CGDB Gene Information
| Tag | Content | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| CGDB ID | CGD-OrN-042393 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Ensembl Accession | ENSONIP00000011630.1 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Name | per1a | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Ensembl Information | ENSONIG00000009248; ENSONIT00000011639 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Organism | Oreochromis niloticus | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| NCBI Taxa ID | 8128 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Circadian Information |
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| Description | period circadian clock 1a [Source:ZFIN;Acc:ZDB-GENE-011220-1](View all) | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Sequence (Fasta) |
MSYDNSKSMP SSSNRGRLAW ADGKDPESDS QGLNVHEIGS SGQPGANVTH KDQGSGEGGG 60 SSPSDGSRSG GSSGDQRCPT SDDMDGISSG NDSGERESEG GMERVNRSHR HQFTRSPHSS 120 SNGKDSGMML ETTESNKSSN SQSLSPPSGS LVYSLPSSSS EHDPPSTSGC SSHQSARVQT 180 QKELMKAIKE LKLRLPAERK AKDHSSTLNA LKYALQCVKQ VRANKEYYHQ WSVEECHGCS 240 LDLSTFTIEE LDNITSEYTL KNTDTFSMAV SFLSGKVVYI SPQGSSLLRC KPECLQGTMF 300 SDLLAPQDVS TFFSSTAPCR LPSWASCIGS ASPPVDCTQE KSMFCRLSAD RPQGGEMHYY 360 PFRLTPYQLT IRDSDAAEPQ PCCLLIAERV HSGYEAPRIP ADKRIFTTSH TPSCLFQEVD 420 ERAVPLLGYL PQDLVGTPIL LCIHPDDRPI MVAIHEKIFQ FAGQAIDYSP LRMCARSGEY 480 VTMDTSWSSF VNPWSRKVAF IVGRHKVRTS PLNEDVFTMP QDCENRVTTP DIVQLSEQIH 540 RVLVQPVHSS SSQGYSSLGS SGSRGSHHSN QQRLCASAAS SSDSNSPVVE EAAGPFHKPM 600 TFQQICKDVH MVKTNGQQVF IESRNRPLPR KNTSTDTVAV RAINSDPVRS LIADMTNPSK 660 SLVPASLVPK EPSTSYSYQQ INCLDSIIRY LESCNIPNTV KRKCGSSSCT ASSASDDDKH 720 EPNRNSKGGS VNLVGEPPPL PPLTMATKAE SVASVTSQCS FSSTIVHVGD KKPPESDIVM 780 EEAPTTPTLA APFAAQTPLD MTPTSPASSL ALPANAAITP PPPPPPLPQA SQPDRDSRRS 840 GSVGGGAAGG GGSRLGLTKE VLSAHTQQEE QAFLDRFKDL SKLRVVDQTM SSTVHCHAAA 900 GNPLSRGVRC SRDYPAAGGS CGHKRGRGGK RLKHQESSDQ HSSLGMSGGR QDPRSTSAPM 960 PLNMPLGPPT TSSSWPSVGS QASMPPAAFA PGMFPMYPVY PPLTQPLPIP DLSRLPPGQM 1020 VPPMMAFVLP NYMFPQMGMP MCQPGSIPGP FYNPNYVYPG APAAAVPNNV SNPMPTLGTC 1080 VPSRSSTPQS