CGDB Gene Information
| Tag | Content | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| CGDB ID | CGD-XiM-048808 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Ensembl Accession | ENSXMAP00000015354.1 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Name | per1a | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Ensembl Information | ENSXMAG00000015314; ENSXMAT00000015376 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Organism | Xiphophorus maculatus | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| NCBI Taxa ID | 8083 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Circadian Information |
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| Description | period circadian clock 1a [Source:ZFIN;Acc:ZDB-GENE-011220-1](View all) | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Sequence (Fasta) |
MSYDSSTSVP SSSGRGRAPG ACSEDREAES LERNEQKSTC SRSLSNVPGQ GQGGASGGGP 60 GSLSGDQRGS HSDDMDGVSS GNDSGERESE GRRLRDGGTS CGHQSAPSSH SHSSSNGKDS 120 GMILETTDSS KSSNFQSLSP PNGSLAYSLL SNSSEHDPPS TSGWSSDQSA RLQTQKELMK 180 AIKELKLRLP TERKAKGHSG TLSALKYALQ CVRQVRANKE YYHQWSVEEC HGCSLDLSTF 240 TIEELDNITS EYTLKNTDTF SMAVSFLSGK VVYVSPQCSA LLRCKPECLQ GIMFSELLAP 300 QDVSTFYSST APCRLPSWAS CIGSASPPVD CTQEKSMFCR ISANRTQGGE MRYQPFRLTP 360 YQLTLRDSDA AEPQPCCLLI AEKVHSGYEA PRIPPDKRIF TTSHTPSCLF QEVDERAVPL 420 LGYLPQDMVG TPILLYIHPE DRPMMVAIHE KIFQFAGQPF DYSPLRMCAR SGEYVTIDTS 480 WSSFVNPWSR KVAFVVGRHK VRTSPLNEDV FTQAMGCETR VTTPDIVQLS EQIHRLLVQP 540 VHSGSSQGYS SLGSSGSRGS RRSHQQHPSA SAASSSDSNG PAMEVAAAAS HKPMTFQQIC 600 KDVHMVKTNG QQVFIESRNR PLPRRNTSTG AAGVRTINSD PIRDLIADIT HPPSSLVPAA 660 LLQKEPSTSY SYQQINCLDS IIRYLESCNI PNTVKRKCGS SCTASSMSDD DKQPDASGNN 720 KGGSVNLVSE PPPLPPLTMA SKAESVASVT SQCSFSSTIV HVGDKKPPES DIVMEEAPTI 780 PTLIAPPLAT IPKPRASTSS TPLAPTAPSN TTVAPSPLPP PPPQPQASQP ERDSWRSASM 840 GGGAVGGGGA PGRLGLTKEV LSAHTQQEEQ AFLDRFSDLS KLRVLDQTAS LNVRGHAPAG 900 LPRGVRCSRD YPAAGGGTSQ RRGRGGKRLK HQESSDQLSS LPVNRQDPRA NAAPVPLNMP 960 LGPPTNSPSW PSVGSQASIP ATPFPTGMLP MYPIYPQLPQ PLPVPDPTRF PSTQMVPPMM 1020 AFVLPNYMFP QMGLPMAQPG VAPGHFYNPN YAFTGMPPAL APIPSVSNSV PMVGTCPPSR 1080 SSTPQSFTQT PADREGAESP LFQSRCSSPL NLLQLEELPS NRLEVGTALA ASQQPPPSVL 1140 GAAAGGQSSI NQRSSDDPSK ENENAEAVES NQDAMSTSSD LLDLLLQEDS RSGTGSAASG 1200 SGSSGTRSSG SGSGSGSGSG SNGCSSSGTS GTSGSHTSKY FGSIDSSEND HSRKQPAGGS 1260 SSAGGDGGED QFIKCVLQDP IWLLMANTDD KVMMTYQLPV RNMETVLQED REALRNLQKH 1320 QPRFTDEQKK ELSQVHPWIR TGRLPRAINI SGCTGCKCPP SVPPATPFDV EIHEMELCTV 1380 LKTQECSGKD GKALAEAAMD DVQAVDEDEE DEAQRKDAKM EENTEKERLA AETLTDKQET 1440 |
