CGDB Gene Information

Tag Content
CGDB ID CGD-ChS-031205
Ensembl Accession ENSCSAP00000006954.1
Protein Name PER1
Ensembl Information ENSCSAG00000010737; ENSCSAT00000008821
Organism Chlorocebus sabaeus
NCBI Taxa ID 60711
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
CT 0 CT 12 DD2 5.8 gluteal muscles Predicted from orthologs F7AU00
ZT 19 ZT 7 LD 2 muscle Predicted from orthologs H8ZXB9
ZT 4 ZT 21 LD 2 human HaCaT keratinocytes Predicted from orthologs O15534
CT 0 CT 12 DD2 4 U2OS cells Predicted from orthologs O15534
ZT 0 ZT 12 LD 2 muscle Predicted from orthologs W5QC67
ZT 4 ZT 0 LD 5 SCN Predicted from orthologs W5QC67
ZT 12 ZT 0 LD 30 abdominal adipose tissue Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 11 basolateral nucleus of the amygdala Predicted from orthologs Q8CHI5
CT 12 CT 20 DD17 6.25 colon Predicted from orthologs Q8CHI5
ZT 18 ZT 6 LD 2 decidua Predicted from orthologs Q8CHI5
ZT 4 ZT 16 LD 3.5 entral nucleus of the amygdala Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 8 hippocampus Predicted from orthologs Q8CHI5
ZT 9 ZT 0 LD 48 intestinal jejunal mucosa Predicted from orthologs Q8CHI5
CT 12 CT 0 DD17 16.67 liver Predicted from orthologs Q8CHI5
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q8CHI5
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 7 nucleus accumbens shell Predicted from orthologs Q8CHI5
CT 20 CT 0 DD1 1.71 PC12 cell Predicted from orthologs Q8CHI5
ZT 0 ZT 16 LD 7.5 prefrontal cortex Predicted from orthologs Q8CHI5
ZT 4 ZT 16 LD 3 SCN Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 15 SCN Predicted from orthologs Q8CHI5
ZT 4 ZT 20 LD 3 SCN Predicted from orthologs Q8CHI5
ZT 8 ZT 0 LD 4.76 uteri Predicted from orthologs Q8CHI5
ZT 8 ZT 20 LD 7 ventral tegmental area Predicted from orthologs Q8CHI5
Descriptionperiod circadian clock 1 [Source:HGNC Symbol;Acc:HGNC:8845](View all)
Protein Sequence
(Fasta)		 MSGPLEGADG GGDPRPGESF CPGGVPSPGP PQHRPCPGPS LADDTDANSN GSSGNESNGH 60
ESRGASQRSS HSSSSGNGKD SALLETTESS KSTNSQSPSP PSSSIAYSLL SASSEQDNPS 120
TSGCSSEQSA RARTQKELMT ALRELKLRLP PERRGKGRSG TLATLQYALA CVKQVQANQE 180
YYQQWSLEEG EPCSMDMSTY TLEELEHITS EYTLRNQDTF SVAVSFLTGR IVYISEQAAV 240