YTQTPADREG AESPLFQSRC SSPLNLLQLE ESPSNRLEVA TALAASQQAS 1140 PSVQGGAARG QSSTNQRSSD DTSKENENAE ANESNNDAMS TSSDLLDLLL QEDSRSGTGS 1200 AASGSGFSGT RSSGSGSGSN GCSSFGTGGT ISSQGSHTSK YFGSIDSSEN DHSRKQPAGG 1260 SSSPGGDGGE EQFIKCVLQD PIWLLMANTD DKVMMTYQLP VRDLETVLRE DRESLRNMQK 1320 HQPRFTEEQK RELSQVHPWI RTGRLARAIN ISGCIGCKSP PPVPPAPPFD VEIHDMELCS 1380 VLKAEEETAN ETMKNLAEVT HPEEEEEEEG VEDKGTEKQD SGQDMTAKEE GVGSDTVAGK 1440 SET 1443 |
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| Nucleotide Sequence (Fasta) |
GTTACCAGAC CATGTACGTG CACGTGTGTC CCTGCGTGTA AACTACAGTT GGGGGAAGAA 60 TAAAAAAAAA ATGTATTTAG ATCCAGCACA GACCGCTAAG TGAAGGTTGT CGTTGCTACC 120 TGGATTTATG CCGTCTCTTT CAAGACTTTT GAGTTCCCCA CCTTGGGATA TTGAAGCAGT 180 TGCGTTATTG TTATTTTGAA GCATATTTAA GGTTGCCTTC AGCGCCTAGA GCACCACATC 240 TCTAAAGAAG CGAGAAAACC AGACGCAGAG TGAAACGAAT GTTTTTTGCT CTCACCGAGA 300 GCAGATTTTC TCACTCTCGC TCACAATCTC TCATCCCATC TGTTGGAGCA CTTATGCCAA 360 GGCTGTTTCA TAACCACAAA TTCATGTCTT GTCTGCAGCA CTTTAAGTGA CACTGTTATT 420 TTTCCCGGAT AATTACTGTT CTGTTTATTC AGAAAGGGTG CTTTGTAGCA GTCTGCACTT 480 TTTTTTTTCT TCCTGAAAAT TCTCAAAGAG GGGTCTACAG CCCCCCCCCC CCCCCCAAAA 540 ACAAACTCAA AAGAAAGAAT GGTATCGTCT CTGTTTGATT TGTTAAACTA ACAGCCAACA 600 ACTATGATTC ACATGTGCGC AAATAGCAAT CCCACTTAAA TCAAAGTTCA AGGTTTTGTT 660 TTTTTTCGCC TTGACTGACC CCCTCAATCA AGCTGTACCA GCCTCATCCT ACACTAGTAT 720 GAGTTATGAC AACTCTAAAT CAATGCCTAG CAGCAGCAAT CGGGGGCGAT TGGCATGGGC 780 CGACGGAAAA GACCCGGAAT CGGATTCACA GGGGCTAAAT GTGCACGAAA TCGGGAGCAG 840 TGGTCAGCCT GGTGCCAATG TCACCCACAA GGACCAGGGG AGCGGAGAGG GAGGAGGTTC 900 ATCCCCCAGC GATGGATCTC GGTCTGGAGG TTCGTCTGGA GATCAGAGGT GTCCGACTTC 960 AGACGATATG GATGGAATCT CGAGCGGGAA TGACTCTGGG GAGAGGGAGA GTGAGGGCGG 1020 GATGGAGCGG GTGAACAGGT CTCATAGACA TCAGTTCACA CGCAGCCCCC ACAGCTCTTC 1080 AAATGGCAAA GACTCTGGCA TGATGCTGGA GACTACAGAG AGCAACAAGA GCTCCAACTC 1140 TCAGAGCCTT TCACCTCCCA GCGGCTCCCT GGTCTATAGC CTGCCATCGT CCAGCTCGGA 1200 GCACGACCCC CCCTCCACTT CCGGATGCAG CAGTCACCAG TCAGCCAGGG TCCAGACGCA 1260 GAAGGAGCTC ATGAAGGCCA TCAAAGAGCT CAAGCTCCGA CTCCCAGCTG AGCGCAAGGC 1320 CAAGGACCAC TCCAGCACTC TAAACGCACT CAAATACGCT CTGCAGTGTG