CGDB Gene Information

Tag Content
CGDB ID CGD-FeC-031667
Ensembl Accession ENSFCAP00000014092.3
Protein Name PER1
Ensembl Information ENSFCAG00000015191; ENSFCAT00000015196
Organism Felis catus
NCBI Taxa ID 9685
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
CT 0 CT 12 DD2 5.8 gluteal muscles Predicted from orthologs F7AU00
ZT 19 ZT 7 LD 2 muscle Predicted from orthologs H8ZXB9
ZT 4 ZT 21 LD 2 human HaCaT keratinocytes Predicted from orthologs O15534
CT 0 CT 12 DD2 4 U2OS cells Predicted from orthologs O15534
ZT 0 ZT 12 LD 2 muscle Predicted from orthologs W5QC67
ZT 4 ZT 0 LD 5 SCN Predicted from orthologs W5QC67
ZT 12 ZT 0 LD 30 abdominal adipose tissue Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 11 basolateral nucleus of the amygdala Predicted from orthologs Q8CHI5
CT 12 CT 20 DD17 6.25 colon Predicted from orthologs Q8CHI5
ZT 18 ZT 6 LD 2 decidua Predicted from orthologs Q8CHI5
ZT 4 ZT 16 LD 3.5 entral nucleus of the amygdala Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 8 hippocampus Predicted from orthologs Q8CHI5
ZT 9 ZT 0 LD 48 intestinal jejunal mucosa Predicted from orthologs Q8CHI5
CT 12 CT 0 DD17 16.67 liver Predicted from orthologs Q8CHI5
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q8CHI5
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 7 nucleus accumbens shell Predicted from orthologs Q8CHI5
CT 20 CT 0 DD1 1.71 PC12 cell Predicted from orthologs Q8CHI5
ZT 0 ZT 16 LD 7.5 prefrontal cortex Predicted from orthologs Q8CHI5
ZT 4 ZT 16 LD 3 SCN Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 15 SCN Predicted from orthologs Q8CHI5
ZT 4 ZT 20 LD 3 SCN Predicted from orthologs Q8CHI5
ZT 8 ZT 0 LD 4.76 uteri Predicted from orthologs Q8CHI5
ZT 8 ZT 20 LD 7 ventral tegmental area Predicted from orthologs Q8CHI5
Descriptionperiod circadian clock 1 [Source:HGNC Symbol;Acc:HGNC:8845](View all)
Protein Sequence
(Fasta)		 MNGPLEGADG GGDSGPGESF CPGGAPSPGP PQHRSCPGPS LADDTDANSN GSSGNESNGP 60
ESRGASQRSS HSSSSGNGKD SALLETTESS KSTNSQSPSP PSSSIAYSLL SASSEQDNPS 120
TSGCSSEQSA RARTQKELMT ALRELKLRLP PERRGKGRSG TLATLQYALA CVKQVQANQE 180
