CGDB Gene Information
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| CGDB ID | CGD-LeO-065998 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Ensembl Accession | ENSLOCP00000016458.1 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Name | per1a | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Ensembl Information | ENSLOCG00000013344; ENSLOCT00000016488 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Organism | Lepisosteus oculatus | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| NCBI Taxa ID | 7918 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Circadian Information |
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| Description | period circadian clock 1a [Source:ZFIN;Acc:ZDB-GENE-011220-1](View all) | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Sequence (Fasta) |
MSDDNSDSAP SHADDVHGVG VSGEGAGPRA GSPGLSGGSE TNSRSNSSSP LGGGGGANSP 60 GGGPGGRGSR APRIQGKGPP QGPQGSSDDM DAHSNGNSSG NDSAVLENES QGRQSTRSSQ 120 SSSSHNCKDS GVLLETTESN KSSNSQSPSP PSSSIAYSLL SASSEQDHPS TSGCSSDQSA 180 RVKTQKELMT ALKELKIRVP AERRGKGRSS TLAALQYALT CVKQVRANQE YYHQWTVDEG 240 QNCSLDLSNY TIEELENITS EYTLKNTDTF SVAVSFITGK VVYVSPQAAC ILRCKPERLQ 300 GALFSKLLAP QDVSVFYSNT VPCRLPAWSA CNGTATSPLD CTQEKSMFCR LSGGREREGE 360 LRYYPFRLTP YQLTLRDSDQ AEPQPCCLLI AERVHSGYEA PRIPPDKRIF TTSHTPSCLF 420 QEVDERAVPL LGYLPQDLVG TPVLLYLHPE DRPAMVAVHK KILQLAGQPL DHSAMRVCAR 480 SGEYLTIDTS WSSFINPWSR KVAFIIGRHK VRTSPLNEDV FTPPLNGEVR SLVPEIHELS 540 SRIHRLLLQP VHATGSLGYC SVGSNGSHEH YLSIASSSDS NGAPADETLL HKPMTFQQIC 600 KDVHMVKNHG QQVFIESRSK PLPQKHASAG PVLPTASSAA VRPAGEVAKE AASAQRSSAP 660 EEAVKKDSPS PYSYQQINCL DSIIRYLESC NIPNTVKRKC GSSSCTASST SDDDKQKPGE 720 EASDMNKGTF ILTVQGPAHP LTPLALHSKA ESVVSITSQC SFSSTIVHVG DKKPPESDIV 780 MMEEAPPTPA PPPPLTTPVA PPPDKDPKDP WRRVGLTKEV LSVHTQKEEQ AFLNRFRDLS 840 QLRVFEPPTQ AERRHSGVPH TRGVRSSRDY PAGGSSGRRG TGRGSRSKAK RLKHQEPSEH 900 GSSVGIGGVF PASSRATTTL SPPHLPLGPP TSSSSWPTSI GSQASLPPLP YHPGVLPAYP 960 ISVYPPTPRP PQGPPDPQSL PPGFPVTPMV AFVLPNYMFP QLNAPVLPQP FFNPTSIFPF 1020 PAASAPTALL PQNLGPPPQL QATTPSQEPL RAPSRSSTPQ SSSPPLPDRE GSQTPLFQSR 1080 CSSPLNLLQL