CGDB Gene Information

Tag Content
CGDB ID CGD-NoL-039781
Ensembl Accession ENSNLEP00000012055.1
Protein Name PER1
Ensembl Information ENSNLEG00000009876; ENSNLET00000012643
Organism Nomascus leucogenys
NCBI Taxa ID 61853
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
CT 0 CT 12 DD2 5.8 gluteal muscles Predicted from orthologs F7AU00
ZT 19 ZT 7 LD 2 muscle Predicted from orthologs H8ZXB9
ZT 4 ZT 21 LD 2 human HaCaT keratinocytes Predicted from orthologs O15534
CT 0 CT 12 DD2 4 U2OS cells Predicted from orthologs O15534
ZT 0 ZT 12 LD 2 muscle Predicted from orthologs W5QC67
ZT 4 ZT 0 LD 5 SCN Predicted from orthologs W5QC67
ZT 12 ZT 0 LD 30 abdominal adipose tissue Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 11 basolateral nucleus of the amygdala Predicted from orthologs Q8CHI5
CT 12 CT 20 DD17 6.25 colon Predicted from orthologs Q8CHI5
ZT 18 ZT 6 LD 2 decidua Predicted from orthologs Q8CHI5
ZT 4 ZT 16 LD 3.5 entral nucleus of the amygdala Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 8 hippocampus Predicted from orthologs Q8CHI5
ZT 9 ZT 0 LD 48 intestinal jejunal mucosa Predicted from orthologs Q8CHI5
CT 12 CT 0 DD17 16.67 liver Predicted from orthologs Q8CHI5
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q8CHI5
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 7 nucleus accumbens shell Predicted from orthologs Q8CHI5
CT 20 CT 0 DD1 1.71 PC12 cell Predicted from orthologs Q8CHI5
ZT 0 ZT 16 LD 7.5 prefrontal cortex Predicted from orthologs Q8CHI5
ZT 4 ZT 16 LD 3 SCN Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 15 SCN Predicted from orthologs Q8CHI5
ZT 4 ZT 20 LD 3 SCN Predicted from orthologs Q8CHI5
ZT 8 ZT 0 LD 4.76 uteri Predicted from orthologs Q8CHI5
ZT 8 ZT 20 LD 7 ventral tegmental area Predicted from orthologs Q8CHI5
Descriptionperiod circadian clock 1 [Source:HGNC Symbol;Acc:HGNC:8845](View all)
Protein Sequence
(Fasta)		 MSGPLEGADG GGDPRPGESF CPGGVPSPGP PQHRPCPGPS LADDTDANSN GSSGNESNGH 60
ESRGASQRSS HSSSSGNGKD SALLETTESS KSTNSQSPSP PSSSIAYSLL SASSEQDNPS 120
TSGCSSEQSA RARTQKELMT ALRELKLRLP PERRGKGRSG TLATLQYALA CVKQVQANQE 180
YYQQWSLEEG EPCSMDMSTY TLEELEHITS EYTLRNQDTF SVAVSFLTGR IVYISEQAAV 240
LLRCKRDVFR GTRFSELLAP QDVGVFYGST APSRLPTWGT GASAGSGLRD FTQEKSVFCR 300
IRGGPDRDPG PRYQPFRLTP YVTKIRVSDG APAQPCCLLI AERIHSGYEA PRIPPDKRIF 360
TTRHTPSCLF QDVDERAAPL LGYLPQDLLG APVLLFLHPE DRPLMLAIHK KILQLAGQPF 420
