CGDB Gene Information

Tag Content
CGDB ID CGD-TuT-061692
Ensembl Accession ENSTTRP00000009787.1
Protein Name PER1
Ensembl Information ENSTTRG00000010313; ENSTTRT00000010313
Organism Tursiops truncatus
NCBI Taxa ID 9739
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 12 ZT 0 LD >10 Predicted from orthologs Q65ZG8
CT 0 CT 12 DD2 5.8 gluteal muscles Predicted from orthologs F7AU00
ZT 19 ZT 7 LD 2 muscle Predicted from orthologs H8ZXB9
ZT 4 ZT 21 LD 2 human HaCaT keratinocytes Predicted from orthologs O15534
CT 0 CT 12 DD2 4 U2OS cells Predicted from orthologs O15534
ZT 0 ZT 12 LD 2 muscle Predicted from orthologs W5QC67
ZT 4 ZT 0 LD 5 SCN Predicted from orthologs W5QC67
ZT 12 ZT 0 LD 30 abdominal adipose tissue Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 11 basolateral nucleus of the amygdala Predicted from orthologs Q8CHI5
CT 12 CT 20 DD17 6.25 colon Predicted from orthologs Q8CHI5
ZT 18 ZT 6 LD 2 decidua Predicted from orthologs Q8CHI5
ZT 4 ZT 16 LD 3.5 entral nucleus of the amygdala Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 8 hippocampus Predicted from orthologs Q8CHI5
ZT 9 ZT 0 LD 48 intestinal jejunal mucosa Predicted from orthologs Q8CHI5
CT 12 CT 0 DD17 16.67 liver Predicted from orthologs Q8CHI5
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q8CHI5
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 7 nucleus accumbens shell Predicted from orthologs Q8CHI5
CT 20 CT 0 DD1 1.71 PC12 cell Predicted from orthologs Q8CHI5
ZT 0 ZT 16 LD 7.5 prefrontal cortex Predicted from orthologs Q8CHI5
ZT 4 ZT 16 LD 3 SCN Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 15 SCN Predicted from orthologs Q8CHI5
ZT 4 ZT 20 LD 3 SCN Predicted from orthologs Q8CHI5
ZT 8 ZT 0 LD 4.76 uteri Predicted from orthologs Q8CHI5
ZT 8 ZT 20 LD 7 ventral tegmental area Predicted from orthologs Q8CHI5
Descriptionperiod circadian clock 1 [Source:HGNC Symbol;Acc:HGNC:8845](View all)
Protein Sequence
(Fasta)		 MSGPLEGADG GGDPRPGESF CPGGAPSPGP PQHRPCPGAS LADDTDANSN GSSGNESNGP 60
ESRGASQRSS HSSSSGNGKD SALLDTTESS KSTNSQSPSP PSSSIAYSLL SASSEDNPST 120
SGCSSEQSAR ARTQKELMTA LRELKLRLPP ERRGKGRSGT LATLQYALAC VKQVQANQEY 180
YQQWSLEEGE PCAMDMSTYT LEELEHITSE YTLRNQDTFS VAVSFLTGRI VYISEQAGIL 240
LRCKQDVFRG ARFSELLAPQ DVGVFYGSTA PSRLPTWGTG ASAGSGLKDF TQEKSVFCRI 300
RGGPDRDPGP RYQPFRLTPY VTKIRVSDGA PAQPCCLLIA ERIHSGNEAP RIPPDKRIFT 360