LLRCKRDVFR GTRFSELLAP QDVGVFYGST APSRLPTWGT GASAGSGLRD FTQEKSVFCR 300
IRGGPDRDPG PRYQPFRLTP YVTKIRVSDG APAQPCCLLI AERIHSGYEA PRIPPDKRIF 360
TTRHTPSCLF QDVDERAAPL LGYLPQDLLG APVLLFLHPE DRPLMLAIHK KILQLAGQPF 420
DHSPIRFCAR NGEYVTMDTS WAGFVHPWSR KVAFVLGRHK VRTAPLNEDV FTPPAPSPAP 480
TLDTDIQELS EQIHRLLLQP VHSASPTGLC GVGPVTSPGP LHSPGSSSDS NGGDAEGPGP 540
PAPVTFQQIC KDVHLVKHQG QQLFIESRAR PQPRPRLPAT GTFKARALPC QSPDPELETG 600
SAPIPAPLAL APEEAERKEA SSCSYQQINC LDSILRYLES CNLPSTTKRK CASSSSYTTS 660
SASDDDKQRT GPVPVGTKKD PPSAVLSGEG ATPRKEPVVG GTLSPLALAN KAESVVSVTS 720
QCSFSSTIVH VGDKKPPESD IIMMEDLPGL APGPAPSPAP SPTVAPDPAP DAYRPVGLTK 780
AVLSLHTQKE EQAFLSRFRD LGRLRGLDSS STAPSALGER GCHHGPAPPS RRHHCRSKAK 840
RSRHHQNPRA EAPCYVSHPS PVPPSTPWPA PPATTHFPAV VQPYPLPVFS PRGGPQPLPP 900
APTSVPQAAF PTPLVTPMVA LVLPNYLFPT PSSYPYGAPQ TPAEGPPTPA SYSPSPSLPA 960
LPPSPPRRPD SPLFNSRCSS PLQLNLLQLE ELPRAEGAAG AGGPGSSAGP PPPSEEAAEP 1020
EARLVEVTES SNQDALSGSS DLLELLLQAD SRSGTGSAAS GSLGSGLGSG SGSGSHEGGS 1080
TSASITRSSQ SSHTSKYFGS IDSSEAEAGA ARGGAEPGDQ VIKYVLQDPI WLLMANADQR 1140
VMMTYQVPSR DMTSVLKQDR ERLRAMQRQQ PRFSEDQRRE LGAVHSWVRK GQLPRALDVM 1200
ACVDCGSSTQ DPGHPDDPLF SELDGLGLEP MEEGGGEQGS CGGGSGEGEG CDEARAQRGA 1260
KASSSQDLAM EEEKEGRSSA SPALPTAGNG TS 1292
Nucleotide Sequence
(Fasta)		 CTGGAGCGGC GGCGGGCAGG CGGGCCGAGG ACACTCCCGC AACCAGGTAC TGGCTGTGCT 60
CGAACTTGTC AACCCTCAGA GACTTAAATC TTCCACCTCA CTCCCTCAGC CAGGCCTCCA 120
GGCCCCCCCC GTGCATCCGT GGTGGCCTCT TCGCCTTCTC TGTTCTGTTC TCCCCATGGC 180
CCAGACATGA GTGGCCCCCT AGAAGGGGCT GACGGGGGAG GGGACCCCAG GCCTGGGGAA 240
TCATTTTGTC CTGGGGGGGT CCCATCCCCT GGGCCCCCAC AGCACCGGCC TTGCCCAGGC 300
CCCAGCCTGG CCGATGACAC CGATGCCAAC AGCAATGGTT CAAGTGGCAA TGAGTCCAAC 360
GGGCATGAGT CCAGGGGCGC ATCTCAGCGG AGCTCACACA GCTCCTCCTC AGGCAATGGC 420
AAGGACTCAG CCCTGCTGGA GACCACTGAG AGCAGCAAGA GCACAAACTC TCAGAGCCCA 480
TCCCCACCTA GCAGTTCCAT TGCCTACAGC CTCCTGAGTG CCAGCTCAGA GCAGGACAAC 540
CCGTCCACCA GTGGCTGCAG CAGTGAACAG TCAGCCCGGG CGAGGACCCA GAAGGAACTC 600
ATGACAGCAC TTCGAGAGCT CAAGCTTCGA CTGCCACCAG AGCGCCGGGG CAAGGGCCGC 660
TCTGGGACCC TGGCCACGCT GCAGTACGCG CTGGCCTGTG TCAAGCAGGT GCAGGCCAAC 720