YYQQWSLEEG EPCAMDMSTY TLEELEHITS EYTLRNQDTF SVAVSFLTGR IVYISEQAGT 240
LLRCKRDVFR GARFSELLAP QDVGVFYGST APSRLPTWGA GASAGSGLKD FTQEKSVFCR 300
IRGGPDRDSG PRYQPFRLTP YVTKIRVSDG APAQPCCLLI AERIHSGYEA PRIPPDKRIF 360
TTRHTPSCLF QDVDERAAPL LGYLPQDLLG APVLLFLHPE DRPLMLAIHK KILQLAGQPF 420
DHSPIRFCAR NGEYVTMDTS WAGFVHPWSR KVAFVLGRHK VRTAPLNEDV FTPPAPSPAL 480
SLDSDIQELS EQIHRLLLQP VHSPSPTGLC GVGPAASPGP LLSPGSSSDS NGGDAEGPGP 540
PAPVTFQQIC KDVHLVKHQG QQLFIESRAW PPPRPRLPAT GTFKAKTLSC QSPDPELEMV 600
PAPVQAPLTL TPEEVERKEA NGCSYQQINC LDGILRYLES CNIPSTTKRK CASSSCTTSS 660
ASDDDKQRTG PLPLGAKKDA SAVLSGEGAA PQKEPVVGGA LSPLALANKA ESVVSVTSQC 720
SFSSTIVHVG DKKPPESDII MMEDLPGLAP GPAPSPAPSP TVAPDPAPDA YRPVGLTKAV 780
LSLHTQKEEQ AFLSRFRDLG RLRGLDGSSP APLAPGERGC HHGPAPPGRR HHCRSKAKRS 840
RHHQTPRAEA PCFTSHPSPV PPSAPWPPPP ATAPFPAMVQ PYPLPVFPRG GPHPPPSAPA 900
SGPPAAFPAP LVTPMVALVL PNYLFPTPSG YPYGVPQTPA EGPPTPASHS PSPSLPPPPP 960
SPPHRPDSPL FNSRCSSPLQ LNLLQLEEPP RVEGGAVAGG TGSSAGPPPP SEEAAEPEAR 1020
LVEVTESSNQ DALSGSSDLL ELLLQEDSRS GTGSASSGSG LGSGSGAGSH EGGSTSASIT 1080
RSSQSSHTSK YFGSVDSSEA EAGAAPARAE PGDQVIKYVL QDPIWLLMAN ADQRVMMTYQ 1140
VPSRDMASVL KQDRERLRAM QKQQPRFSED QRRELGAVHS WVRKGQLPRA LDVMACVDCG 1200
SSTRDPGHPD DPLFSELDGL GLEPMEEGGG EGGGGGGGSG EGEGGEEAGA QAGARASSSQ 1260
DLAMEEEEQG GSPSSPALPA TENGTS 1286
Nucleotide Sequence
(Fasta)		 ATGAATGGCC CCCTGGAAGG GGCTGATGGG GGAGGGGACT CCGGACCGGG GGAGTCCTTT 60
TGCCCTGGAG GGGCCCCATC CCCTGGGCCG CCACAGCACC GGTCTTGCCC CGGCCCCAGC 120
CTGGCTGATG ACACAGATGC CAACAGCAAT GGCTCCAGCG GCAATGAGTC CAACGGGCCC 180
GAGTCCAGGG GCGCATCCCA GCGGAGCTCA CACAGCTCCT CCTCTGGCAA CGGCAAGGAC 240
TCCGCCCTGC TGGAGACCAC TGAGAGCAGC AAGAGCACAA ACTCTCAGAG TCCCTCCCCA 300
CCCAGCAGCT CCATTGCCTA CAGCCTCCTG AGCGCCAGCT CCGAGCAGGA CAACCCGTCT 360
ACCAGTGGCT GCAGCAGTGA ACAGTCCGCC CGGGCCAGGA CCCAGAAGGA ACTCATGACG 420
GCTCTGCGGG AGCTCAAGCT TCGGCTGCCG CCAGAGCGTC GGGGCAAGGG CCGCTCCGGG 480
ACCCTGGCCA CGCTTCAGTA TGCTCTGGCC TGTGTCAAGC AGGTGCAGGC CAACCAAGAA 540
TACTACCAGC AGTGGAGCCT GGAGGAGGGC GAACCTTGTG CCATGGACAT GTCCACTTAT 600
ACCCTGGAGG AGCTGGAGCA CATCACGTCT GAGTATACGC TCCGCAACCA GGATACCTTC 660
TCCGTGGCGG TCTCCTTCCT GACGGGCCGC ATCGTCTACA TCTCAGAGCA GGCGGGTACC 720
