CGDB Gene Information

Tag Content
CGDB ID CGD-PeS-061345
Ensembl Accession ENSPSIP00000005897.1
Protein Name PER1
Ensembl Information ENSPSIG00000005420; ENSPSIT00000005932
Organism Pelodiscus sinensis
NCBI Taxa ID 13735
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 19 ZT 7 LD 2 muscle Predicted from orthologs H8ZXB9
Descriptionperiod circadian clock 1 [Source:HGNC Symbol;Acc:HGNC:8845](View all)
Protein Sequence
(Fasta)		 MLVGLAQEPP GAPESREGHA NSNGSSGNES QSHDSLRSDH SSSGNGKDSA LLETTESSKS 60
TNSQSLSPPS SSIAYSLLST SSEQDNPSTS GCSSEQSARV KTQKELMKAL KEMKIRLPSE 120
KRGKGQSGTL ATLQYALSCV KQVQGTSHDY YQQWTIDEGQ PCALDVSSYT IEELESITSE 180
YTLKNPDTFA VAVSFVTGKI LYISDQAAFI LRCKRDVFKG ATFAEFLAPQ DVSIFYGSTA 240
PYHLPSWSAC TSASECPPSG GRTRGRELCY SPFRLTPYLA KVRPSDSSDG QPCCLLIAER 300
IHSGYEAPRI PPDKRIFTTR HTPSCLFQDV DERAAPLLGY LPQDLIGTPV LFYLHPEDRP 360
LMLAIHKKIL QYGGQPFDHS PPRFCTRNGE YATIDTSWAR LVHRHKVRTG PLNEDVFTAP 420
KALKMRPLEP DVQELSEQIH RLLLQVGPAP FLAWTPFHYP KPSLMTFQQF CKDVHMVKSQ 480
GQQVFIESRV KPPAGKPPCA GLETLRAGGG PGRRALCEAE QGPGQVAASE ESLRKEPSNY 540
SYQQINCLDG IIRYLQSCNI PSRVKRKCGS SSYTGSSHSD DDKQKTSKEV ASSARGTVLS 600
ILGCLALFPP PRPPRSRSLT PVHLSSAQGP PPPSLTPRCL FEQMWRSAEL LAKLPLGDDI 660
VMMEEGPGPM PPALLPSAPP DREQYRRVGL TKEVLSTHTQ HFKDLSRLHV FDAPAGRSQH 720
EGRGAEPGAP CRVEVHTPVA QSWVQPCSRD GPGCWLKSRV DSCSPRGWAS RALSVSSAGW 780
DSPAGCGQVH SEGGSEARGQ APCPQRAPFC LEGLREGPFG VAGASRAPLA PRWLGMAALR 840
RLGSCSGLTP GADVLIFKYR NTMRAGHTLN QGSLRWDLWQ REQRLHLSKR AGSVGAGEQF 900
IRYVLQDPIW LLMANSDEKV MLTYQLPSRP MAAVLQEDRE KLKQMQKQQP RFTEEQKREL 960
AEVHPWMKKG LLPKAINIRA CVDCGSNPAS RVAPLYDVEL PDMDLSTMLE PMEEGSG 1017
Nucleotide Sequence
(Fasta)		 GTACAGCCTA CGATTTCTCT GCTCAGGTCT GTCTCCCACC CCAGCCGCCG AACACCCCCA 60
CGCACCCCTG TTCCTGAGGG CCGGGTGATG TCCCCGGTTC TCCCCCGATC ATGAGCACCA 120
CCTGTGAGCA GAGGCAGGTA TCCTTTGAGG GCAGCAGCGG GGGCAATGTT GGTGGGGCTG 180
GCTCAGGAGC CCCCCGGCGC ACCCGAGTCC CGCGAGGGGC ACGCCAATAG CAACGGTTCC 240
AGTGGCAACG AGTCGCAAAG CCACGATTCC CTGCGCAGCG ACCACAGCAG CAGTGGGAAC 300
GGCAAGGACT CAGCGCTGCT GGAGACAACC GAGAGCAGCA AAAGCACCAA CTCCCAGAGC 360
CTGTCGCCCC CCAGCAGTTC CATCGCCTAC AGCCTGCTGA GCACCAGCTC CGAGCAGGAC 420
AACCCCTCCA CCAGCGGCTG CAGCAGTGAG CAATCGGCGC GAGTGAAGAC CCAGAAGGAG 480
CTGATGAAAG CGCTGAAGGA GATGAAGATC CGGCTGCCCT CGGAAAAGCG CGGCAAGGGT 540