CAGGAGTACT ACCAGCAGTG GAGCCTGGAG GAGGGCGAGC CTTGCTCCAT GGACATGTCC 780
ACCTATACTC TGGAGGAGCT GGAGCACATC ACGTCTGAGT ACACGCTTCG TAACCAGGAT 840
ACCTTCTCAG TGGCTGTCTC CTTCCTGACG GGCCGAATCG TCTACATTTC GGAGCAGGCA 900
GCTGTCCTGC TGCGTTGCAA GCGGGACGTG TTCCGGGGTA CCCGCTTCTC CGAGCTCCTG 960
GCTCCTCAGG ATGTGGGAGT CTTCTATGGT TCCACTGCTC CATCTCGCCT GCCCACCTGG 1020
GGCACAGGGG CCTCAGCAGG TTCAGGCCTC AGGGACTTTA CCCAGGAGAA GTCTGTCTTC 1080
TGCCGTATCA GAGGAGGTCC TGACCGGGAT CCAGGGCCTC GGTACCAGCC ATTCCGCCTA 1140
ACCCCATATG TGACCAAGAT CCGGGTCTCA GATGGGGCCC CTGCACAGCC ATGCTGCCTG 1200
CTGATTGCAG AGCGTATCCA CTCGGGTTAC GAAGCTCCCC GGATACCCCC TGACAAGAGG 1260
ATTTTCACTA CACGGCACAC ACCCAGCTGC CTCTTCCAGG ATGTGGATGA AAGGGCTGCC 1320
CCCCTGCTGG GCTACCTGCC CCAGGACCTC CTGGGGGCCC CAGTGCTCCT GTTCCTGCAC 1380
CCTGAGGACC GACCCCTCAT GCTGGCTATC CACAAGAAGA TCCTGCAGTT GGCGGGCCAG 1440
CCCTTTGACC ACTCCCCCAT CCGCTTCTGT GCCCGCAACG GGGAGTATGT CACCATGGAC 1500
ACCAGTTGGG CTGGCTTTGT GCATCCCTGG AGCCGCAAGG TAGCCTTCGT GTTGGGCCGC 1560
CACAAAGTAC GCACGGCCCC GCTGAATGAG GACGTGTTCA CTCCCCCGGC CCCCAGCCCA 1620
GCTCCGACCC TGGACACTGA TATCCAGGAG CTGTCAGAGC AGATCCACCG GCTGCTGCTA 1680
CAGCCCGTGC ACAGCGCCAG CCCCACAGGA CTCTGTGGAG TCGGCCCCGT GACATCCCCA 1740
GGCCCTCTCC ACAGCCCCGG CTCCTCCAGT GATAGCAACG GGGGTGATGC AGAGGGGCCG 1800
GGGCCTCCTG CGCCAGTGAC TTTCCAGCAG ATCTGTAAGG ATGTGCATCT GGTGAAGCAC 1860
CAGGGCCAGC AGCTTTTTAT TGAGTCTCGG GCCCGGCCTC AGCCCCGGCC TCGCCTCCCT 1920
GCTACAGGCA CATTCAAGGC CAGGGCCCTT CCCTGCCAAT CCCCAGACCC AGAGCTGGAG 1980
ACGGGTTCTG CTCCCATCCC GGCCCCACTA GCCTTGGCCC CTGAGGAGGC CGAGAGGAAA 2040
GAAGCCTCCA GCTGCTCCTA CCAACAGATC AACTGCCTGG ACAGCATCCT CAGGTATCTG 2100
GAGAGCTGCA ACCTCCCCAG CACCACTAAG CGTAAATGTG CCTCCTCCTC CTCTTACACC 2160
ACCTCCTCAG CCTCTGACGA TGACAAGCAG AGGACCGGTC CAGTCCCTGT GGGGACCAAG 2220
AAAGATCCAC CGTCAGCAGT GCTGTCTGGG GAGGGGGCCA CCCCCCGGAA GGAGCCAGTG 2280
GTGGGAGGCA CCCTGAGCCC GCTCGCCCTG GCCAATAAGG CGGAGAGCGT GGTGTCCGTC 2340
ACCAGTCAGT GTAGCTTCAG CTCCACCATC GTCCATGTGG GAGACAAGAA GCCCCCGGAG 2400
TCGGACATCA TCATGATGGA GGACCTGCCT GGCCTAGCCC CCGGCCCAGC CCCCAGCCCA 2460
GCCCCCAGCC CCACAGTAGC CCCTGACCCA GCCCCAGATG CTTACCGTCC AGTAGGGCTG 2520
ACCAAGGCCG TGCTGTCCCT GCACACACAG AAGGAAGAGC AAGCCTTCCT CAGCCGCTTC 2580
