CGDB Gene Information

Tag Content
CGDB ID CGD-TeN-071576
Ensembl Accession ENSTNIP00000010001.1
Protein Name per1a
Ensembl Information ENSTNIG00000007198; ENSTNIT00000010180
Organism Tetraodon nigroviridis
NCBI Taxa ID 99883
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
CT 0 CT 12 DD2 5.8 gluteal muscles Predicted from orthologs F7AU00
ZT 19 ZT 7 LD 2 muscle Predicted from orthologs H8ZXB9
ZT 4 ZT 21 LD 2 human HaCaT keratinocytes Predicted from orthologs O15534
CT 0 CT 12 DD2 4 U2OS cells Predicted from orthologs O15534
ZT 0 ZT 12 LD 2 muscle Predicted from orthologs W5QC67
ZT 4 ZT 0 LD 5 SCN Predicted from orthologs W5QC67
ZT 12 ZT 0 LD 30 abdominal adipose tissue Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 11 basolateral nucleus of the amygdala Predicted from orthologs Q8CHI5
CT 12 CT 20 DD17 6.25 colon Predicted from orthologs Q8CHI5
ZT 18 ZT 6 LD 2 decidua Predicted from orthologs Q8CHI5
ZT 4 ZT 16 LD 3.5 entral nucleus of the amygdala Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 8 hippocampus Predicted from orthologs Q8CHI5
ZT 9 ZT 0 LD 48 intestinal jejunal mucosa Predicted from orthologs Q8CHI5
CT 12 CT 0 DD17 16.67 liver Predicted from orthologs Q8CHI5
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q8CHI5
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 7 nucleus accumbens shell Predicted from orthologs Q8CHI5
CT 20 CT 0 DD1 1.71 PC12 cell Predicted from orthologs Q8CHI5
ZT 0 ZT 16 LD 7.5 prefrontal cortex Predicted from orthologs Q8CHI5
ZT 4 ZT 16 LD 3 SCN Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 15 SCN Predicted from orthologs Q8CHI5
ZT 4 ZT 20 LD 3 SCN Predicted from orthologs Q8CHI5
ZT 8 ZT 0 LD 4.76 uteri Predicted from orthologs Q8CHI5
ZT 8 ZT 20 LD 7 ventral tegmental area Predicted from orthologs Q8CHI5
Descriptionperiod circadian clock 1a [Source:ZFIN;Acc:ZDB-GENE-011220-1](View all)
Protein Sequence
(Fasta)		 SSGNDSGERE SEGGMERETH GRESTRSSRS SCNGKDSGLM LETTESNKSS NFQSLSPPSG 60
SLAYSLLSNS TEQDLPSTSG CSSNQSARVQ TQKELMKAIK ELKLRLPSER KAKGHSSTLN 120
ALKYALQCVK QVRANKEYYH QWSVEECHGC SLDLSAFTIE ELDNITSEYT LKNTDTFSIA 180
VSFLSGKVVY VSPQGSSLLR CKPECLQGTV FSELLAPQDV STFYSGTAPC RLPPWASCIG 240
SVSTPVDYTQ EKSMFCRISA DRTQGGEMRY CPFRLTPYQL TIKDSDAAEP QPCCLLIAER 300
VHSGYEAPRI PPDKRIFTTS HTPSCLFQEV DERAVPLLGY LPQDLVGTPT LLHIHPDDRP 360
MMVAIHEKIF QIAGQPFEYA PLRMCARSGE YLTIDTSWSS FVNPWSRKVA FVVGRHKVRT 420
SPLNEDVFAT PPGYESRVTT PDVIQLSEQI HRILAQPVHN GGSQGYSSLG SSGSRGSHRS 480
HQQHLSAASS SDSNGPAMDD AAAAVALHKP MTFQQICKDV HMVKTNGQQV FIESRHRPAP 540
RKSSAGPANI RAAPSDPIRN AMKPPSALLP APLVQKEAHT GYSYQQINCL DSIIRYLDSC 600
NIPNTVKRKC GSSSCTSTSD EDRQQEANGN KAPSGGQKVS SDPTSVGAPV ELVGEPPPLP 660
PLTMATKAES VASITSQCSF SSTIVHVGDK KPPESADIVM EDVPTTPPLA APAAALSAPA 720
GSPAPLAVIR MGLTKEVLSA HTQQEEQAFL DRFKDLSKLR VFDQTASSAL RWQPPSANPL 780
SRGTRHRRGR GGKRLKHQEP SDQRSSRGPS RSHVDPRTST APLPASMPAA PFPPGMLPIY 840
PVYPPITQPF SQPVPDPSRF PPAQMLPPMM AFVLPNYMFP QPVSTAAPAV ATVPNPVPLP 900
ATIDPSRSST PQSYGQNPPE REGAESPLFQ SRCSSPLNLL QLEESPSNRL EGAAGGGQSP 960
ANPGSSDDTS KGETNESNQD AMSTSSDLLD LLLQEDSRSG TGSAASGSGS SGTRSSGSGS 1020
GSNGCSSSGT SGTSSSQGSH TSKYFGSIDS SENDHARKQP AGGSSSAGGE GEEQFIKCVL 1080
QDPIWLLMAN TDDKVMMTYQ LPVRDMETVL REDREALRSM QKHQPRFTED QKRELSQVHP 1140
WVRTGRLPRA INISGCKGCK SPPVVPPADP FDVEIHEMEL CSVLNAQEDG GGK 1193
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-EqC-020994Equus caballus47.72 0.00e+00 953.7
CGD-GaM-021007Gadus morhua76.65 0.00e+00 704.1
CGD-HoS-021038Homo sapiens (Human)48.12 0.00e+00 963.8
CGD-OvA-022197Ovis aries46.97 0.00e+00 949.9
CGD-RaN-021793Rattus norvegicus47.7 0.00e+00 963.8
Gene Ontology

GO:0005515--protein binding