CAGTCGGGCA CCCTGGCCAC CCTGCAGTAT GCGCTGTCCT GCGTCAAGCA GGTCCAAGGT 600
ACGAGCCACG ACTACTACCA GCAATGGACC ATTGATGAGG GCCAGCCCTG CGCCCTGGAC 660
GTCTCCAGCT ACACCATCGA GGAGCTGGAG AGCATCACCT CCGAGTACAC CCTCAAGAAT 720
CCAGACACCT TTGCCGTGGC TGTCTCCTTC GTCACCGGCA AGATCCTCTA CATCTCCGAC 780
CAGGCTGCCT TCATCCTGCG CTGCAAGAGG GACGTCTTCA AGGGAGCCAC CTTCGCCGAG 840
TTCCTGGCCC CCCAGGACGT CAGCATTTTC TATGGCTCCA CCGCCCCCTA CCACCTGCCC 900
TCCTGGAGTG CCTGCACTTC TGCCAGTGAG TGCCCCCCAT CCGGAGGCCG CACCCGTGGG 960
CGGGAGCTGT GTTACTCCCC CTTCCGGCTC ACACCCTACC TGGCCAAGGT GCGCCCCTCG 1020
GACAGCTCCG ACGGCCAGCC CTGCTGCCTG CTCATTGCGG AGCGCATCCA CTCGGGTTAC 1080
GAAGCTCCCC GGATCCCACC TGATAAACGG ATCTTCACCA CCCGGCACAC GCCCAGCTGC 1140
CTGTTCCAGG ATGTGGATGA GAGGGCGGCC CCCTTGCTGG GTTACCTCCC CCAGGATCTG 1200
ATTGGGACGC CCGTCCTCTT CTACCTGCAC CCGGAGGACA GGCCACTCAT GCTGGCCATC 1260
CACAAGAAAA TTCTCCAGTA CGGCGGGCAG CCCTTTGACC ACTCCCCCCC CCGCTTCTGC 1320
ACCCGAAATG GCGAGTACGC CACTATTGAC ACCAGCTGGG CCCGCCTTGT TCACCGCCAC 1380
AAAGTCCGCA CGGGCCCTCT CAACGAAGAC GTCTTCACAG CCCCCAAGGC GCTGAAGATG 1440
CGGCCGCTGG AGCCAGACGT CCAGGAACTC TCCGAGCAGA TCCATCGGCT GCTGCTCCAG 1500
GTGGGGCCAG CTCCCTTCTT AGCCTGGACC CCTTTCCACT ACCCTAAGCC CTCCCTTATG 1560
ACCTTCCAGC AGTTCTGCAA AGATGTGCAC ATGGTGAAGA GCCAGGGCCA GCAGGTGTTC 1620
ATTGAGTCCC GCGTCAAGCC GCCGGCTGGC AAACCCCCCT GTGCAGGCCT GGAGACGCTC 1680
AGGGCTGGCG GTGGACCAGG CAGGAGGGCC CTGTGTGAGG CTGAGCAAGG CCCGGGCCAA 1740
GTGGCAGCCT CAGAGGAATC TCTCCGGAAG GAGCCGTCCA ATTACTCCTA CCAGCAAATC 1800
AACTGTTTGG ACGGCATCAT CAGGTATTTG CAAAGCTGCA ACATCCCCAG CCGGGTGAAG 1860
CGGAAATGTG GCTCCTCCTC CTACACTGGC TCCTCCCACT CCGACGATGA CAAACAGAAA 1920
ACCAGCAAGG AAGTGGCCAG CTCGGCACGA GGTACAGTCC TGTCCATCCT GGGGTGCTTG 1980
GCCCTGTTTC CCCCCCCCCG GCCCCCCCGC TCCCGAAGCC TGACACCCGT CCATCTGTCC 2040
TCTGCGCAGG GCCCCCCACC TCCCTCATTA ACCCCTCGTT GTCTCTTTGA ACAGATGTGG 2100
AGGTCGGCTG AGTTGCTGGC GAAGCTCCCA CTGGGGGACG ACATTGTGAT GATGGAGGAG 2160
GGCCCCGGCC CCATGCCCCC AGCTCTCCTG CCCAGCGCAC CACCTGACCG GGAGCAGTAC 2220
CGCCGGGTGG GGCTCACCAA AGAGGTGCTC TCCACGCACA CCCAGCACTT CAAGGACCTA 2280
AGCCGGCTGC ATGTCTTCGA CGCACCAGCC GGGCGCAGCC AGCACGAGGG ACGGGGCGCC 2340
GAGCCAGGTG CGCCTTGTAG AGTCGAAGTG CACACGCCGG TTGCACAGTC CTGGGTGCAG 2400
CCGTGCAGCA GGGATGGACC AGGCTGCTGG CTTAAATCAA GGGTGGACAG CTGCTCTCCG 2460