CGAGACCTGG GCAGGCTGCG TGGACTTGAC AGCTCTTCCA CAGCGCCCTC AGCCCTTGGC 2640
GAGCGAGGCT GCCACCACGG CCCCGCACCC CCAAGCCGCC GACACCACTG CCGATCCAAA 2700
GCCAAGCGCT CACGCCACCA CCAGAACCCT CGGGCTGAAG CGCCCTGCTA CGTCTCACAC 2760
CCCTCACCTG TGCCACCCTC CACCCCCTGG CCTGCCCCAC CAGCCACTAC CCACTTCCCA 2820
GCAGTTGTCC AGCCCTACCC TCTCCCAGTG TTCTCCCCTC GAGGAGGCCC CCAGCCTCTT 2880
CCCCCTGCTC CCACATCTGT GCCCCAGGCT GCTTTCCCCA CCCCTCTGGT AACCCCAATG 2940
GTGGCCTTGG TGCTCCCTAA CTATCTGTTC CCAACCCCAT CCAGCTATCC TTACGGGGCA 3000
CCCCAGACCC CTGCTGAAGG GCCTCCCACT CCTGCCTCGT ACTCCCCTTC TCCATCCTTG 3060
CCCGCCCTCC CCCCAAGCCC TCCTCGACGC CCGGACTCTC CACTGTTCAA CTCAAGATGC 3120
AGCTCTCCAC TCCAGCTCAA TCTGCTGCAG CTCGAGGAGC TCCCCCGTGC TGAGGGGGCT 3180
GCTGGTGCAG GGGGCCCTGG GAGCAGTGCT GGGCCCCCAC CTCCCAGTGA GGAGGCTGCT 3240
GAGCCAGAGG CCAGACTGGT GGAGGTCACT GAGTCCTCCA ATCAGGACGC ACTTTCCGGC 3300
TCCAGCGACC TGCTGGAACT GCTCCTGCAA GCGGACTCGC GCTCCGGCAC AGGCTCCGCA 3360
GCCTCGGGCT CCTTGGGCTC TGGCTTGGGC TCTGGGTCTG GTTCAGGCTC CCATGAGGGG 3420
GGCAGCACCT CAGCCAGCAT CACTCGCAGC AGCCAGAGCA GCCACACAAG CAAATACTTT 3480
GGCAGCATCG ACTCTTCCGA GGCTGAGGCT GGGGCTGCTC GGGGCGGGGC TGAGCCGGGG 3540
GACCAGGTGA TTAAGTACGT GCTCCAGGAT CCCATTTGGC TGCTCATGGC CAATGCTGAC 3600
CAGCGCGTCA TGATGACTTA CCAGGTACCC TCCAGGGACA TGACCTCTGT GCTGAAGCAG 3660
GATCGGGAGC GGCTCCGAGC CATGCAGAGG CAGCAGCCCC GGTTTTCTGA GGACCAGCGG 3720
CGGGAACTGG GCGCTGTGCA CTCCTGGGTC CGCAAGGGCC AACTGCCTCG GGCTCTTGAT 3780
GTGATGGCCT GTGTGGACTG TGGGAGCAGC ACCCAAGATC CTGGTCACCC TGATGACCCA 3840
CTCTTCTCAG AGCTGGATGG ACTGGGGCTG GAGCCCATGG AAGAGGGTGG AGGCGAGCAG 3900
GGCAGCTGCG GTGGCGGCAG TGGTGAGGGT GAGGGCTGTG ACGAGGCCCG GGCCCAACGT 3960
GGGGCCAAGG CCTCAAGCTC TCAGGACTTG GCCATGGAGG AGGAGAAAGA AGGCAGGAGC 4020
TCAGCCAGTC CAGCCTTACC TACAGCAGGA AACGGCACGA GCTAGACTCC ATTCTGGGAC 4080
CATCTCCAGG AGTCCACAAG ATGCTTTCTT CTCCTATGTC CCAATTCTCA GAACTCAGAT 4140
GTGGCTGGAC CAACCAGTGG GAAACTGCCC CAGCTTCTCC CACCATAGGG GGCCGGACCC 4200
CCATCACCAG CCCAGGATCC AGGGGCTGCC TCTGGCCTCG TAGGGAGCAG AGAGCAGAAC 4260
TCCGCAGCCC AGCCCAGCCC AGAGGAGTGT CACCTCCCAC CTTTGGAGAG GAATCCTTCC 4320
CTCCCCTGGA CAGAGTTGCT GACAGGCTGC TGAAGTGGCC TCTCCATATC CCAGCTGAGC 4380