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| Nucleotide Sequence (Fasta) |
CGTGCGTGTA AACTACATTC GCGGAGAGCT CAGAAATGTA AGCAGAGCCA ACATAGGGGC 60 GACAAAGCGA ATTTACTCGA CATTGACTGG ATTTCTGGTT TTTCTTGGAA GAAGTTTGTG 120 TCATTTAAGC GGATGTATCA CATCAACTGT GGTTACGTTT GAACAGAGAT AAGGTGGCCT 180 TTAAGCGACT GGAGCGACTC GCCTCTCTAC AGGAGTGCAG CAAATCTTTT TTTTTTGCTC 240 TCACCAAGAG CTGTTTTTTT TTTTTATCTT CGCACTCTGA CTCCATCGCT CATCCCATCT 300 GTTCGAGGAT CCACGCCAGG GCTGTTTCAT AACAAGAAAT TCATCTGTTG TCTGCGCCTC 360 GTTGAGTGAC ACTTCAAGCT TTTCTGCCCT CACAGAGGGC TTGAAGCCAC CAAGGAAAAG 420 CACTTTTTGT TTTTTAAACC ATCGTTTTTT TCTCTTAAGT TGACAACTAT GATTCACTTG 480 TATTTACATA GTAGTCCCAC TTAAATTTGA GTAGCTCCAG CTGAGCTGAA CAACCTCATT 540 CTACACTAGT ATGAGTTATG ACAGCTCCAC GTCTGTGCCC AGCAGCAGCG GTCGGGGGCG 600 AGCACCGGGG GCCTGCAGCG AGGACCGGGA GGCAGAGTCA CTAGAGAGAA ATGAGCAGAA 660 AAGCACCTGC AGCCGCTCCC TTTCCAACGT CCCCGGCCAG GGACAGGGCG GCGCCTCCGG 720 AGGAGGGCCC GGGAGCCTGT CTGGAGACCA GAGAGGGTCG CACTCAGACG ACATGGACGG 780 CGTCTCCAGC GGAAACGACT CTGGGGAGAG GGAAAGCGAG GGCAGAAGGT TGAGGGACGG 840 AGGGACCTCG TGTGGACATC AGTCGGCGCC CAGCTCCCAC AGTCACAGCT CGTCCAATGG 900 GAAGGACTCC GGCATGATTC TGGAAACCAC AGACAGCAGC AAGAGCTCCA ACTTCCAGAG 960 TCTGTCACCT CCCAATGGCT CTCTGGCCTA CAGCCTGCTG TCCAACAGCT CGGAGCACGA 1020 CCCCCCCTCC ACCTCCGGCT GGAGCAGCGA CCAGTCGGCC AGGCTGCAGA CGCAAAAGGA 1080 ACTAATGAAG GCCATCAAGG AGCTGAAGCT CCGCCTTCCC ACTGAGCGCA AAGCCAAGGG 1140 CCACTCCGGC ACCCTGAGTG CTCTCAAATA CGCCCTGCAG TGTGTCAGGC AGGTCCGAGC 1200 CAACAAAGAG TACTACCACC AGTGGAGTGT GGAGGAGTGT CATGGCTGCA GTCTGGACTT 1260 GTCGACCTTC ACCATAGAGG AGCTCGACAA CATCACTTCA GAATACACCC TGAAAAACAC 1320 AGACACGTTC TCTATGGCCG TGTCCTTCCT GTCGGGGAAG GTCGTGTACG TGTCCCCTCA 1380 GTGTTCAGCC CTGCTGCGCT GCAAGCCCGA GTGTCTCCAG GGAATCATGT TCTCTGAGCT 1440 CCTGGCCCCG CAGGACGTCA GCACCTTCTA CAGCAGCACG GCGCCCTGCC GCCTGCCATC 1500 ATGGGCCTCC TGCATTGGCT CAGCTTCTCC TCCCGTCGAC TGCACCCAGG AGAAGTCCAT 1560 GTTCTGCCGG ATCAGCGCCA ACCGGACACA GGGGGGCGAG ATGCGCTACC AACCATTCCG 1620 CCTGACCCCC TACCAGCTCA CTCTCAGAGA CTCAGACGCT GCAGAACCGC AGCCCTGCTG 1680 CCTGCTCATC GCCGAGAAGG TCCACTCCGG ATACGAAGCT CCCCGTATCC CTCCAGACAA 1740 GAGGATCTTC ACCACCAGTC ACACTCCCAG CTGCCTCTTC CAGGAAGTCG ATGAGAGGGC 1800 AGTACCGCTT TTAGGCTACC TGCCCCAGGA TATGGTGGGA ACCCCCATCC TGCTCTACAT 1860 CCATCCAGAG GACAGGCCAA TGATGGTGGC CATTCATGAG AAAATCTTTC AGTTTGCAGG 1920 ACAGCCATTC GACTACTCGC CCCTGCGGAT GTGCGCCCGC AGTGGAGAAT ACGTCACCAT 1980 CGACACCAGC TGGTCCTCCT