TRHTPSCLFQ DVDERAAPLL GYLPQDLLGA PVLLFLHPED RPLMLAIHKK ILQLAGQPFD 420
HSPIRFCARN GEYVTMDTSW AGFVHPWSRK VAFVLGRHKV RTAPLNEDVF TPPVPSPALS 480
LDPDIQELSE QIHRLLLQPV HSPSPTGFCG VGQVTSPGPL LSPGSSSASN GGDAEGPGPP 540
APVTFQQICK DVHLVKHQGQ QLFIESRARP LPRPRVPAAG TFKAKTLPCQ SADPELEVAP 600
ALTQAPLASA PEEAERKEAS SCSYQQINCL DSILRYLESC NLPSTTKRKC TSSSSCTASS 660
ASDEDRQRAG AVSVGTEKDP SAVLSGEGAA PLKEPVVGGG ALSPLALASK AESVVSVTSQ 720
CSFSSTIVHV GDKKPPESDI IMMEDLPGLP LGPAPSPAPS PTVAPDPAAG AYRPVGLTKA 780
VLSLHTQKEE QAFLSRFRDH GRLRGLDGSS TAPSGPGELX XXXXXXXXXX XXXXXXXXXX 840
XXXXXXXXXX XXXXXXXXXX XXXXXPWPPP ATPPFPAVVQ PCPLPAFSPR GGPQPLPPAP 900
TSVSPAAFPA PLVTPVVALV LPNYLFPAPP TYPCGAPQAP ASHSPSPSLP LPPPSPPRRP 960
DSLLFNSRCS SPLQLNLLQL EEPPRVEGSS AGHPPPSEET ADPAARPVEI TESSNQDALS 1020
GSSDLLELLL QEDSRSGTGS AASGSLGSGL GSGSGSGSHE GSSTSASITR SSQSSHTSKY 1080
FGSVDSSEAE AGAARARAEP GDQVIKYVLQ DPIWLLMANA DQHVMMTYQV PSRDMASVLK 1140
QDRERLRAMQ KQQPRFSEDQ RRELGAVHSW VRKGQLPRAL DVMACVDCGS STQDPGHPDD 1200
PLFSEMDGLG LEP 1213
Nucleotide Sequence
(Fasta)		 ATGAGCGGCC CCCTCGAAGG GGCTGATGGG GGAGGGGACC CCAGGCCGGG GGAATCCTTT 60
TGTCCTGGAG GGGCTCCATC CCCTGGGCCT CCACAGCATC GACCTTGTCC TGGCGCCAGC 120
CTGGCTGACG ACACGGATGC CAACAGCAAT GGCTCCAGCG GCAATGAGTC CAATGGACCA 180
GAGTCCAGGG GTGCATCTCA GCGGAGCTCA CATAGCTCCT CCTCCGGCAA TGGCAAGGAC 240
TCGGCCCTGC TGGACACCAC TGAAAGCAGC AAGAGCACAA ACTCTCAGAG CCCATCCCCA 300
CCCAGCAGTT CCATTGCCTA CAGCCTCCTG AGTGCCAGCT CAGAGGACAA CCCGTCTACC 360
AGTGGCTGCA GCAGTGAACA GTCAGCTCGG GCAAGGACCC AGAAAGAACT TATGACGGCG 420
CTGCGGGAGC TCAAGCTTCG GCTGCCACCA GAGCGCAGGG GCAAGGGCCG CTCTGGGACC 480
CTGGCCACGC TGCAGTACGC ACTGGCCTGT GTCAAGCAGG TGCAAGCCAA CCAGGAATAC 540
TACCAGCAGT GGAGCCTGGA GGAGGGCGAG CCTTGTGCCA TGGACATGTC CACCTACACT 600
CTGGAGGAAT TGGAGCACAT CACATCTGAG TACACGCTTC GCAACCAGGA TACTTTCTCC 660
GTGGCTGTCT CCTTCCTGAC AGGCCGCATC GTCTACATTT CTGAGCAGGC AGGTATCCTG 720
CTGCGCTGCA AGCAGGATGT GTTCCGCGGT GCCCGCTTCT CAGAGCTCCT GGCTCCCCAG 780
GATGTGGGCG TCTTCTATGG TTCCACTGCC CCATCTCGCC TGCCCACCTG GGGCACGGGG 840
GCCTCGGCAG GTTCAGGCCT CAAGGACTTC ACCCAGGAGA AGTCTGTCTT CTGCCGTATC 900
AGAGGGGGTC CTGACCGAGA TCCCGGGCCT CGGTACCAGC CATTCCGCCT AACCCCATAT 960
GTGACCAAGA TCCGGGTCTC TGATGGGGCC CCTGCACAGC CGTGCTGCCT GCTGATCGCA 1020
GAGCGCATTC ACTCTGGTAA TGAAGCTCCC CGGATTCCCC CCGACAAGAG GATCTTCACT 1080
