AACCAGAGGG CAAGAGAGCC TCTGGTGAAT CTGCAAAGAG CGTGAACACA 1860
AGAGCCAAAG ATTCTCCTGT GATCACTGGG AAAGAAAATG TGAACCTTGA TGATAAAACA 1920
TCAGCTCATG AAGAACTAAG CTACAAAGAT CAGACTGTGT ATTCATACCA GCAGATGAGT 1980
TGCCTGGACA GTGTTATCAG GTATCTAGAG AGCTGTAACA TCCCCATCAC AGTTAAGAGG 2040
AAATGTGAAT CCTCTTCTAA CACCACATCA TCCAACTCCG ATGATGATAA ACAGAAAGTT 2100
GCGGATGACA ACATGCAAGT TTCAGAAGCA GCCCCCCCAG TGTTAGAGGC TCAAGCTGGT 2160
CTCCCTTCCC TGAAGGCGCC CAAGAAAACG GCTACGGCAG CGGTTGTTGG CGCTTCACTG 2220
ACCCCACTTG CTCTCCCGAG CAAGGCTGAG AGTGTTGTGT CCATTACCAG CCAGTGCAGC 2280
TACAGTAGCA CTATTGTTCA CGTTGGGGAC AAGAAACCAC AACCTGAATC TGAAATAATT 2340
GAGGACGGTC CCAATGCCGC TGATGCTGCC GAGAGCCAGC CCCCAGCTCT GGCTGCCAGT 2400
ACGGTATCGC CACTGAGCCA GGAGAAGGAG ACCTACAAGA AGCTGGGCCT GACGAAGCAG 2460
GTCCTGGCAG CACACACCCA GAAGGAAGAG CAGGCCTTTC TCAGCCGGTT CAGGGAGCTG 2520
CGCGGGGCGG CCACTGTGGA GTCCACCTGC GGCTTCCACC TACAAGAGAA AAACAAGCGT 2580
TCAGAAGGAG TTCCTGGTCC ACGCGTGACC AGGCAAGGTG GGCGCGGCGC TGAGGCCGCC 2640
GCTAAGAAAA GTGGGAAGAA TAAGAAGACG AAGTCCAAAC GGATCAAACA GCAGGAGTCG 2700
TCAGACAGCA CCGCCTCCCA CAGGAAACAG CCCCACAGGC CCCCTCTGGT GGGCCTCAAC 2760
CACACCTCCT GGTCCCCTTC GGACACGTCT CAGTCCACCT TCCCTGCCAT GCCCTTCCCG 2820
ACGGTGATGC CTGCCTACCC GATGCAGGTC TTTCCCGCTG GGGGGGCCGT GCCCCCGGGC 2880
GCTGACCCGG CCATGTCCGG CTTCGGGGAC GGCCAGAATA CCCAGGACAT CCGCTGCCCA 2940
GTGCAGCCCC CTGCCTACCC CACCCCTCTG GTCACTCCCA TGGTGGCATT TGTGCTGCCC 3000
AACTACGTGT TCCCGCAGAT GAGCGGCTCC GCCTGCCAGC CCCTTTACCC CGAACAGACG 3060
TCGTTCCCCG CCCACTCGGC CTTTCCAGGC CCGTCCCAGT TCGCCCCCCA GAACCCCTTC 3120
CCCGTGCAGC CCCCGTTCCC GGGGCAGCCG TTCCATTACG GCGTCCCGCC GGAGGCTCCG 3180
AAGACCCCCG CTGCCGCCGA GCCGCGGGAG GGCCCGTCGC GCTCGTCCAC CCCCCAGTCG 3240
GCGGGGGCGC GGGACCCCGC CTCCCCGCCG CTGTTCCAGT CGCGGTGCAG CTCCCCCCTG 3300
CAGCTCAACC TGCTGCAGCT GGAGGAGGCC CCCCGCTCGG TGGAGAGAGC GGACAACGCC 3360
GGAGACAAGG GGGCAGCGTC CAGCACGGCC CAGCCTGACG AGGAGCCTCA GCCCGTTGGG 3420
TCGCCCGGGG ATGGGCCGAA CAGCGACGCC CACTCCACCT CCAGCGACCT GCTGGACATC 3480
CTGCTGCAGG AGGACTCGCG CTCCGGGACA GGCTCGGCAA CTTCAGGCTG CGGCGGGTCC 3540
GCCACCTCGG GGTCACTGGG CTCCGGATCC AACGGCTGCA GCACGTCGGC CAGCGGCACA 3600
GGGAGCAGCC AAACGAGTAA CACCAGCAAG TACTTTGGAA GCATTGACTC TTCGGAGAAC 3660
GACCACAAAA CGAAGAAGGG GGAAGGGGGC ATGGAGCTGG AAGAAAGCGA CCACCTCATA 3720
AAATACGTCC TGCAGGAACC TATCTGGCTG ATGATGGCCA ATGCAGATGA GAAGGTTATG 3780
ATGACCTATC AGATTCCCTC GAGGGATTTG CAGACCGTTC TCAAAGAAGA CCGGGAGAAG 3840
TTGAAGCAGA TGCAGAAAAG GCAGCCCAGG TTCACGGAAG AGCAGAGAAA AGAGCTGTTG 3900