TCGTCAACCC TTGGAGCAGG AAGGTGGCGT TTGTTGTCGG 2040 ACGTCACAAA GTCAGAACGA GCCCGCTGAA CGAGGACGTG TTCACCCAGG CGATGGGCTG 2100 TGAGACTCGA GTCACCACGC CTGATATCGT CCAGCTGAGC GAGCAGATCC ACCGACTGCT 2160 TGTCCAGCCG GTCCACAGCG GCAGCTCTCA GGGCTACAGC TCACTGGGGT CCAGCGGCTC 2220 CCGGGGGTCT CGCCGTTCCC ACCAGCAGCA CCCCAGTGCC TCAGCCGCCT CATCCAGCGA 2280 CAGCAACGGC CCCGCCATGG AAGTCGCCGC CGCAGCTTCG CACAAACCTA TGACGTTCCA 2340 GCAAATCTGC AAGGACGTCC ACATGGTCAA GACCAATGGC CAGCAAGTGT TCATCGAGTC 2400 CCGCAACCGT CCATTACCTA GAAGAAACAC CAGCACAGGT GCAGCAGGAG TAAGAACTAT 2460 AAACAGCGAT CCAATCAGAG ACTTGATAGC AGACATAACT CATCCTCCCA GCTCCTTGGT 2520 ACCTGCGGCT CTTCTGCAGA AGGAGCCCTC GACCAGTTAC TCCTACCAGC AGATCAACTG 2580 TCTGGACAGC ATCATCAGAT ATCTGGAGAG CTGTAACATT CCCAACACAG TGAAAAGGAA 2640 GTGCGGCTCC TCCTGCACTG CCTCGTCCAT GTCCGATGAC GATAAACAGC CGGACGCCAG 2700 CGGCAACAAC AAAGGTGGTT CAGTTAACCT CGTAAGTGAA CCACCTCCTC TGCCTCCCCT 2760 GACCATGGCT TCGAAGGCAG AGAGTGTAGC CTCAGTTACG TCTCAGTGTA GCTTCAGCAG 2820 CACCATCGTC CATGTAGGAG ACAAGAAACC TCCCGAGTCA GACATTGTTA TGGAAGAGGC 2880 TCCTACAATT CCAACCCTGA TCGCCCCCCC TCTGGCTACC ATCCCAAAGC CTCGAGCTAG 2940 CACTAGCTCG ACTCCACTTG CTCCAACTGC CCCCAGTAAT ACAACTGTAG CCCCTTCTCC 3000 CCTTCCTCCG CCGCCTCCTC AACCTCAGGC AAGTCAGCCG GAGAGAGACA GCTGGCGGAG 3060 CGCCAGCATG GGAGGCGGGG CAGTGGGAGG GGGCGGAGCT CCAGGCCGGC TGGGCCTGAC 3120 CAAGGAGGTG CTGTCGGCCC ACACCCAGCA GGAGGAGCAG GCATTCCTCG ACCGCTTCAG 3180 CGATCTGAGT AAGCTGCGGG TCCTCGATCA GACGGCGTCT TTGAACGTGC GCGGCCACGC 3240 CCCTGCTGGG CTGCCACGAG GTGTTCGCTG CTCCCGTGAT TACCCAGCAG CTGGAGGCGG 3300 CACCTCTCAG CGCCGGGGCC GCGGCGGTAA GAGACTGAAG CACCAGGAGT CTTCGGACCA 3360 ACTCAGCTCG CTGCCTGTGA ACCGACAGGA CCCTCGAGCG AACGCAGCCC CCGTTCCTCT 3420 AAACATGCCC CTCGGGCCGC CCACAAACTC CCCCTCATGG CCCTCGGTGG GCTCCCAGGC 3480 CAGCATCCCC GCCACTCCCT TCCCCACTGG TATGCTTCCA ATGTACCCCA TCTACCCGCA 3540 ACTGCCCCAG CCTTTGCCCG TACCCGATCC GACACGGTTC CCCTCCACCC AGATGGTACC 3600 TCCCATGATG GCGTTCGTTT TGCCCAACTA CATGTTCCCC CAGATGGGGC TCCCCATGGC 3660 TCAGCCCGGC GTCGCCCCGG GGCATTTCTA CAACCCCAAT TACGCTTTCA CCGGGATGCC 3720 CCCTGCCCTC GCCCCCATCC CCTCTGTCTC CAATTCTGTG CCAATGGTGG GCACCTGCCC 3780 CCCGTCCCGC AGCAGCACCC CACAGTCCTT CACACAGACT CCCGCTGACC GCGAGGGGGC 3840 GGAGTCTCCC CTCTTCCAGT CAAGATGCTC CTCCCCTCTC AACCTGTTGC AGCTAGAGGA 3900 GTTGCCGAGC AACCGGTTAG AAGTCGGCAC TGCTTTGGCA GCGTCGCAGC AACCCCCTCC 3960 CTCTGTGCTG GGCGCAGCAG CTGGGGGGCA AAGTTCAATC AATCAGAGGA GCTCTGACGA 4020 TCCATCCAAG GAGAATGAGA ACGCTGAAGC TGTTGAGTCC AACCAGGACG CAATGTCCAC 4080 TTCTAGTGAC CTGCTGGACC