CTGCTGCGCT GCAAGCGGGA CGTGTTCCGG GGCGCCCGCT TCTCTGAGCT CCTGGCCCCC 780
CAGGATGTGG GCGTCTTCTA CGGTTCCACT GCCCCATCTC GCCTGCCCAC CTGGGGCGCC 840
GGGGCCTCGG CAGGTTCAGG CCTCAAGGAC TTCACCCAGG AGAAGTCTGT CTTCTGCCGT 900
ATCAGAGGGG GTCCTGACCG GGATTCAGGG CCTCGGTACC AGCCATTCCG CCTAACGCCG 960
TACGTGACCA AGATCCGGGT CTCAGACGGG GCCCCCGCGC AGCCATGCTG CCTGCTCATT 1020
GCAGAGCGCA TCCACTCGGG TTACGAAGCT CCCCGGATCC CTCCTGACAA GAGGATCTTC 1080
ACTACTCGGC ACACGCCCAG CTGCCTCTTC CAGGATGTGG ACGAAAGGGC CGCCCCCCTG 1140
CTGGGCTACC TTCCCCAGGA CCTCCTGGGG GCCCCAGTCC TCCTGTTCCT GCACCCTGAG 1200
GACCGGCCCC TCATGTTGGC CATCCACAAG AAGATCCTGC AGTTGGCTGG CCAGCCCTTC 1260
GATCACTCCC CCATCCGCTT CTGCGCCAGG AATGGGGAGT ACGTCACCAT GGACACCAGC 1320
TGGGCCGGCT TCGTGCACCC CTGGAGCCGC AAGGTGGCCT TTGTGTTGGG ACGCCACAAA 1380
GTGCGCACGG CACCCCTGAA CGAGGACGTG TTCACTCCTC CGGCCCCCAG CCCAGCTTTG 1440
TCTCTGGACT CTGACATCCA GGAGCTGTCC GAACAGATCC ACAGGCTGCT GTTACAGCCG 1500
GTACACAGCC CCAGTCCCAC CGGGCTCTGT GGGGTCGGCC CCGCCGCTTC CCCGGGCCCT 1560
CTCCTCAGCC CTGGCTCCTC CAGTGATAGC AACGGGGGTG ACGCTGAGGG GCCCGGGCCT 1620
CCCGCCCCGG TGACCTTCCA GCAGATCTGT AAAGACGTGC ACCTGGTGAA ACATCAGGGA 1680
CAGCAGCTTT TCATCGAGTC CCGCGCTTGG CCTCCGCCCC GGCCCCGCCT CCCTGCCACA 1740
GGCACCTTCA AGGCCAAGAC CCTTTCCTGC CAGTCCCCAG ACCCGGAGCT GGAGATGGTC 1800
CCTGCTCCAG TCCAGGCTCC ACTCACCTTG ACCCCTGAGG AGGTGGAGAG AAAAGAAGCC 1860
AATGGTTGTT CCTACCAGCA GATCAACTGC TTGGACGGCA TCCTCAGGTA CCTGGAAAGC 1920
TGTAACATTC CCAGCACCAC CAAGCGTAAA TGTGCCTCCT CCTCCTGCAC CACCTCGTCA 1980
GCCTCCGACG ATGACAAGCA GAGGACAGGT CCGCTCCCTT TGGGGGCCAA GAAAGATGCG 2040
TCGGCGGTGC TGTCCGGGGA GGGGGCCGCC CCACAGAAGG AGCCGGTGGT GGGAGGCGCC 2100
CTGAGCCCGC TCGCCCTGGC CAATAAGGCA GAGAGCGTGG TGTCCGTCAC CAGTCAGTGT 2160
AGCTTCAGCT CCACCATCGT CCACGTGGGA GACAAGAAGC CCCCGGAGTC GGACATCATC 2220
ATGATGGAGG ACCTGCCTGG CCTGGCTCCA GGCCCAGCCC CCAGCCCAGC CCCCAGCCCC 2280
ACAGTAGCCC CTGACCCAGC CCCAGATGCC TACCGCCCGG TGGGCCTGAC CAAGGCCGTG 2340
CTGTCCCTGC ACACACAGAA GGAGGAGCAG GCCTTCCTCA GCCGCTTCCG AGATCTCGGC 2400
CGACTGCGTG GACTTGACGG CTCCTCCCCG GCCCCCTTGG CCCCTGGCGA GCGAGGCTGC 2460
CACCACGGCC CCGCACCCCC CGGTCGCCGA CACCACTGCC GATCCAAAGC CAAGCGCTCA 2520