GAAGTTCACC CCTGGATGAA GAAGGGTGGC TTGCCTAAGG CTATCGATGT CACGGAATGT 3960
GTTTGCTGTG AAGATGGAGC ATCAGCCTTA TTTGAGGTGG ACATGCCCGA CATTGAACTT 4020
GAAGCCATGG TTGACCCTGG CGAGGACAAT CATTTAAAAG CCTTGAGTAA AGGCAGCGAA 4080
GAGCAAATAC CAGCAGAAGA GAGCTGCTCT ACAAAGACTG ACTGCTACCT GGCAAAAGAG 4140
GAGAAACCAT CCGTGTAAAA CATCAGCCAT TCCATTGACA CAAGCTTGGG CTTTTTGGAA 4200
AACATTCCTG ATGGATACTG TGTATTGAAT TCAGTTGTCT GTACTGAATT GGAATTCTGT 4260
AAAAAGACTG TGCTTAAACA TTTATATGGC AACAGTGTTG TCACTGACAT ACTTATTTTT 4320
GTCGAACATA TCAGCACTTA TTAATCTGTG GCATTTTTCT CCTCCTCTCT CCTGGATCCA 4380
CTTTTGTTTC TGTTGTAAAG TCCGTTTTGC TCATTAACAC AGTTTGAATG GACTGGAATT 4440
TTATCTGAGC TGTGTTTTTT AATCTTTTTT TATATATTTT TTATATTTAA ATAAAAAAAT 4500
ATTTAATTGT GTTACTCACG TCACATAGGT CACATTTTAA GAACTACATG CAGAAGATGT 4560
TCCTTCGGGA GCTGAGGCGT CCTAGTGTCG AGTGAGCTAT CCTAAGTGAC CATTTGAAAA 4620
GATTGCACTT GGATTTGTTA GTTTGGTTGT GGCAAAAGTT CTAGTGTTTT TATACTGAAA 4680
GGAAAATGAA TCTTTTTAGC TGATGAGGGC AAGAGCTTTT TTTAAAATGT AAGATAATCT 4740
CAATACACTG AATATCATAG GAAATGGAGT TATGTTTTCA AGATGTAAAA TGACTCTGAT 4800
TGGGATCACC TATTTTTTTA TAACTGCACA CAAAATTGGT GTCATACTTG ACGTATGACA 4860
AAAAAGAGTT ATGTACATAT TTTATTTTGA CACTGAGTAG TTAGACCAAA AGAATGCTCT 4920
AAGAAGAAAT ATTTTTATTT TATTTTTGTA GCTTCAGGCC AAATGAGGGG ATATTCTGTA 4980
TTTAATTGTG TGTAAGGATT GGCTGTCACT GAGCCTAGGT CACCGAAATT CAACTAGTGA 5040
TTATTTTCAC AGGTTTTACA GATCTAAGAT GCATTATACA ACAGCTAGCA CAAGTAGCCA 5100
TTTACCCAAA GACCAGTCAC TGAGCTTGGA GAGGGTTTGA GAGAACCTTC TGAACTTTAA 5160
GGCAAGTTGT TCAATATGTG AATCTCCTCT AAAACTGAAA AGCTTTAATT AACAAAAATT 5220
AGCAAACTAT TGAAAACATG TTGCCCTCAT TAGAATGTTA GTTGGACCCA GAGAGCACGA 5280
CAGCTGTTTA TTACTTTGAA AAGAAAATAA CTATCCAACA AGGTTGACTA GAAGGATCTT 5340
CTAAATCAGA ATGGCATAGC AGAAAATTAA CAGCCATTTC AGTTACTGTA GTGGTAGCCT 5400
TCATGGACTT TACTGCACAT ACAAAAATAG ACTTTTAATG ATTGTGGACA ATGTCAGCAC 5460
TCTAAAACTA TTTCTTGATG TCAATGTAAA TTTCCAGTCA AACTTCTGTT TTCTATTTTT 5520
ACTGTTTTAT CTGTTTGCCC CTGTACCAAT GAGTGGTATG TTTTATTACT GTCTTACTTT 5580
TGTAGAAAAT GGGGAAAAAA AGACTTGTCT TGTGTTGTGA GACAGACTGT TCACACAGTA 5640
CTGTAATAAA CATTTCACTT AAGACTATGT GTATGAGTTA TGATTTATGC TACTGGTA 5698
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-EqC-020992Equus caballus43.77 0.00e+00 904.8
CGD-GaG-021834Gallus gallus48.99 0.00e+00 1092
CGD-HoS-021036Homo sapiens (Human)45.42 0.00e+00 939.9
CGD-MuM-021066Mus musculus (Mouse)44.77 0.00e+00 902.5
CGD-RaN-022186Rattus norvegicus44.87 0.00e+00 898.3
Gene Ontology

GO:0005515--protein binding
GO:0006355--regulation of transcription, DNA-templated