TCAAACAAGT 1380 CCGAGCCAAC AAGGAGTACT ATCACCAGTG GAGTGTGGAG GAGTGTCACG GCTGCAGTCT 1440 GGACTTGTCC ACCTTCACGA TTGAGGAGCT GGATAATATC ACCTCAGAGT ACACCCTCAA 1500 AAACACTGAC ACGTTCTCCA TGGCAGTATC ATTCTTGTCA GGGAAGGTTG TGTACATATC 1560 GCCCCAGGGC TCATCCTTGC TGCGTTGTAA GCCCGAGTGT CTCCAAGGAA CCATGTTCTC 1620 TGACCTTTTG GCTCCGCAAG ACGTCAGCAC CTTCTTCAGC AGCACGGCAC CCTGCCGCCT 1680 CCCCTCCTGG GCCTCCTGCA TCGGCTCTGC TTCTCCTCCA GTCGACTGCA CCCAGGAGAA 1740 GTCCATGTTC TGTCGGCTTA GCGCTGACCG GCCGCAGGGC GGCGAGATGC ACTATTACCC 1800 ATTTCGCCTC ACGCCTTACC AGCTCACCAT CAGAGACTCG GATGCTGCTG AGCCACAGCC 1860 CTGCTGCCTG CTGATCGCAG AGAGGGTCCA CTCTGGATAT GAAGCTCCTC GCATCCCAGC 1920 CGACAAGAGG ATCTTCACCA CCAGTCACAC TCCCAGCTGC CTCTTCCAGG AAGTTGATGA 1980 AAGGGCAGTG CCACTGTTGG GTTACCTCCC TCAGGACTTG GTCGGGACAC CCATCCTGCT 2040 CTGCATCCAC CCTGATGACA GGCCCATTAT GGTGGCTATA CATGAGAAGA TCTTTCAGTT 2100 TGCTGGGCAG GCGATCGACT ACTCGCCCCT GCGGATGTGC GCCCGCAGCG GGGAGTACGT 2160 CACCATGGAC ACCAGCTGGT CTTCCTTTGT CAACCCTTGG AGTAGAAAGG TCGCGTTCAT 2220 CGTGGGGCGG CACAAAGTCA GAACGAGCCC GCTGAATGAA GACGTGTTCA CCATGCCGCA 2280 GGACTGCGAG AATCGGGTCA CCACGCCCGA CATCGTCCAG CTGAGCGAGC AGATCCACAG 2340 AGTCTTGGTG CAGCCAGTGC ACAGCAGCAG CTCTCAGGGC TACAGCTCTC TTGGGTCCAG 2400 CGGGTCACGA GGCTCCCACC ACTCCAACCA ACAGCGCCTC TGTGCCTCAG CCGCCTCGTC 2460 CAGCGACAGC AACAGTCCCG TTGTAGAAGA GGCTGCAGGC CCATTTCACA AACCTATGAC 2520 GTTTCAGCAG ATTTGCAAAG ACGTCCATAT GGTGAAAACA AACGGGCAGC AGGTTTTCAT 2580 CGAGTCTCGT AACCGCCCGC TGCCGAGGAA AAACACCAGC ACAGACACTG TGGCCGTCAG 2640 AGCGATCAAC AGTGACCCAG TCAGAAGTTT GATAGCAGAC ATGACAAACC CATCCAAAAG 2700 TTTGGTCCCT GCATCACTTG TACCCAAGGA GCCATCTACG AGCTACTCCT ACCAGCAGAT 2760 CAACTGTCTG GACAGCATCA TTAGGTACTT GGAGAGCTGC AACATTCCCA ATACAGTCAA 2820 AAGGAAGTGT GGTTCCTCCT CCTGCACTGC CTCCTCAGCG TCTGATGACG ACAAACATGA 2880 GCCCAACCGC AACAGCAAAG GTGGTTCAGT TAACCTCGTA GGTGAACCAC CTCCTCTGCC 2940 TCCTCTGACC ATGGCCACAA AGGCAGAAAG TGTAGCCTCA GTTACGTCTC AGTGTAGCTT 3000 CAGCAGCACC ATCGTCCATG TTGGAGACAA GAAGCCTCCC GAGTCAGACA TTGTCATGGA 3060 GGAAGCTCCT ACAACTCCCA CGCTGGCTGC TCCCTTTGCT GCACAGACTC CTCTCGACAT 3120 GACCCCGACT TCTCCCGCAA GCAGCTTAGC