ACGAGGCACA CGCCCAGCTG CCTCTTCCAG GATGTGGATG AAAGGGCCGC CCCGTTGCTG 1140
GGCTACCTCC CCCAGGACCT CCTGGGGGCC CCAGTGCTCC TTTTCCTGCA TCCCGAGGAC 1200
CGACCCCTCA TGCTGGCCAT CCACAAAAAG ATCCTGCAGC TGGCTGGCCA GCCCTTTGAC 1260
CACTCCCCTA TCCGCTTCTG CGCCCGGAAT GGGGAGTACG TCACCATGGA CACCAGCTGG 1320
GCTGGCTTCG TGCACCCCTG GAGCCGCAAG GTGGCCTTTG TGTTGGGCCG CCACAAAGTA 1380
CGCACGGCGC CCCTGAATGA AGACGTGTTC ACTCCCCCAG TCCCCAGTCC CGCTCTCTCC 1440
CTGGACCCTG ATATCCAGGA GCTCTCTGAG CAGATCCACC GGCTGCTGTT ACAGCCTGTG 1500
CACAGCCCCA GCCCTACCGG GTTCTGTGGA GTCGGCCAGG TGACTTCCCC AGGCCCTCTC 1560
CTCAGCCCTG GCTCCTCCAG TGCCAGCAAC GGGGGTGACG CCGAGGGACC TGGGCCTCCT 1620
GCACCGGTGA CCTTCCAGCA GATCTGTAAG GACGTGCACC TGGTGAAGCA TCAGGGGCAG 1680
CAGCTTTTTA TTGAGTCCCG GGCCCGGCCT CTGCCCCGGC CCCGTGTCCC TGCTGCAGGC 1740
ACATTCAAGG CCAAGACCCT TCCCTGCCAA TCTGCAGACC CAGAGCTGGA GGTGGCACCT 1800
GCTCTGACCC AGGCCCCACT AGCCTCGGCT CCTGAGGAGG CTGAGCGGAA AGAAGCCTCC 1860
AGTTGCTCCT ACCAGCAGAT CAACTGCCTG GACAGCATCC TCAGGTACCT GGAGAGCTGC 1920
AACCTCCCCA GCACGACCAA GCGCAAGTGC ACCTCCTCCT CGTCCTGCAC CGCCTCTTCG 1980
GCCTCCGACG AGGACAGGCA GCGGGCAGGA GCGGTCTCTG TGGGGACCGA GAAAGATCCA 2040
TCGGCAGTGC TGTCTGGGGA GGGGGCCGCC CCTCTGAAGG AGCCGGTGGT GGGAGGAGGC 2100
GCCCTGAGCC CGCTCGCCCT GGCCAGTAAG GCGGAGAGCG TGGTGTCCGT CACCAGTCAG 2160
TGTAGCTTCA GCTCCACCAT CGTCCATGTG GGAGACAAGA AGCCCCCGGA ATCGGACATC 2220
ATCATGATGG AGGACCTGCC TGGCTTGCCT CTTGGCCCAG CTCCCAGCCC AGCCCCCAGC 2280
CCCACGGTGG CCCCTGACCC AGCCGCAGGT GCCTACCGGC CAGTGGGCCT GACCAAGGCT 2340
GTGCTGTCCC TGCACACCCA GAAGGAGGAG CAGGCCTTCC TCAGCCGTTT CCGCGACCAT 2400
GGCAGGCTGC GTGGACTTGA CGGCTCCTCC ACGGCCCCCT CGGGCCCCGG TGAGTTGGNN 2460
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2520
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2580
NNNNNNNNNN NNNNCCCCTG GCCCCCACCA GCCACGCCGC CCTTCCCGGC TGTGGTCCAG 2640
CCCTGCCCCC TCCCCGCGTT CTCCCCCAGA GGAGGCCCCC AGCCTCTCCC TCCTGCACCC 2700
ACATCTGTGT CTCCTGCAGC TTTCCCTGCC CCACTGGTGA CCCCAGTGGT GGCCTTGGTG 2760
CTCCCTAACT ATCTCTTCCC TGCCCCACCC ACCTACCCCT GTGGGGCACC CCAGGCCCCC 2820
GCTTCCCACT CCCCTTCTCC GTCCCTGCCC CTGCCGCCCC CCAGCCCTCC CCGCCGCCCC 2880
GACTCTCTGC TCTTCAACTC GAGATGCAGC TCCCCGCTCC AGCTAAACCT GCTGCAGCTT 2940
GAGGAGCCCC CCCGTGTCGA GGGGAGTAGT GCTGGGCACC CCCCTCCCAG CGAGGAGACT 3000
GCCGACCCAG CGGCCAGACC GGTGGAGATA ACTGAGTCCT CCAACCAGGA CGCGCTCTCG 3060