EESSSNRQEV TSLAVAAAQA QQTTPTGGVA TQEWAEPQGG SGGLASPTQL 1140 STSGDRKDNE NVEAIESSNQ DAMSTSSDLL DLLLQEDSRS GTGSAASGSG SSGSGSHGCS 1200 TSGSGTRSSQ SSHTSKYFGS VDSSENDLAG KKQAGLAAES EQFIKYVLQD PIWLLMANTD 1260 EKVMMTYQLA TRDPETVLRE DREALRAMQK QQPRFSEEQK RELSEVHPWI RTGRLPRAIN 1320 IPACVGCGSS PPCPGLAPPF DVELHEMELG GVPGSPEDPA SKTLSAPETA MEEEAGPAPA 1380 PHANDQEMAS EEQEVTSQGA KKKDHSEH 1408 |
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| Nucleotide Sequence (Fasta) |
GAGGATTCCC TCAGTCGGGA ATCTTGTAGG TCCCCCCTCT GGAGAAAGAT CGGATCTACT 60 CAGAACAAAT TCCAGAATTA GGGGAACAAA GACCTTGAAA AAGGAAGATA AAGAGGCCTG 120 AAAAAAGAGA GGATCCATAT TTTGATCAAT TCCTCTGCCC ATTCTGCAGA GTTCTGCACC 180 CTCCAGCTCT CTGTCTCTTT CTCACTCCAT CTGGCATTGC GATCCGCTGC CAGATTGAAG 240 GTTTTCAGTT TCCCGGAGAC AGCCGAGTTT TTGTTGCTCT AGTGTCAAGT TTCGCAAGTA 300 TTTTAAGTTT CTCCAGATCC ATTTTCATAT TTATCAATTT AAAATTCAAA CTCTGCAATG 360 GTTCACTCCG GTGGACAAGA CTGCCCCACC TAGTGTGGAA GCAGAGGTAC TGCCACCCTT 420 TGATTTATTC ATCGCTATTC TTAGTATTAT TATGAGTGAT GACAATTCTG ACTCCGCCCC 480 CAGCCATGCT GATGATGTGC ACGGGGTGGG TGTGTCCGGG GAGGGGGCGG GGCCCAGGGC 540 GGGCTCTCCT GGCTTGAGTG GCGGCTCAGA GACCAACAGC CGGAGCAACA GCAGCAGCCC 600 ACTTGGAGGT GGGGGAGGAG CCAACAGCCC TGGGGGCGGT CCCGGGGGGC GGGGCTCAAG 660 AGCCCCTAGG ATCCAGGGAA AAGGGCCCCC GCAGGGCCCC CAGGGCTCCT CAGATGATAT 720 GGACGCCCAC AGCAATGGGA ACTCCAGTGG GAACGACTCT GCTGTGCTGG AGAATGAGTC 780 GCAGGGGAGG CAATCCACCA GGAGCTCTCA GAGTAGCTCC AGCCACAACT GCAAGGACTC 840 TGGCGTGTTA CTGGAGACCA CAGAGAGCAA TAAGAGCTCA AACTCCCAGA GCCCCTCGCC 900 TCCCAGCAGC TCCATCGCGT ACAGCCTGCT GAGCGCCAGC TCCGAGCAGG ACCACCCCTC 960 CACCAGTGGC TGCAGCTCGG ACCAGTCCGC GCGGGTGAAG ACCCAGAAGG AGCTGATGAC 1020 GGCCCTGAAG GAGCTGAAGA TCCGCGTGCC GGCGGAGCGG CGGGGGAAGG GGCGCTCCAG 1080 CACGCTGGCC GCGCTGCAGT ACGCCCTCAC CTGCGTCAAG CAAGTCCGAG CCAACCAGGA 1140 GTACTACCAC CAGTGGACAG TGGACGAGGG TCAGAACTGC AGCCTGGACC TGTCAAACTA 1200 CACCATCGAG GAGCTGGAGA ACATCACCTC CGAGTACACC CTCAAGAACA CTGACACATT 1260 CTCGGTGGCC GTGTCCTTCA TCACGGGGAA GGTGGTGTAT GTCTCCCCCC AGGCGGCCTG 1320 TATCCTGCGC TGCAAACCTG AGCGCCTGCA GGGGGCGCTT TTCTCCAAGC TGCTGGCCCC 1380 CCAGGATGTC