DHSPIRFCAR NGEYVTMDTS WAGFVHPWSR KVAFVLGRHK VRTAPLNEDV FTPPAPSPVP 480
SLDTDIQELS EQIHRLLLQP VHSPSPTGLC GVGPVTSPGP LHSPGSSSDS NGGDAGPGPP 540
APVTFQQICK DVHLVKHQGQ QLFIESRARP QPRPRLPATG TFKAKVLPCQ SPDPELETGS 600
APIQAPLALA PEEAERKEAS SCSYQQINCL DSILRYLESC NLPSTTKRKC ASSSSCTTSS 660
ASDDDKQRTG PVSVGTKKDP PSAVLSGEGA TPRKEPVVGG TLSPLALANK AESVVSVTSQ 720
CSFSSTIVHV GDKKPPESDI IMMEDLPGLA PGPAPSPTVA PDPAPDAYRP VGLTKAVLSL 780
HTQKEEQAFL SRFENGQGAG LDSFFTVPSA LGERGCHHGP APPSRRHHCR SKAKRSRHHQ 840
NPRAEAPCYV SHPSPVPPST PWPTPPATTP FPAVVQPYPL PVFSPRGGPQ PLPPAPTSVP 900
PAAFPAPLVT PMVALVLPNY LFPTPSSYPY GALQTPAEGP PTPASHSPSP SLPALPPSPP 960
QRPDSPLFNS RCSSPLQLNL LQLEELPRAE GAAVAGGPGS SAGPPPPSEE AAEPEARLVE 1020
VTESSNQDAL SGSSDLLELL LQEDSRSGTG SAASGSLGSG LGSGSGSGSH EGGSTSASIT 1080
RSSQSSHTSK YFGSIDSSEA EAGAARGGAE PGDQVIKYVL QDPIWLLMAN ADQRVMMTYQ 1140
VPSRDVTSVL KQDRERLRAM QKQQPRFSED QRRELGAVHS WVRKGQLPRA LDVMACVDCG 1200
SSTQDHGHPD DPLFSELDGL GLEPMEEGGG EQGSSGGGSG EGEGCEEAQG GAKASSSPDL 1260
AMEEEEDRSS SRPALPTAGN CAS 1283
Nucleotide Sequence
(Fasta)		 ATTATGCAAC CCGCCTCCCC GCCCGGTGGA GCTTCCACTC GGCTGCAGGC TGGAGCGGCG 60
GCGGGCAGGC GGGCGGAGGA CACTCCTGCG ACCAGGTACT GGCTGTGATC GAACTTCTCA 120
ACCCTCAGAG ACAGATCGTC CATCTCACTC CCTCAGCCAG GCCTCCAGGC CCCCTTGTGC 180
ATCCGTGGTG GCCTCTCTGC CTTCTCTGTT CTGTTCTCCC CATGGCCCAG ACATGAGTGG 240
CCCCCTAGAA GGGGCTGATG GGGGAGGGGA CCCCAGGCCT GGGGAATCAT TTTGTCCTGG 300
GGGCGTCCCA TCGCCTGGGC CCCCACAGCA CCGGCCTTGC CCAGGCCCCA GCCTGGCCGA 360
TGACACCGAT GCCAACAGCA ATGGTTCAAG CGGCAATGAG TCCAACGGGC ATGAGTCTAG 420
AGGCGCATCT CAGCGGAGCT CACACAGCTC CTCCTCGGGC AACGGCAAGG ACTCAGCCCT 480
TCTGGAGACC ACTGAGAGCA GCAAGAGCAC AAACTCTCAG AGCCCATCCC CACCCAGCAG 540
TTCCATTGCC TACAGCCTCC TGAGTGCCAG CTCAGAGCAG GACAACCCAT CCACCAGTGG 600
CTGCAGCAGT GAACAGTCAG CCCGGGCGAG GACCCAGAAG GAACTCATGA CAGCACTTCG 660
AGAGCTCAAG CTTCGACTGC CGCCAGAGCG CCGGGGCAAG GGCCGCTCTG GGACCCTGGC 720
CACGCTGCAG TACGCACTGG CCTGTGTCAA GCAGGTGCAG GCCAACCAGG AATACTACCA 780
GCAGTGGAGC CTGGAGGAGG GTGAGCCTTG CTCCATGGAC ATGTCCACCT ATACGCTAGA 840
GGAGCTGGAG CACATCACGT CTGAGTACAC GCTTCGGAAC CAGGATACCT TCTCAGTGGC 900
TGTCTCCTTC CTGACCGGCC GAATCGTCTA CATTTCGGAG CAGGCAGCTG TCCTGCTGCG 960
TTGCAAGCGG GACGTGTTCC GGGGTACCCG CTTCTCTGAG CTCCTGGCTC CCCAGGATGT 1020
GGGAGTCTTC TATGGTTCCA CTGCTCCATC TCGTCTGCCC ACCTGGGGCA CAGGGGCCTC 1080
AGCAGGTTCA GGCCTCAGGG ACTTTACCCA GGAGAAGTCC GTCTTCTGCC GTATCAGAGG 1140
AGGTCCTGAC CGGGATCCAG GGCCTCGGTA CCAGCCATTC CGCCTAACCC CGTATGTGAC 1200