AGGGGATGGG CTTCCAGGGC CCTTTCTGTC TCCTCGGCTG GGTGGGACTC CCCAGCTGGC 2520
TGTGGACAAG TGCATTCCGA GGGGGGGTCT GAAGCGCGTG GGCAAGCGCC CTGTCCGCAA 2580
CGGGCCCCGT TCTGTCTAGA AGGGTTGCGG GAAGGTCCAT TCGGTGTAGC TGGTGCCTCT 2640
CGGGCTCCAT TAGCTCCCCG TTGGCTGGGA ATGGCTGCTC TGCGTAGGCT GGGGAGCTGC 2700
TCGGGGCTTA CTCCAGGGGC TGATGTTCTG ATCTTCAAGT ACAGAAACAC CATGCGGGCT 2760
GGGCATACAC TGAACCAAGG ATCCCTCAGG TGGGATTTAT GGCAGAGAGA ACAGAGGCTG 2820
CACCTGTCAA AGCGGGCGGG CAGCGTGGGT GCCGGCGAGC AGTTTATCAG ATACGTGCTG 2880
CAGGACCCCA TCTGGCTGCT CATGGCCAAC AGTGATGAGA AGGTCATGCT GACCTACCAG 2940
CTGCCCTCCC GCCCCATGGC CGCCGTGCTC CAGGAGGATC GGGAGAAGCT GAAGCAGATG 3000
CAGAAGCAGC AGCCGCGCTT CACGGAGGAG CAGAAGAGGG AGTTGGCCGA GGTGCACCCG 3060
TGGATGAAAA AGGGGCTGCT GCCCAAAGCC ATCAACATCA GGGCCTGCGT GGACTGCGGC 3120
AGTAACCCAG CCTCCCGTGT GGCACCACTC TACGATGTGG AGCTGCCCGA CATGGACCTG 3180
AGCACCATGC TGGAGCCCAT GGAGGAGGGC AGTGGC 3216
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-GaM-021007Gadus morhua45.43 1.00e-160 564.3
Gene Ontology

GO:0005737--cytoplasm
GO:0000978--RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0031625--ubiquitin protein ligase binding
GO:0007623--circadian rhythm
GO:0043967--histone H4 acetylation
GO:0032922--circadian regulation of gene expression
GO:0070888--E-box binding
GO:0019900--kinase binding
GO:0043966--histone H3 acetylation
GO:0005634--nucleus
GO:0005515--protein binding
GO:0045944--positive regulation of transcription from RNA polymerase II promoter
GO:0008134--transcription factor binding
GO:0045892--negative regulation of transcription, DNA-templated
GO:0000122--negative regulation of transcription from RNA polymerase II promoter
GO:0000989--transcription factor activity, transcription factor binding
GO:0010608--posttranscriptional regulation of gene expression
GO:0070932--histone H3 deacetylation
GO:0051591--response to cAMP
GO:0000976--transcription regulatory region sequence-specific DNA binding
GO:0031490--chromatin DNA binding
GO:0002028--regulation of sodium ion transport
GO:0042752--regulation of circadian rhythm
GO:2000323--negative regulation of glucocorticoid receptor signaling pathway
GO:0009416--response to light stimulus
GO:0043153--entrainment of circadian clock by photoperiod
GO:0097167--circadian regulation of translation