TTCTGCTGCA GGAAGACTCT CGCTCGGGCA CTGGCTCAGC 4140 CGCCTCCGGT TCGGGGTCCT CGGGCACGCG GTCCTCAGGG TCAGGCTCCG GCTCCGGCTC 4200 CGGCTCCGGC TCCAACGGCT GCAGCTCCTC AGGAACCAGT GGCACCAGTG GTAGCCACAC 4260 CAGCAAGTAC TTTGGCAGCA TCGACTCCTC TGAGAATGAC CACTCCCGTA AGCAGCCAGC 4320 AGGGGGCAGC AGCAGCGCTG GAGGAGACGG TGGGGAAGAT CAGTTCATCA AGTGTGTGCT 4380 GCAGGACCCC ATCTGGCTGC TGATGGCAAA CACTGACGAC AAGGTCATGA TGACGTACCA 4440 GCTGCCCGTC AGAAACATGG AGACAGTGCT GCAGGAGGAT CGTGAAGCTC TCAGGAACCT 4500 GCAGAAACAC CAGCCTCGCT TCACGGACGA GCAGAAGAAG GAGCTGAGCC AGGTCCACCC 4560 CTGGATCCGT ACGGGACGCC TGCCGCGGGC CATCAACATC TCCGGCTGCA CGGGCTGCAA 4620 GTGTCCCCCT TCGGTGCCTC CCGCCACGCC GTTCGACGTG GAGATCCACG AGATGGAGCT 4680 GTGCACCGTC CTGAAAACCC AGGAGTGCAG CGGCAAGGAC GGGAAGGCTC TCGCCGAGGC 4740 GGCCATGGAT GACGTCCAGG CAGTAGACGA AGACGAGGAG GATGAGGCGC AGAGGAAAGA 4800 CGCCAAAATG GAAGAAAATA CAGAGAAGGA GAGACTGGCA GCAGAAACTC TGACAGACAA 4860 ACAAGAGACT TAAAAATCTA AGTGAGAAGC GATTGAGTTT GATCACATTT CTGCTGATCT 4920 GCAGAAGAAA AAAAAAATCA CGCACCTTCC AGGACATGTA GAGCTCCACG TTGCACGCTC 4980 TTTTGGGATG GTAAGGTGCA TATTAATCCA CAACACTGCC ATTTACTGCT GGACTGGTCA 5040 GACTGAACTG CTCTAAATGT CTGACTGTGA TCACACAGCA TCGGGCATGT TGTATGGGAC 5100 TGCAGGAGAA CGGCCTTGAA AACCACCAGA TACTCTCACT CAGTTTTAGA GAGTGACTTC 5160 TAGTTCCTTC TTTCCTTTTT TGTTCTCTTT TGTTCCTGTA TGCATATTTA TTTGAGCTGT 5220 AAAGTTTATA GAGGACTAAG GGCGAATATG TTGGAAATAA AGACTGATGA GCCACATTAC 5280 AGAGTTGAAG CTTGAGAAGA CAAAGGGACG CCTCCTCTGT TGCTGTTCTT CATATTGAAT 5340 GTTTCTAGAA ACACTGCTTT TTTTTCTTTT TTCTTTTTTT TTTACTTTGA GTATATTTTT 5400 GTACTTTAAG CCCCTACAGC TACAGAAGAC AAAACCACCC CAAAATGAAT AAATCATGTT 5460 GTCAATATGT CTGAATTGCT GTCAGAAAAG AAAAAAAGTT TTTAACCCAG AAGTCAAGCA 5520 CTTTTCATTT GAGCTGCCCC TCGTTGTGGC ACGGTGGCAA TCACCAGAAA ACTGACTGGC 5580 ACTTTGATTG ACTCTACAGT TCAAGTTTCA TGTGGATGAT GAATAAAGCT GCTGTGATGG 5640 ACAGTATTCC TCCAAGTGGT GGTCACTTTT CAGTTTATGT GTTAGCCGTG CTCGCTCGTG 5700 GCTTTAAGTA GCTTTTCAAA GAGATCAGTG CTTTTCTTCA TAAACACCCT GACAGTTTTC 5760 CCCTGTTTTC CCCACTCACT TCTTCTCTCT TTCTCTGTCT CTGTGGCACT GTTCTGGTCA 5820 TGTGATGTTC TACTCTTCAT GGCGTCAGTG GCATCTGCAG CAGTTTCTTA AACATTTGGT 5880 GAAGTTCTTT GTACAAAATG AAAACAATAA AATCCCTTCA AATGTCATTG AAACAC 5936 |
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| Sequence Source | Ensembl | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Orthology |
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| Gene Ontology | GO:0005515--protein binding |
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