CTGAATCCGA CTCCTGAGGG TTGGGGCTGC ACTTATTTAT CGGGGGAGAC AGCTGTCTCT 4440
CCCACCTCCT CCCCAGATGG GAGGAGAGCC TGAGGCCCAA GCAGGACCTG GGGGATCCAG 4500
CCCCTAGCTG CTCGGGGGTG GGGGAGGTTG GTGGACCATG GAGTCCCTGG TGCTGCCCCT 4560
CAGGTGGGAC CCAGGTGTTC TCAGCTGTAC CCTCTGCCGA TGGCATTTGT GTTTTTGATA 4620
TTTGTGTCTG TTACTACTTT TTTAATACAA AAAGATAAAA ACGGCCAGGA CTTTGTGGAA 4680
TGAAGTTTGG GGTTGGGGTG AGGGGAGCGC GTCGAGGAGG GACTCGGCCC TGCTTCCGGG 4740
AAGGTTGTAG TGAGGGTGCA CAGGGCCATG CCCTGAAGAC C 4781
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-EqC-020994Equus caballus62.29 0.00e+00 1487.6
CGD-GaM-021007Gadus morhua54.28 3.00e-176 616.3
CGD-HoS-021038Homo sapiens (Human)65.87 0.00e+00 1600.9
CGD-OvA-022197Ovis aries61.22 0.00e+00 1454.9
CGD-RaN-021793Rattus norvegicus63.47 0.00e+00 1464.1
Gene Ontology

GO:0005515--protein binding
GO:0004871--signal transducer activity
GO:0007165--signal transduction
GO:0005737--cytoplasm
GO:0000978--RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0031625--ubiquitin protein ligase binding
GO:0007623--circadian rhythm
GO:0043967--histone H4 acetylation
GO:0032922--circadian regulation of gene expression
GO:0042634--regulation of hair cycle
GO:0070888--E-box binding
GO:0019900--kinase binding
GO:0043966--histone H3 acetylation
GO:0005634--nucleus
GO:0045944--positive regulation of transcription from RNA polymerase II promoter
GO:0008134--transcription factor binding
GO:0045892--negative regulation of transcription, DNA-templated
GO:0000122--negative regulation of transcription from RNA polymerase II promoter
GO:0000989--transcription factor activity, transcription factor binding
GO:0010608--posttranscriptional regulation of gene expression
GO:0070932--histone H3 deacetylation
GO:0051591--response to cAMP
GO:0000976--transcription regulatory region sequence-specific DNA binding
GO:0031490--chromatin DNA binding
GO:0002028--regulation of sodium ion transport
GO:0042752--regulation of circadian rhythm
GO:2000323--negative regulation of glucocorticoid receptor signaling pathway
GO:0009416--response to light stimulus
GO:0043153--entrainment of circadian clock by photoperiod
GO:0097167--circadian regulation of translation