AGCGTGTTCT ACAGCAACAC CGTGCCCTGC CGCCTGCCCG CCTGGTCTGC 1440 CTGTAATGGC ACAGCTACCT CACCCCTGGA TTGCACCCAG GAGAAATCCA TGTTCTGTCG 1500 TCTCAGTGGG GGCCGGGAGA GGGAGGGAGA GCTGCGGTAC TACCCCTTCC GACTGACGCC 1560 CTACCAGCTG ACCCTGCGCG ACAGCGACCA AGCCGAGCCC CAGCCCTGCT GCCTGCTCAT 1620 CGCAGAGCGG GTCCATTCTG GATACGAGGC TCCCCGCATT CCCCCAGACA AGCGAATCTT 1680 CACCACGAGC CACACCCCCA GCTGTCTCTT TCAGGAGGTG GATGAGCGTG CAGTGCCATT 1740 GTTGGGGTAC CTTCCTCAGG ACCTAGTGGG GACCCCAGTT CTGCTGTACC TGCACCCCGA 1800 GGATCGGCCA GCCATGGTGG CTGTTCATAA GAAGATCCTG CAGTTGGCCG GCCAGCCCCT 1860 GGACCACTCC GCCATGCGGG TGTGTGCGCG CAGCGGGGAG TACCTGACCA TCGACACCAG 1920 CTGGTCCAGC TTCATCAACC CCTGGAGCCG CAAGGTGGCC TTCATCATCG GCCGGCACAA 1980 AGTCCGCACG AGCCCCCTGA ACGAGGACGT GTTCACACCG CCCCTCAACG GGGAGGTGCG 2040 GTCGCTGGTC CCCGAGATCC ACGAGCTGAG CAGCCGGATC CACCGGCTCC TCCTGCAGCC 2100 TGTGCACGCC ACCGGCTCTC TGGGCTACTG CAGTGTGGGC AGTAACGGCT CCCATGAGCA 2160 CTACCTCAGC ATCGCCTCGT CCAGCGACAG CAACGGGGCG CCCGCCGACG AGACACTGCT 2220 GCACAAGCCG ATGACGTTCC AGCAGATCTG TAAGGACGTG CACATGGTGA AGAACCACGG 2280 CCAGCAGGTC TTCATCGAGT CGCGCAGTAA ACCGCTGCCC CAGAAACACG CCAGCGCAGG 2340 TCCGGTGCTG CCGACGGCTA GCAGCGCGGC AGTGAGGCCA GCTGGGGAGG TGGCCAAGGA 2400 GGCAGCCTCT GCCCAGCGTT CCTCGGCTCC AGAGGAGGCA GTGAAGAAGG ATTCGCCGTC 2460 CCCGTACTCC TACCAGCAGA TCAACTGTCT GGACAGTATT ATCCGGTACC TGGAGAGCTG 2520 CAACATTCCC AACACAGTGA AGAGGAAGTG TGGCTCCTCC TCCTGCACCG CATCATCCAC 2580 CTCCGACGAC GACAAGCAGA AGCCTGGAGA GGAGGCCTCA GACATGAATA AAGGTACCTT 2640 TATCCTTACA GTACAGGGGC CCGCTCACCC CCTCACGCCC CTGGCGCTGC ACAGCAAGGC 2700 AGAGAGCGTG GTCTCCATCA CCAGCCAGTG CAGCTTCAGC AGCACCATTG TCCACGTGGG 2760 CGACAAGAAA CCCCCCGAGT CAGACATTGT GATGATGGAA GAGGCCCCTC CCACCCCAGC 2820 CCCGCCCCCT CCCTTGACCA CGCCCGTGGC CCCGCCCCCG GATAAGGACC CGAAGGACCC 2880 CTGGCGGCGG GTGGGGCTGA CCAAGGAGGT CCTGTCTGTG CACACGCAGA AGGAGGAGCA 2940 GGCGTTCCTC AACCGGTTCC GCGACCTCAG CCAGCTGCGG GTCTTCGAGC CACCAACCCA 3000 AGCCGAGCGC CGGCACAGCG GGGTGCCCCA CACGCGAGGG GTGCGCAGTT CCAGGGACTA 3060 CCCAGCAGGG GGCAGCAGTG GGCGGCGGGG CACCGGACGG GGGAGCAGGT CGAAGGCCAA 3120 GAGACTGAAG CACCAGGAGC CGTCCGAGCA CGGCAGCTCT