CGCCACCACC AGACCCCCCG GGCTGAAGCC CCTTGCTTCA CCTCCCACCC GTCCCCCGTG 2580
CCACCCTCTG CCCCCTGGCC GCCCCCACCG GCCACTGCTC CCTTCCCAGC CATGGTCCAG 2640
CCCTACCCTC TCCCGGTGTT CCCACGGGGA GGCCCCCACC CTCCTCCCTC CGCCCCTGCT 2700
TCCGGGCCCC CTGCAGCTTT CCCCGCCCCC CTAGTGACCC CGATGGTAGC CTTGGTGCTC 2760
CCTAACTACC TGTTCCCGAC CCCGTCCGGC TATCCCTATG GGGTACCCCA GACTCCCGCT 2820
GAAGGGCCTC CAACCCCGGC CTCCCACTCC CCCTCTCCGT CCCTGCCCCC ACCGCCCCCC 2880
AGCCCTCCCC ACCGGCCCGA CTCTCCCCTG TTCAACTCGA GATGCAGCTC CCCACTCCAG 2940
CTAAATCTGC TGCAGCTTGA GGAGCCCCCC CGTGTTGAAG GGGGTGCTGT TGCAGGGGGC 3000
ACTGGGAGCA GTGCTGGGCC CCCGCCTCCC AGTGAGGAGG CTGCTGAGCC AGAGGCCAGA 3060
CTGGTGGAGG TAACGGAGTC CTCCAATCAG GACGCCCTGT CGGGCTCCAG CGACCTGCTG 3120
GAGTTGCTGC TGCAAGAAGA TTCTCGATCT GGCACGGGCT CCGCCTCCTC GGGCTCCGGC 3180
TTGGGCTCCG GGTCCGGGGC AGGCTCCCAC GAGGGAGGCA GCACCTCAGC CAGCATCACA 3240
CGCAGCAGTC AGAGCAGCCA CACGAGCAAG TACTTTGGCA GCGTTGACTC TTCTGAGGCC 3300
GAAGCCGGGG CCGCCCCGGC CAGGGCTGAG CCTGGGGACC AGGTCATTAA GTACGTGCTC 3360
CAGGATCCCA TCTGGCTGCT CATGGCCAAC GCCGACCAGC GCGTCATGAT GACCTACCAG 3420
GTGCCCTCCA GGGACATGGC CTCTGTGCTG AAGCAGGACC GGGAGCGGCT CCGGGCCATG 3480
CAGAAGCAAC AGCCTCGCTT CTCAGAGGAC CAGCGCAGGG AACTGGGTGC TGTGCACTCC 3540
TGGGTCCGGA AGGGTCAGCT GCCTCGGGCC CTCGATGTGA TGGCCTGTGT GGATTGCGGC 3600
AGTAGCACCC GAGACCCCGG CCACCCTGAT GACCCGCTCT TCTCGGAACT GGACGGACTG 3660
GGACTGGAGC CCATGGAGGA GGGCGGAGGC GAGGGTGGTG GTGGTGGTGG CGGCAGTGGC 3720
GAGGGTGAGG GCGGAGAGGA GGCCGGCGCT CAAGCTGGGG CCAGGGCCTC AAGCTCCCAA 3780
GACCTGGCCA TGGAGGAGGA GGAACAAGGT GGGAGCCCAT CCAGTCCAGC CTTACCTGCC 3840
ACGGAAAATG GCACCAGCTA GACCACATTT TGAGGCCACC TCTGGGAGTG CATGAGAAGC 3900
TTCCTTCTCC CTTCTTCCAC CTCTCAGAAC CAGCCGTGGC TGGACCAACC GATAGGAAAC 3960
TGCCCCAGCT TCTCCCGCTT AGGGGGCCGG ACCCCCATCA GCAGCCCAGG ATCCAGGGGC 4020
AGCTTCTGGC TTCTTAGGAT ACAGAGGGTG GGACTCTTCA GCCAGCCCAG CCCAGCGAAG 4080
CCTCCTCTCC CGCCGCTGGT GAGGAGACCT TCCTTCCCCT GGACAAGGCT GCTGACGAGC 4140
TGCTGAAGTG GTCTCTCCAA GCCCTGGCTG AGCCCAAGTC CAGGTCCCTG AGGGTTGGGG 4200
CTACACTTAT TTATTGGGGG AGACAGCTCG CTCTCCCACC TCCTTCCTAG AAGGGAGGAG 4260
GAGGGCCCGA GGCCCAAGCA GGACCCAGCG GTCCAAACCC CTAGCTGCTC CAGGGTGGGG 4320