GCTTCCCGCT AACGCAGCCA TCACGCCTCC 3180 TCCACCACCA CCTCCTCTCC CTCAAGCCAG CCAGCCTGAT AGGGACAGCC GGAGAAGTGG 3240 AAGTGTAGGA GGCGGAGCAG CAGGAGGTGG AGGTAGCAGA CTGGGTCTTA CCAAGGAGGT 3300 GCTGTCCGCC CATACTCAGC AGGAGGAGCA GGCCTTCCTC GACCGCTTCA AGGACCTCAG 3360 CAAGCTGCGC GTTGTCGATC AGACGATGTC TTCAACTGTG CACTGCCACG CTGCAGCTGG 3420 CAACCCCCTG TCACGAGGGG TGCGTTGTTC CCGTGACTAC CCAGCTGCAG GAGGTAGCTG 3480 TGGTCACAAA CGTGGTCGTG GCGGTAAGAG ACTCAAGCAC CAGGAGTCTT CTGACCAGCA 3540 CAGCTCTCTG GGCATGAGCG GGGGTCGTCA GGACCCCAGA AGCACGAGTG CTCCCATGCC 3600 CCTCAACATG CCTCTCGGCC CTCCCACAAC CTCATCCTCC TGGCCTTCTG TAGGCTCCCA 3660 GGCTAGCATG CCACCCGCTG CTTTTGCTCC TGGTATGTTT CCAATGTACC CAGTCTACCC 3720 ACCTCTTACG CAGCCCTTAC CCATCCCAGA TCTATCACGT TTACCCCCCG GCCAGATGGT 3780 ACCTCCTATG ATGGCCTTCG TTCTGCCCAA CTACATGTTC CCGCAGATGG GAATGCCCAT 3840 GTGTCAGCCA GGCTCCATCC CTGGACCCTT TTACAATCCC AACTACGTTT ACCCCGGGGC 3900 CCCTGCAGCC GCTGTCCCCA ATAATGTGTC CAACCCCATG CCTACGCTAG GCACATGTGT 3960 CCCGTCTCGC AGCAGCACAC CGCAATCTTA CACGCAGACG CCAGCTGATC GCGAAGGCGC 4020 GGAGTCACCG CTCTTCCAAT CCCGATGCTC CTCCCCTCTC AACTTGCTTC AGCTGGAGGA 4080 GTCGCCAAGC AACCGGTTAG AGGTCGCCAC GGCACTAGCA GCATCTCAGC AGGCATCACC 4140 TTCCGTGCAG GGCGGGGCAG CCAGGGGGCA AAGTTCCACA AATCAGAGGA GCTCAGATGA 4200 TACCTCCAAG GAAAATGAGA ATGCTGAAGC TAATGAGTCC AACAACGATG CCATGTCCAC 4260 CTCCAGCGAC CTGCTGGACT TGCTGCTCCA AGAAGACTCG CGCTCAGGCA CCGGCTCAGC 4320 TGCCTCTGGT TCAGGGTTTT CTGGAACAAG GTCCTCGGGT TCAGGCTCCG GCTCCAACGG 4380 CTGCAGCTCC TTTGGCACCG GTGGCACCAT CAGCAGCCAG GGCAGCCACA CCAGCAAGTA 4440 CTTCGGCAGC ATCGACTCGT CTGAGAACGA CCATTCCCGC AAACAGCCAG CAGGGGGCAG 4500 CAGCAGCCCG GGAGGAGACG GTGGAGAGGA GCAGTTCATC AAGTGTGTGC TGCAGGACCC 4560 CATCTGGCTG CTTATGGCCA ACACAGACGA CAAGGTCATG ATGACCTATC AGCTGCCTGT 4620 CAGGGACTTG GAGACGGTGC TGAGAGAGGA TCGTGAGTCC TTGAGGAACA TGCAGAAACA 4680 CCAGCCACGC TTCACAGAGG AGCAGAAGAG GGAGCTGAGC CAGGTCCATC CCTGGATCCG 4740 CACTGGACGC CTGGCACGAG CCATCAACAT CTCTGGCTGT ATTGGCTGCA AGTCTCCCCC 4800 CCCCGTGCCG CCCGCCCCCC CATTCGACGT GGAGATCCAC GACATGGAGC TGTGCAGCGT 4860 GCTCAAGGCT GAGGAGGAGA CCGCCAACGA GACGATGAAA AACCTCGCAG AGGTGACTCA 4920 CCCTGAGGAA GAAGAAGAGG