GTCGGGATCG GGGGGGTCTT 3180 CCCAGCATCC AGCAGGGCCA CGACCACCCT GTCCCCCCCG CACCTGCCTC TGGGACCCCC 3240 GACTTCGTCC TCGTCCTGGC CCACTTCCAT CGGCTCCCAG GCCAGCCTGC CCCCCCTTCC 3300 CTACCACCCT GGCGTCCTGC CTGCCTACCC CATCTCGGTC TACCCGCCCA CTCCCAGGCC 3360 CCCACAAGGC CCCCCTGACC CCCAAAGCCT TCCCCCTGGC TTTCCCGTCA CCCCCATGGT 3420 GGCATTTGTG CTGCCCAACT ACATGTTCCC CCAGCTCAAC GCCCCGGTCC TCCCTCAGCC 3480 CTTCTTCAAC CCCACCTCCA TCTTCCCCTT CCCAGCTGCC TCCGCCCCCA CAGCCCTCCT 3540 GCCCCAGAAC CTGGGGCCGC CCCCCCAGCT GCAGGCCACC ACCCCCTCAC AGGAACCCCT 3600 GCGGGCCCCC TCTCGCTCCA GCACCCCGCA GTCCTCCAGC CCCCCCCTCC CCGACCGCGA 3660 GGGCTCCCAG ACACCCCTCT TCCAGTCCCG TTGCTCCTCC CCACTCAACT TACTTCAGCT 3720 AGAAGAGTCT TCCAGTAACC GACAGGAAGT GACTTCGTTG GCCGTGGCCG CCGCCCAGGC 3780 CCAGCAGACC ACACCCACAG GGGGAGTGGC TACACAGGAG TGGGCGGAGC CGCAGGGAGG 3840 GAGTGGAGGT TTGGCCTCAC CCACTCAGCT CAGCACATCG GGGGACAGAA AAGACAATGA 3900 AAACGTTGAG GCCATTGAGT CATCTAATCA GGATGCCATG TCAACTTCCA GTGACCTGCT 3960 GGATCTGCTT CTGCAGGAGG ATTCCCGATC AGGCACTGGC TCGGCCGCCT CTGGCTCAGG 4020 GTCCTCGGGC TCTGGGTCCC ACGGCTGCAG CACATCAGGC AGTGGGACCA GAAGCAGTCA 4080 GAGCAGCCAC ACCAGCAAGT ACTTCGGCAG CGTGGACTCC TCGGAGAACG ACCTGGCGGG 4140 CAAGAAGCAG GCGGGGCTGG CGGCGGAGAG CGAGCAGTTC ATCAAGTACG TCCTGCAGGA 4200 CCCCATCTGG TTGCTGATGG CCAACACCGA CGAGAAGGTC ATGATGACCT ACCAGCTGGC 4260 CACCCGGGAC CCGGAGACCG TGCTGCGGGA GGACCGGGAG GCCCTGCGCG CCATGCAGAA 4320 GCAACAGCCG CGCTTCAGCG AGGAGCAGAA GAGGGAGCTG AGCGAGGTGC ACCCTTGGAT 4380 CAGGACCGGC CGGCTGCCCA GGGCCATCAA CATCCCGGCA TGTGTGGGGT GCGGCTCGTC 4440 CCCTCCGTGC CCGGGCCTGG CGCCGCCCTT CGACGTGGAG CTGCACGAGA TGGAGCTCGG 4500 CGGCGTGCCG GGGTCGCCCG AGGATCCCGC CAGCAAGACG CTCTCTGCCC CCGAGACGGC 4560 CATGGAGGAG GAGGCAGGAC CCGCCCCCGC CCCCCACGCC AATGACCAGG AGATGGCCTC 4620 GGAGGAACAG GAAGTGACAT CGCAGGGAGC CAAAAAAAAA GATCATTCTG AACAC 4675 |
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| Sequence Source | Ensembl | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Orthology |
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| Gene Ontology | GO:0005515--protein binding |
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