GACGTTGGTG GACCATGGAG TCCCTGGTGC TGCCCCTCAG GTGGGACCCA GGTGTTCTCA 4380
GCTGTACCCT CTACCGATGG CATTTGTGTT TTTGATATTG TGTCTGTTAT TATTTTTTAA 4440
TACAAAAAGA AAAAAAAAAG ACTGTGCAAT GAAGTTTGGG GACTGGGTGA AGGGAGCTCT 4500
TGGTGGAGGG GTGTGGCCCC GCTTCCAGGG AGGTGGTGGC GAGGGTGAGC GACCTCCTGC 4560
CTTCTCTTCT TCCACACCCT TTCCAGCTGG GTTTGTCCTG GGCGGGAGAT GAGGGGCAAC 4620
TTGAGTCTAG GGTTTGAACG AGTTCCAGCG CGGACAGGTG CCCCACGGGG AGGGAGGCCC 4680
ACCCAGCCGG CCAACGCACG GAGACGGCCG GGTCTCGGTG GCCAAGGGAC GGGAAGTCAC 4740
GTGCCCATCC ATGGTCGAAC TGGTC 4765
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-EqC-020994Equus caballus60.83 0.00e+00 1395.2
CGD-GaM-021007Gadus morhua55.17 1.00e-175 614
CGD-HoS-021038Homo sapiens (Human)60.33 0.00e+00 1401
CGD-OvA-022197Ovis aries59.54 0.00e+00 1369
CGD-RaN-021793Rattus norvegicus61.78 0.00e+00 1366.3
Gene Ontology

GO:0005515--protein binding
GO:0043966--histone H3 acetylation
GO:0019900--kinase binding
GO:0070888--E-box binding
GO:0042634--regulation of hair cycle
GO:0032922--circadian regulation of gene expression
GO:0043967--histone H4 acetylation
GO:0007623--circadian rhythm
GO:0031625--ubiquitin protein ligase binding
GO:0000978--RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0005737--cytoplasm
GO:0005634--nucleus
GO:0045944--positive regulation of transcription from RNA polymerase II promoter
GO:0008134--transcription factor binding
GO:0045892--negative regulation of transcription, DNA-templated
GO:0000122--negative regulation of transcription from RNA polymerase II promoter
GO:0000989--transcription factor activity, transcription factor binding
GO:0010608--posttranscriptional regulation of gene expression
GO:0070932--histone H3 deacetylation
GO:0051591--response to cAMP
GO:0000976--transcription regulatory region sequence-specific DNA binding
GO:0031490--chromatin DNA binding
GO:0002028--regulation of sodium ion transport
GO:0042752--regulation of circadian rhythm
GO:2000323--negative regulation of glucocorticoid receptor signaling pathway
GO:0009416--response to light stimulus
GO:0043153--entrainment of circadian clock by photoperiod
GO:0097167--circadian regulation of translation