AGGAAGGGGT TGAAGATAAA GGAACGGAAA AACAGGACAG 4980 CGGCCAAGAC ATGACGGCAA AGGAGGAGGG AGTGGGGTCA GACACTGTGG CAGGAAAAAG 5040 TGAGACTTAG CCACTGGAGT CTGACGGGAC TCACCTCCCA GGTGGCCCAA AGTGAAAAGC 5100 ACTAGCGCTC ATCATGAGTT TCATCATGAG ACAATATGCG CCATCCAGGA CTTCCTGTGC 5160 TCAAAGCATC ATTACTGAGG CTGTAATCCA ATGAGCTTGT GCTGGGATGC TGAGGTGCAT 5220 ACTGATGCAG ACAACTGCCG TTAATTGTCC GACAGCAGGT CAGGAAGGAC ACGTTGATTC 5280 TTTGAGTCTG ATTTCGATGT CAGCGGTCCA GGCACGCACT GTGACTGATA ATTAAATGCC 5340 TTGGAAACCA CCGGACACGC ACACTCAGTT TTAGAGAGTG AATTGGTCCT GTTTTCTTTC 5400 TTTTTGTCTA ATTTTTTATT GTCCTTGTAG TTCATGGTAT ATTTATTTAA GTTGTAAAAT 5460 AATCAGAGGA GACTAAGGTT AATGTTTTGC AAAGGAAAAA AAGTGCGCCT TTACATAAAG 5520 ATGGATGTGC TTCACTCATG TTTTCATCTG TCCTGTTCAG AGTTCAGCCT GTGAGGAAAG 5580 AAGGGACTCA GACTTTTCTG AATGTTTCTG GGATCCTGCT CTGGTTTCAA TCCTGACCTT 5640 TTCTTCTTTT TTTCTTCTTT TGTATGAATC GTGACCCCAA ATAAGTAAAC TACTTTCACC 5700 TGATAGATAA AATGTACAGT GAGAACCAAG TAATTTTGTA AGCATTGTGT ATATTTTTAT 5760 ACTTTGATGC ACTGCAGATG GAGAACACCC AAAAGAGGGT GTGTACTGTA AAAAAACAAA 5820 CAAAAAAATG TGTTTAAAAA GCTATTTGTT ATACGATAGA TCGCACTTTT TGGAAATGGA 5880 GACAGTGTTT GTGACTCGGC AATCGAGTTG CTTTACTTGT GGACGAGCTT GGGAGTCTGA 5940 CCCACACCTG TTAAAAGGCT TCTCATCAGC CAGGCATTAG TTTGAACAGT GAACAAACAC 6000 TACAGACGGC GTTTCCCAAA TTATCAACCC CCCTATGGAG CCTGCAGCAC TCCTGTGTTG 6060 GTGAGAAGAT TTGGAAAAAG GTGGATGTAA CTCTTAAAAA GTCATCTGAA GAGTTCAAAG 6120 AGTGTTTTAC TATCTTCTCT ATTCCACTCT GTCCCTTTTC TCTGTCTCTT CTCTGTGGCA 6180 CTATTCTGGT CATGTGATAT CCTCTGCTTC ATAACGTCAG TGGTGTCTGC GACAGTTTAA 6240 TATTTTTCAA GTTCTTTGTA CAAAAAAAGA CAATAAAAGA CTTAAAATGG GTTTAAATGC 6300 GAAGTCAGAT TTTTCTTCTT TTCCACCTCA TGATTACATC TCTTTGCAGT CTATTTTTGT 6360 TGCCAGTTGG CATGGATACA CAGAAGCGTC CAGAACGAGC TGGGAGCGGA TCGGGGCAGC 6420 TGCTTTCTTA CCCGACCGCA GTCTCCTGCT GTTCTGCTGT GGTTTCT 6467 |
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| Sequence Source | Ensembl | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Orthology |
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| Gene Ontology | GO:0005515--protein binding |
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