GGCTCCAGCG ACCTGCTGGA GTTGTTGCTG CAGGAGGACT CGCGCTCTGG CACGGGCTCT 3120
GCTGCCTCGG GCTCCTTGGG CTCTGGCTTG GGCTCTGGGT CTGGCTCAGG CTCCCATGAG 3180
GGGAGCAGCA CCTCAGCCAG CATCACGCGC AGCAGTCAGA GCAGCCACAC GAGCAAGTAC 3240
TTCGGCAGCG TCGATTCTTC CGAGGCTGAG GCTGGGGCTG CCCGTGCCAG GGCTGAGCCC 3300
GGGGACCAGG TCATTAAGTA CGTGCTCCAG GATCCCATCT GGCTGCTCAT GGCCAATGCT 3360
GACCAGCATG TCATGATGAC CTATCAGGTG CCCTCCAGGG ACATGGCCTC TGTGCTGAAG 3420
CAGGACCGGG AGCGGCTCCG GGCTATGCAG AAGCAGCAGC CTCGGTTCTC AGAGGACCAG 3480
CGGAGGGAAC TGGGTGCTGT GCACTCCTGG GTCCGGAAGG GTCAACTGCC TCGGGCCCTT 3540
GATGTGATGG CCTGTGTGGA TTGCGGTAGC AGCACCCAAG ACCCTGGCCA CCCTGATGAC 3600
CCACTCTTCT CGGAAATGGA TGGACTGGGG CTGGAGCCC 3639
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-CaE-021686Caenorhabditis elegans28 6.90e-15 80.49
CGD-EqC-020994Equus caballus74.3 0.00e+00 1167.5
CGD-GaM-021007Gadus morhua54.04 0.00e+00 634.4
CGD-HoS-021038Homo sapiens (Human)75.73 0.00e+00 1203.3
CGD-OvA-022197Ovis aries75.43 0.00e+00 1201
CGD-RaN-021793Rattus norvegicus74.97 0.00e+00 1179.9
Gene Ontology

GO:0005515--protein binding
GO:0097167--circadian regulation of translation
GO:0043153--entrainment of circadian clock by photoperiod
GO:0009416--response to light stimulus
GO:2000323--negative regulation of glucocorticoid receptor signaling pathway
GO:0042752--regulation of circadian rhythm
GO:0002028--regulation of sodium ion transport
GO:0031490--chromatin DNA binding
GO:0000976--transcription regulatory region sequence-specific DNA binding
GO:0032922--circadian regulation of gene expression
GO:0051591--response to cAMP
GO:0007623--circadian rhythm
GO:0019900--kinase binding
GO:0070932--histone H3 deacetylation
GO:0010608--posttranscriptional regulation of gene expression
GO:0043966--histone H3 acetylation
GO:0000989--transcription factor activity, transcription factor binding
GO:0000122--negative regulation of transcription from RNA polymerase II promoter
GO:0045892--negative regulation of transcription, DNA-templated
GO:0008134--transcription factor binding
GO:0045944--positive regulation of transcription from RNA polymerase II promoter
GO:0005634--nucleus
GO:0070888--E-box binding
GO:0042634--regulation of hair cycle
GO:0043967--histone H4 acetylation
GO:0031625--ubiquitin protein ligase binding
GO:0000978--RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0005737--cytoplasm