CGDB Gene Information

Tag Content
CGDB ID CGD-GaM-021007
Uniprot Accession H8ZXB9; H8ZXB9; H8ZXB9_GADMO
Protein Name Period 2
Gene Name Per2
EMBL (Genbank) ID AFC93486.1
Organism Gadus morhua
NCBI Taxa ID 8049
Circadian Information
Evidence Phase Amplitude
(FOLD)		 Sentence Tissue/Cell Data type PMID
Peak Trough External
condition
Small-scale ZT 19 ZT 7 LD 2.00 The expression of arntl2, cryptochrome2 (cry2), period 2a (per2a) and nuclear receptor subfamily 1, group D, member 1 was not rhythmic in muscle explants but photoperiod manipulation had a significant effect on mRNA levels of cry2 and per2a. muscle Small-scale [1]
Protein Sequence
(Fasta)		 SKYFGSIDSS ENDHARKRPV GGSSSGEEQF IKCVLQDPIW LLMATTDDKV MMTYQLPSRD 60
MEAVLRSDRE ALRALQKSQP RFSEEQRREL
Nucleotide Sequence
(Fasta)		 AGCAAGTACT TCGGCAGCAT CGACTCGTCG GAGAACGACC ACGCCCGCAA GCGGCCGGTC 60
GGGGGCAGCA GCAGCGGCGA GGAGCAGTTC ATCAAGTGCG TGCTGCAGGA CCCCATCTGG 120
CTGCTCATGG CCACCACCGA CGACAAGGTC ATGATGACCT ACCAGCTGCC CTCCAGGGAC 180
ATGGAGGCTG TGCTGCGGTC GGACCGCGAG GCGCTCAGGG CCCTGCAGAA GAGCCAGCCG 240
CGCTTCAGCG AGGAGCAGAG GAGGGAGCTG
Sequence Source Uniprot/ENA
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-AiM-053758Ailuropoda melanoleuca55.48 0.00e+00 642.1
CGD-AsO-057931Aspergillus oryzae21.63 6.87e-01 31.96
CGD-AsM-051532Astyanax mexicanus58.6 0.00e+00 831.6
CGD-CaF-064770Canis familiaris53.26 7.00e-178 621.7
CGD-CaP-029122Cavia porcellus53.85 6.00e-176 615.1
CGD-ChS-031205Chlorocebus sabaeus54.28 3.00e-176 616.3
CGD-DaR-072764Danio rerio60.58 0.00e+00 841.6
CGD-DaN-031719Dasypus novemcinctus52.57 4.00e-177 619
CGD-EqC-020994Equus caballus52.41 8.00e-179 624.8
CGD-FeC-031667Felis catus55.17 1.00e-175 614
CGD-GaA-060790Gasterosteus aculeatus63.78 0.00e+00 902.9
CGD-GoG-062877Gorilla gorilla55.15 0.00e+00 634
CGD-HoS-021038Homo sapiens (Human)55.3 0.00e+00 636.3
CGD-LeO-065998Lepisosteus oculatus55.81 0.00e+00 800
CGD-LoA-069322Loxodonta africana52.59 0.00e+00 643.3
CGD-MaM-031836Macaca mulatta54.28 5.00e-176 615.5
CGD-MaP-068251Magnaporthe poae23.41 8.00e-02 35.42
CGD-MuM-031636Mus musculus (Mouse)55.15 9.00e-178 621.3
CGD-MuP-028062Mustela putorius furo53.12 2.00e-170 596.7
CGD-MyL-066363Myotis lucifugus53.02 0.00e+00 634
CGD-NoL-039781Nomascus leucogenys54.74 0.00e+00 632.1
CGD-OcP-070087Ochotona princeps53.3 0.00e+00 633.3
CGD-OrN-042393Oreochromis niloticus70.75 0.00e+00 657.9
CGD-OrL-058700Oryzias latipes64.99 0.00e+00 924.9
CGD-OvA-022197Ovis aries55.39 1.00e-176 617.5
CGD-PaT-040966Pan troglodytes55.6 1.00e-180 630.9
CGD-PeS-061345Pelodiscus sinensis45.43 1.00e-160 564.3
CGD-PhP-063685Physcomitrella patens36.11 6.30e-02 31.96
CGD-PoF-059832Poecilia formosa75.74 0.00e+00 703.4
CGD-PtV-028552Pteropus vampyrus54.41 0.00e+00 632.5
CGD-SaH-069946Sarcophilus harrisii54.15 0.00e+00 661.8
CGD-SoA-065078Sorex araneus53.28 4.00e-180 629
CGD-TaR-053643Takifugu rubripes65.52 0.00e+00 891.7
CGD-TeN-071576Tetraodon nigroviridis76.65 0.00e+00 704.1
CGD-TuT-061692Tursiops truncatus54.04 0.00e+00 634.4
CGD-ViV-034984Vitis vinifera32.58 2.90e-02 35.42
CGD-XiM-048808Xiphophorus maculatus66.75 0.00e+00 916
Interpro

IPR022728--Period_circadian-like_C
Pfam

PF12114--Period_C