CAAGATCCGG GTCTCAGATG GGGCCCCTGC ACAGCCGTGC TGCCTGCTGA TTGCAGAGCG 1260
CATCCATTCG GGTTACGAAG CTCCCCGGAT ACCCCCCGAC AAGAGGATTT TCACTACGCG 1320
GCACACACCC AGCTGCCTCT TCCAGGATGT GGATGAAAGG GCTGCCCCCC TGCTGGGCTA 1380
CCTGCCCCAG GACCTCCTGG GAGCCCCAGT GCTCCTGTTC CTGCATCCTG AGGACCGACC 1440
CCTCATGCTG GCTATCCACA AGAAGATCCT GCAGTTGGCG GGCCAGCCCT TTGACCACTC 1500
CCCTATCCGC TTCTGTGCCC GCAACGGGGA GTATGTCACC ATGGACACCA GCTGGGCTGG 1560
CTTTGTGCAC CCGTGGAGCC GCAAGGTAGC CTTCGTGTTG GGCCGCCACA AAGTACGCAC 1620
GGCCCCCCTG AATGAGGACG TATTCACTCC CCCGGCCCCC AGCCCAGTTC CATCCCTGGA 1680
CACTGATATC CAGGAGCTGT CAGAGCAGAT CCACCGGCTG CTGCTGCAGC CCGTGCACAG 1740
CCCCAGCCCC ACAGGACTCT GTGGAGTCGG CCCCGTGACA TCACCAGGCC CTCTCCACAG 1800
CCCTGGGTCC TCCAGTGATA GCAACGGGGG TGATGCAGGG CCTGGGCCTC CTGCGCCGGT 1860
GACTTTCCAG CAGATCTGTA AGGATGTGCA TCTGGTGAAG CACCAGGGCC AGCAGCTTTT 1920
TATTGAGTCT CGGGCCCGGC CTCAGCCCCG GCCCCGCCTC CCTGCTACAG GCACATTCAA 1980
GGCCAAGGTC CTTCCCTGCC AATCCCCAGA CCCAGAGCTG GAGACGGGTT CTGCTCCCAT 2040
CCAGGCCCCA CTAGCCTTGG CCCCTGAGGA GGCTGAGAGG AAAGAAGCCT CTAGCTGCTC 2100
CTACCAACAG ATCAACTGCC TGGACAGCAT CCTCAGGTAC CTGGAGAGCT GCAACCTCCC 2160
CAGCACCACT AAGCGTAAAT GTGCCTCCTC CTCCTCCTGT ACCACCTCCT CAGCCTCTGA 2220
CGACGACAAG CAGAGGACAG GTCCAGTCTC TGTGGGGACC AAGAAAGATC CGCCGTCAGC 2280
AGTGCTGTCT GGGGAGGGGG CCACCCCACG GAAGGAGCCA GTGGTGGGAG GCACCCTGAG 2340
CCCGCTCGCC CTGGCCAATA AGGCGGAGAG CGTGGTGTCC GTCACCAGTC AGTGTAGCTT 2400
CAGCTCCACC ATCGTCCATG TGGGAGACAA GAAGCCCCCG GAGTCGGACA TCATCATGAT 2460
GGAGGACCTG CCTGGCCTAG CCCCAGGCCC AGCCCCCAGC CCTACAGTAG CCCCTGACCC 2520
AGCCCCAGAT GCCTACCGTC CAGTGGGGCT GACCAAGGCC GTGCTGTCCC TGCACACTCA 2580
GAAAGAAGAG CAAGCCTTCC TCAGCCGATT CGAGAATGGG CAGGGTGCGG GACTCGACAG 2640
CTTTTTCACA GTTCCCTCAG CCCTTGGCGA GCGAGGCTGC CACCACGGCC CCGCACCCCC 2700
AAGCCGCCGA CACCACTGCC GATCCAAAGC CAAGCGCTCA CGCCACCACC AGAACCCTCG 2760
GGCTGAAGCG CCCTGCTATG TCTCACACCC CTCACCCGTG CCACCCTCCA CCCCCTGGCC 2820
CACCCCACCA GCCACTACCC CCTTCCCAGC GGTTGTCCAG CCCTACCCTC TCCCAGTGTT 2880
CTCTCCTCGA GGAGGCCCCC AGCCTCTTCC CCCTGCTCCC ACATCTGTGC CCCCGGCTGC 2940
TTTCCCTGCC CCTTTGGTGA CCCCAATGGT GGCCTTGGTG CTCCCTAACT ATCTGTTCCC 3000
AACCCCATCC AGCTATCCTT ATGGGGCACT CCAGACCCCT GCTGAAGGGC CTCCCACTCC 3060
TGCCTCGCAC TCCCCTTCTC CATCCTTGCC CGCCCTCCCC CCCAGCCCTC CTCAGCGCCC 3120
GGACTCTCCA CTGTTCAACT CGAGATGCAG CTCTCCACTC CAGCTCAATC TGCTGCAGCT 3180
CGAGGAGCTC CCCCGTGCTG AGGGGGCTGC TGTTGCAGGG GGCCCTGGGA GCAGTGCCGG 3240
GCCCCCACCT CCCAGTGAGG AGGCTGCTGA GCCAGAGGCC AGACTGGTGG AGGTCACTGA 3300
GTCCTCCAAT CAGGACGCAC TTTCCGGCTC CAGTGACCTG CTGGAACTTC TGCTGCAAGA 3360
GGACTCGCGC TCCGGCACAG GCTCCGCAGC CTCGGGCTCC TTGGGCTCTG GCTTGGGCTC 3420
TGGGTCTGGT TCAGGCTCCC ATGAGGGGGG CAGCACCTCA GCCAGCATCA CTCGCAGCAG 3480
CCAGAGCAGC CACACAAGCA AATACTTTGG CAGCATCGAC TCTTCCGAGG CTGAGGCTGG 3540
GGCTGCTCGG GGCGGGGCTG AGCCTGGGGA CCAGGTGATT AAGTACGTGC TCCAGGATCC 3600
CATTTGGCTG CTCATGGCCA ATGCTGACCA GCGCGTCATG ATGACCTACC AGGTGCCCTC 3660
CAGGGACGTG ACCTCTGTGC TGAAGCAGGA TCGGGAGCGG CTCCGAGCCA TGCAGAAGCA 3720
GCAGCCTCGG TTTTCTGAGG ACCAGCGGCG GGAACTGGGC GCTGTGCACT CCTGGGTCCG 3780
GAAGGGCCAA CTGCCTCGGG CTCTTGATGT GATGGCCTGT GTGGACTGTG GGAGCAGCAC 3840
CCAAGATCAT GGTCACCCTG ATGACCCACT CTTCTCAGAG CTGGATGGAC TGGGGCTGGA 3900
GCCCATGGAA GAGGGTGGAG GCGAGCAGGG CAGCAGCGGT GGCGGCAGTG GTGAGGGTGA 3960
GGGCTGCGAG GAGGCCCAAG GCGGGGCCAA GGCTTCAAGC TCTCCGGACT TGGCCATGGA 4020
GGAGGAGGAA GACAGGAGCT CATCCCGTCC AGCCTTACCT ACAGCAGGAA ACTGCGCCAG 4080
CTAGACTCTA TTCTGGGCCA TCTCCAGGAG TCCACGCGAG GCTTTCTTCT CTTATGTCCC 4140
AATTCTCAGA ACTCAGATGT GGCTAGACCA ACCGGTGGGA ACTGCCCCAG CTTCTCCCAG 4200
CATAGGGGGC CGGACCCCCA TCACCAGCGA ATTCCACCAC ATTGGAGCCT CTGGCCTCTT 4260
AGGGAAGCAG AAAAGCAGAA CTCCACAGCC CAGCCCAGAG GAGTGTCACC TCCCACCTTT 4320
GGAGAGGAAT CCTTCCCTCC CCTGGACAAA GTTGCTGACA AGCTGCTGAA GTGGCCTCTC 4380
CGTATTTCAG CTGAGCCTGA ATCCGACTCC TGAGGGTTGG GGCTACACTT ATTTATTGGG 4440
GGAGACAGCT CTCTCTCCCA CCTCCTCCCC AGACGGGAGG AGAGCCTGAG GCTCAGGCAG 4500
GACCCGGGGG TTCCAGCCCC TAGCTGCTCT CGGGTGGGGG AGGTTGGTGG ACCATGGAGT 4560
CCCTGGTGCT GCCCCTCAGG TGGGACCCAG GCGTTCTCAG CTGTACCCTC TGCCAGTGGC 4620
ATTTGTGTTT TTGATATTTG TGTCTGTTAC TACTTTTTTA ATACAAAAAG ATAAAATCGC 4680
CC 4682
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-EqC-020994Equus caballus62.93 0.00e+00 1481.8
CGD-GaM-021007Gadus morhua54.74 0.00e+00 632.1
CGD-HoS-021038Homo sapiens (Human)66.67 0.00e+00 1611.7
CGD-OvA-022197Ovis aries65.17 0.00e+00 1473.4
CGD-RaN-021793Rattus norvegicus64.7 0.00e+00 1480.7
Gene Ontology

GO:0043966--histone H3 acetylation
GO:0019900--kinase binding
GO:0070888--E-box binding
GO:0042634--regulation of hair cycle
GO:0032922--circadian regulation of gene expression
GO:0043967--histone H4 acetylation
GO:0007623--circadian rhythm
GO:0031625--ubiquitin protein ligase binding
GO:0000978--RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0005737--cytoplasm
GO:0005515--protein binding